RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 TANC2Q9HCD6 1990 aa13.13□□□□□ -0.31
SNRNP70-203ENST00000544278 OR9G9P0C7N8 305 aa13.13□□□□□ -0.31
SNRNP70-203ENST00000544278 TRGC1P0CF51 173 aa13.13□□□□□ -0.31
SNRNP70-203ENST00000544278 LINC00596Q86U02 117 aa13.13□□□□□ -0.31
SNRNP70-203ENST00000544278 Q8IYB0 196 aa13.13□□□□□ -0.31
SNRNP70-203ENST00000544278 HIST3H2BBQ8N257 126 aa13.13□□□□□ -0.31
SNRNP70-203ENST00000544278 ZADH2Q8N4Q0 377 aa13.13□□□□□ -0.31
SNRNP70-203ENST00000544278 FRZBQ92765 325 aa13.13□□□□□ -0.31
SNRNP70-203ENST00000544278 RAB40CQ96S21 281 aa13.13□□□□□ -0.31
SNRNP70-203ENST00000544278 TET2Q6N021 2002 aaPredicted RBP13.13□□□□□ -0.31
SNRNP70-203ENST00000544278 TRBV6-6A0A0A6YYG2 114 aa13.13□□□□□ -0.31
SNRNP70-203ENST00000544278 IFNA10P01566 189 aa13.13□□□□□ -0.31
SNRNP70-203ENST00000544278 UBE2G2P60604 165 aa13.13□□□□□ -0.31
SNRNP70-203ENST00000544278 MAJINQ3KP22 176 aa13.13□□□□□ -0.31
SNRNP70-203ENST00000544278 H2BFWTQ7Z2G1 175 aa13.13□□□□□ -0.31
SNRNP70-203ENST00000544278 ZNF664Q8N3J9 261 aa13.13□□□□□ -0.31
SNRNP70-203ENST00000544278 ZNF645Q8N7E2 425 aa13.13□□□□□ -0.31
SNRNP70-203ENST00000544278 FAM122AQ96E09 287 aa13.13□□□□□ -0.31
SNRNP70-203ENST00000544278 WIPI2Q9Y4P8 454 aa13.13□□□□□ -0.31
SNRNP70-203ENST00000544278 BATFQ16520 125 aa13.12□□□□□ -0.31
SNRNP70-203ENST00000544278 RPP25LQ8N5L8 163 aaKnown RBP13.12□□□□□ -0.31
SNRNP70-203ENST00000544278 GNPNAT1Q96EK6 184 aaPredicted RBP13.12□□□□□ -0.31
SNRNP70-203ENST00000544278 CBLN4Q9NTU7 201 aa13.12□□□□□ -0.31
SNRNP70-203ENST00000544278 ARHGAP32A7KAX9 2087 aa13.12□□□□□ -0.31
SNRNP70-203ENST00000544278 IFNL4K9M1U5 179 aa13.12□□□□□ -0.31
SNRNP70-203ENST00000544278 AQP7O14520 342 aa13.12□□□□□ -0.31
SNRNP70-203ENST00000544278 COX5AP20674 150 aa13.12□□□□□ -0.31
SNRNP70-203ENST00000544278 PAX6P26367 422 aa13.12□□□□□ -0.31
SNRNP70-203ENST00000544278 MDH2P40926 338 aaKnown RBP13.12□□□□□ -0.31
SNRNP70-203ENST00000544278 DLX1P56177 255 aa13.12□□□□□ -0.31
SNRNP70-203ENST00000544278 KDF1Q8NAX2 398 aaPredicted RBP13.12□□□□□ -0.31
SNRNP70-203ENST00000544278 LHX4Q969G2 390 aa13.12□□□□□ -0.31
SNRNP70-203ENST00000544278 OOEPA6NGQ2 149 aa13.11□□□□□ -0.31
SNRNP70-203ENST00000544278 NUTF2P61970 127 aaKnown RBP13.11□□□□□ -0.31
SNRNP70-203ENST00000544278 GUSBP1Q15486 140 aa13.11□□□□□ -0.31
SNRNP70-203ENST00000544278 SMIM21Q3B7S5 101 aa13.11□□□□□ -0.31
SNRNP70-203ENST00000544278 ABHD12Q8N2K0 398 aa13.11□□□□□ -0.31
SNRNP70-203ENST00000544278 FAM216BQ8N7L0 139 aa13.11□□□□□ -0.31
SNRNP70-203ENST00000544278 CCL13Q99616 98 aa13.11□□□□□ -0.31
SNRNP70-203ENST00000544278 MALRD1Q5VYJ5 2156 aa13.11□□□□□ -0.31
SNRNP70-203ENST00000544278 MAP1LC3B2A6NCE7 125 aa13.11□□□□□ -0.31
SNRNP70-203ENST00000544278 CRYAAP02489 173 aa13.11□□□□□ -0.31
SNRNP70-203ENST00000544278 FGF7P21781 194 aa13.11□□□□□ -0.31
SNRNP70-203ENST00000544278 GPR12P47775 334 aa13.11□□□□□ -0.31
SNRNP70-203ENST00000544278 RHEBQ15382 184 aa13.11□□□□□ -0.31
SNRNP70-203ENST00000544278 WDR25Q64LD2 544 aaPredicted RBP13.11□□□□□ -0.31
SNRNP70-203ENST00000544278 CISD2Q8N5K1 135 aaKnown RBP13.11□□□□□ -0.31
SNRNP70-203ENST00000544278 DTD1Q8TEA8 209 aa13.11□□□□□ -0.31
SNRNP70-203ENST00000544278 MAP1LC3BQ9GZQ8 125 aa13.11□□□□□ -0.31
SNRNP70-203ENST00000544278 PATZ1Q9HBE1 687 aaKnown RBP13.11□□□□□ -0.31
SNRNP70-203ENST00000544278 KIAA1456Q9P272 454 aa13.11□□□□□ -0.31
SNRNP70-203ENST00000544278 MMP23AO75900 390 aa13.11□□□□□ -0.31
SNRNP70-203ENST00000544278 TUBG1P23258 451 aa13.11□□□□□ -0.31
SNRNP70-203ENST00000544278 LMO1P25800 156 aa13.11□□□□□ -0.31
SNRNP70-203ENST00000544278 TLE4Q04727 773 aa13.11□□□□□ -0.31
SNRNP70-203ENST00000544278 RTP5Q14D33 572 aa13.11□□□□□ -0.31
SNRNP70-203ENST00000544278 PRR30Q53SZ7 412 aaPredicted RBP13.11□□□□□ -0.31
SNRNP70-203ENST00000544278 WFDC8Q8IUA0 241 aa13.11□□□□□ -0.31
SNRNP70-203ENST00000544278 Q8TCH9 128 aa13.11□□□□□ -0.31
SNRNP70-203ENST00000544278 SLC25A15Q9Y619 301 aa13.11□□□□□ -0.31
SNRNP70-203ENST00000544278 TRAV38-1A0A0B4J264 116 aa13.1□□□□□ -0.31
SNRNP70-203ENST00000544278 MARCH11A6NNE9 402 aa13.1□□□□□ -0.31
SNRNP70-203ENST00000544278 CLDN14O95500 239 aa13.1□□□□□ -0.31
SNRNP70-203ENST00000544278 SRSF7Q16629 238 aaKnown RBP eCLIP13.1□□□□□ -0.31
SNRNP70-203ENST00000544278 MOB1BQ7L9L4 216 aa13.1□□□□□ -0.31
SNRNP70-203ENST00000544278 ABHD5Q8WTS1 349 aa13.1□□□□□ -0.31
SNRNP70-203ENST00000544278 TAF15Q92804 592 aaKnown RBP eCLIP13.1□□□□□ -0.31
SNRNP70-203ENST00000544278 C2orf88Q9BSF0 95 aa13.1□□□□□ -0.31
SNRNP70-203ENST00000544278 DFFBO76075 338 aa13.1□□□□□ -0.31
SNRNP70-203ENST00000544278 GYPAP02724 150 aa13.1□□□□□ -0.31
SNRNP70-203ENST00000544278 HNF1AP20823 631 aa13.1□□□□□ -0.31
SNRNP70-203ENST00000544278 RND1Q92730 232 aa13.1□□□□□ -0.31
SNRNP70-203ENST00000544278 MUCL1Q96DR8 90 aa13.1□□□□□ -0.31
SNRNP70-203ENST00000544278 WDR61Q9GZS3 305 aaKnown RBP13.1□□□□□ -0.31
SNRNP70-203ENST00000544278 HES4Q9HCC6 221 aa13.1□□□□□ -0.31
SNRNP70-203ENST00000544278 PLSCR4Q9NRQ2 329 aa13.1□□□□□ -0.31
SNRNP70-203ENST00000544278 SLC39A9Q9NUM3 307 aa13.1□□□□□ -0.31
SNRNP70-203ENST00000544278 LRRC30A6NM36 301 aa13.09□□□□□ -0.31
SNRNP70-203ENST00000544278 CGAP01215 116 aa13.09□□□□□ -0.31
SNRNP70-203ENST00000544278 NPSP0C0P6 89 aa13.09□□□□□ -0.31
SNRNP70-203ENST00000544278 ELOBQ15370 118 aa13.09□□□□□ -0.31
SNRNP70-203ENST00000544278 PRAMEF5Q5TYX0 476 aa13.09□□□□□ -0.31
SNRNP70-203ENST00000544278 IL22RA2Q969J5 263 aa13.09□□□□□ -0.31
SNRNP70-203ENST00000544278 R3HDM4Q96D70 268 aa13.09□□□□□ -0.31
SNRNP70-203ENST00000544278 NIPSNAP3BQ9BS92 247 aa13.09□□□□□ -0.31
SNRNP70-203ENST00000544278 CD200P41217 278 aa13.09□□□□□ -0.31
SNRNP70-203ENST00000544278 HIST1H2BLQ99880 126 aa13.09□□□□□ -0.31
SNRNP70-203ENST00000544278 AGMATQ9BSE5 352 aa13.09□□□□□ -0.31
SNRNP70-203ENST00000544278 SPG11Q96JI7 2443 aa13.09□□□□□ -0.31
SNRNP70-203ENST00000544278 PGPEP1LA6NFU8 196 aa13.08□□□□□ -0.32
SNRNP70-203ENST00000544278 SPINT2O43291 252 aa13.08□□□□□ -0.32
SNRNP70-203ENST00000544278 REG1BP48304 166 aa13.08□□□□□ -0.32
SNRNP70-203ENST00000544278 HBG1P69891 147 aa13.08□□□□□ -0.32
SNRNP70-203ENST00000544278 HBG2P69892 147 aa13.08□□□□□ -0.32
SNRNP70-203ENST00000544278 ADIRFQ15847 76 aa13.08□□□□□ -0.32
SNRNP70-203ENST00000544278 FFAR4Q5NUL3 377 aa13.08□□□□□ -0.32
SNRNP70-203ENST00000544278 SSMEM1Q8WWF3 244 aa13.08□□□□□ -0.32
SNRNP70-203ENST00000544278 LSM10Q969L4 123 aaKnown RBP13.08□□□□□ -0.32
SNRNP70-203ENST00000544278 DUXBA0A1W2PPF3 345 aa13.08□□□□□ -0.32
SNRNP70-203ENST00000544278 A8MWP6 167 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms