RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 TAS2R8Q9NYW2 309 aa8.85□□□□□ -0.99
YBX3-216ENST00000544622 A3GALT2U3KPV4 340 aa8.85□□□□□ -0.99
YBX3-216ENST00000544622 TNCP24821 2201 aa8.85□□□□□ -0.99
YBX3-216ENST00000544622 SMIM31A0A1B0GVY4 71 aa8.84□□□□□ -0.99
YBX3-216ENST00000544622 H3BUA1 57 aa8.84□□□□□ -0.99
YBX3-216ENST00000544622 SULT1C2O00338 296 aa8.84□□□□□ -0.99
YBX3-216ENST00000544622 RBFOX2O43251 390 aaKnown RBP eCLIP8.84□□□□□ -0.99
YBX3-216ENST00000544622 TPPPO94811 219 aa8.84□□□□□ -0.99
YBX3-216ENST00000544622 IL6RP08887 468 aaPredicted RBP8.84□□□□□ -0.99
YBX3-216ENST00000544622 RPL5P46777 297 aaKnown RBP8.84□□□□□ -0.99
YBX3-216ENST00000544622 GNB1P62873 340 aa8.84□□□□□ -0.99
YBX3-216ENST00000544622 MZT2AQ6P582 158 aa8.84□□□□□ -0.99
YBX3-216ENST00000544622 SECTM1Q8WVN6 248 aa8.84□□□□□ -0.99
YBX3-216ENST00000544622 AP3S1Q92572 193 aa8.84□□□□□ -0.99
YBX3-216ENST00000544622 MOB3AQ96BX8 217 aa8.84□□□□□ -0.99
YBX3-216ENST00000544622 BCL7BQ9BQE9 202 aa8.84□□□□□ -0.99
YBX3-216ENST00000544622 MCRIP2Q9BUT9 160 aaKnown RBP8.84□□□□□ -0.99
YBX3-216ENST00000544622 ZNF430Q9H8G1 570 aaPredicted RBP8.84□□□□□ -0.99
YBX3-216ENST00000544622 IFT46Q9NQC8 304 aa8.84□□□□□ -0.99
YBX3-216ENST00000544622 AURKAIP1Q9NWT8 199 aaPredicted RBP8.84□□□□□ -0.99
YBX3-216ENST00000544622 MRPS7Q9Y2R9 242 aaKnown RBP8.84□□□□□ -0.99
YBX3-216ENST00000544622 MSGN1A6NI15 193 aa8.83□□□□□ -1
YBX3-216ENST00000544622 TNFSF12O43508 249 aa8.83□□□□□ -1
YBX3-216ENST00000544622 RAMP3O60896 148 aa8.83□□□□□ -1
YBX3-216ENST00000544622 CNIH1O95406 144 aa8.83□□□□□ -1
YBX3-216ENST00000544622 PMP2P02689 132 aa8.83□□□□□ -1
YBX3-216ENST00000544622 HRH1P35367 487 aa8.83□□□□□ -1
YBX3-216ENST00000544622 TMBIM6P55061 237 aa8.83□□□□□ -1
YBX3-216ENST00000544622 TAS2R46P59540 309 aa8.83□□□□□ -1
YBX3-216ENST00000544622 POU2AF1Q16633 256 aa8.83□□□□□ -1
YBX3-216ENST00000544622 OR2B11Q5JQS5 317 aa8.83□□□□□ -1
YBX3-216ENST00000544622 SNX29P2Q8IUI4 249 aa8.83□□□□□ -1
YBX3-216ENST00000544622 VKORC1L1Q8N0U8 176 aa8.83□□□□□ -1
YBX3-216ENST00000544622 POC5Q8NA72 575 aa8.83□□□□□ -1
YBX3-216ENST00000544622 OR1N2Q8NGR9 330 aa8.83□□□□□ -1
YBX3-216ENST00000544622 OR4S2Q8NH73 311 aa8.83□□□□□ -1
YBX3-216ENST00000544622 GRPEL2Q8TAA5 225 aa8.83□□□□□ -1
YBX3-216ENST00000544622 TMEM167AQ8TBQ9 72 aa8.83□□□□□ -1
YBX3-216ENST00000544622 DYNC2LI1Q8TCX1 351 aa8.83□□□□□ -1
YBX3-216ENST00000544622 ABHD5Q8WTS1 349 aa8.83□□□□□ -1
YBX3-216ENST00000544622 RAB2BQ8WUD1 216 aa8.83□□□□□ -1
YBX3-216ENST00000544622 TCTEX1D2Q8WW35 142 aa8.83□□□□□ -1
YBX3-216ENST00000544622 SRSF12Q8WXF0 261 aaKnown RBP8.83□□□□□ -1
YBX3-216ENST00000544622 MS4A10Q96PG2 267 aa8.83□□□□□ -1
YBX3-216ENST00000544622 ABHD1Q96SE0 405 aa8.83□□□□□ -1
YBX3-216ENST00000544622 ZNF2Q9BSG1 426 aaPredicted RBP8.83□□□□□ -1
YBX3-216ENST00000544622 SLC5A7Q9GZV3 580 aa8.83□□□□□ -1
YBX3-216ENST00000544622 ALX4Q9H161 411 aaPredicted RBP8.83□□□□□ -1
YBX3-216ENST00000544622 MIXL1Q9H2W2 232 aa8.83□□□□□ -1
YBX3-216ENST00000544622 EHFQ9NZC4 300 aa8.83□□□□□ -1
YBX3-216ENST00000544622 E7EUB6 86 aa8.82□□□□□ -1
YBX3-216ENST00000544622 RBMXL2O75526 392 aaKnown RBP8.82□□□□□ -1
YBX3-216ENST00000544622 PGLYRP1O75594 196 aaPredicted RBP8.82□□□□□ -1
YBX3-216ENST00000544622 KBTBD11O94819 623 aa8.82□□□□□ -1
YBX3-216ENST00000544622 OR2A4O95047 310 aa8.82□□□□□ -1
YBX3-216ENST00000544622 LGALS1P09382 135 aaKnown RBP8.82□□□□□ -1
YBX3-216ENST00000544622 HLA-DMAP28067 261 aa8.82□□□□□ -1
YBX3-216ENST00000544622 CD40LGP29965 261 aa8.82□□□□□ -1
YBX3-216ENST00000544622 FXYD4P59646 89 aa8.82□□□□□ -1
YBX3-216ENST00000544622 ZNF616Q08AN1 781 aa8.82□□□□□ -1
YBX3-216ENST00000544622 CLVS1Q8IUQ0 354 aaPredicted RBP8.82□□□□□ -1
YBX3-216ENST00000544622 MMD2Q8IY49 270 aa8.82□□□□□ -1
YBX3-216ENST00000544622 SPAG16Q8N0X2 631 aa8.82□□□□□ -1
YBX3-216ENST00000544622 ADAD2Q8NCV1 583 aaKnown RBP8.82□□□□□ -1
YBX3-216ENST00000544622 OR5T1Q8NG75 326 aa8.82□□□□□ -1
YBX3-216ENST00000544622 OR5H2Q8NGV7 314 aa8.82□□□□□ -1
YBX3-216ENST00000544622 OR6F1Q8NGZ6 308 aa8.82□□□□□ -1
YBX3-216ENST00000544622 VSTM2AQ8TAG5 236 aa8.82□□□□□ -1
YBX3-216ENST00000544622 OR5B12Q96R08 314 aa8.82□□□□□ -1
YBX3-216ENST00000544622 OR2A7Q96R45 310 aa8.82□□□□□ -1
YBX3-216ENST00000544622 DCUN1D5Q9BTE7 237 aa8.82□□□□□ -1
YBX3-216ENST00000544622 GPR61Q9BZJ8 451 aa8.82□□□□□ -1
YBX3-216ENST00000544622 TINAGL1Q9GZM7 467 aaPredicted RBP8.82□□□□□ -1
YBX3-216ENST00000544622 KLK11Q9UBX7 282 aa8.82□□□□□ -1
YBX3-216ENST00000544622 SCOCQ9UIL1 159 aa8.82□□□□□ -1
YBX3-216ENST00000544622 TRBV9A0A0B4J1U6 114 aa8.81□□□□□ -1
YBX3-216ENST00000544622 A0A1B0GW64 132 aa8.81□□□□□ -1
YBX3-216ENST00000544622 TEX22C9J3V5 150 aa8.81□□□□□ -1
YBX3-216ENST00000544622 CTDSP2O14595 271 aa8.81□□□□□ -1
YBX3-216ENST00000544622 HPRT1P00492 218 aa8.81□□□□□ -1
YBX3-216ENST00000544622 HRASP01112 189 aa8.81□□□□□ -1
YBX3-216ENST00000544622 HSPB1P04792 205 aaKnown RBP8.81□□□□□ -1
YBX3-216ENST00000544622 FGF2P09038 288 aa8.81□□□□□ -1
YBX3-216ENST00000544622 OR8U8P0C7N1 319 aa8.81□□□□□ -1
YBX3-216ENST00000544622 HOXD3P31249 432 aaPredicted RBP8.81□□□□□ -1
YBX3-216ENST00000544622 RCVRNP35243 200 aa8.81□□□□□ -1
YBX3-216ENST00000544622 KIR2DS2P43631 304 aa8.81□□□□□ -1
YBX3-216ENST00000544622 TPPP2P59282 170 aa8.81□□□□□ -1
YBX3-216ENST00000544622 TAS2R31P59538 309 aa8.81□□□□□ -1
YBX3-216ENST00000544622 TNXAQ16473 311 aa8.81□□□□□ -1
YBX3-216ENST00000544622 KLK9Q2XQG4 91 aa8.81□□□□□ -1
YBX3-216ENST00000544622 VAX1Q5SQQ9 334 aa8.81□□□□□ -1
YBX3-216ENST00000544622 AADACL3Q5VUY0 350 aa8.81□□□□□ -1
YBX3-216ENST00000544622 TMEM17Q86X19 198 aa8.81□□□□□ -1
YBX3-216ENST00000544622 TTC9CQ8N5M4 171 aa8.81□□□□□ -1
YBX3-216ENST00000544622 BORCS5Q969J3 196 aa8.81□□□□□ -1
YBX3-216ENST00000544622 PLEKHA2Q9HB19 425 aa8.81□□□□□ -1
YBX3-216ENST00000544622 BET1LQ9NYM9 111 aa8.81□□□□□ -1
YBX3-216ENST00000544622 EXTL2Q9UBQ6 330 aa8.81□□□□□ -1
YBX3-216ENST00000544622 KLK9Q9UKQ9 250 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms