RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 MRPL13Q9BYD1 178 aaKnown RBP11.78□□□□□ -0.52
RPS6KC1-206ENST00000543354 PRR14LQ5THK1 2151 aa11.78□□□□□ -0.52
RPS6KC1-206ENST00000543354 TRAV17A0A0B4J275 112 aa11.78□□□□□ -0.52
RPS6KC1-206ENST00000543354 ODAMA1E959 279 aa11.78□□□□□ -0.52
RPS6KC1-206ENST00000543354 DNPH1O43598 174 aa11.78□□□□□ -0.52
RPS6KC1-206ENST00000543354 LINC00869P0C866 280 aa11.78□□□□□ -0.52
RPS6KC1-206ENST00000543354 TFPI2P48307 235 aa11.78□□□□□ -0.52
RPS6KC1-206ENST00000543354 TAS2R60P59551 318 aa11.78□□□□□ -0.52
RPS6KC1-206ENST00000543354 C5orf17Q8NAS9 161 aa11.78□□□□□ -0.52
RPS6KC1-206ENST00000543354 SFRP2Q96HF1 295 aa11.78□□□□□ -0.52
RPS6KC1-206ENST00000543354 LYZL4Q96KX0 146 aa11.78□□□□□ -0.52
RPS6KC1-206ENST00000543354 HIST1H2BLQ99880 126 aa11.78□□□□□ -0.52
RPS6KC1-206ENST00000543354 TM2D1Q9BX74 207 aa11.78□□□□□ -0.52
RPS6KC1-206ENST00000543354 GLRX2Q9NS18 164 aa11.78□□□□□ -0.52
RPS6KC1-206ENST00000543354 LAMA2P24043 3122 aaKnown RBP11.78□□□□□ -0.52
RPS6KC1-206ENST00000543354 A0A1W2PN81 502 aa11.78□□□□□ -0.52
RPS6KC1-206ENST00000543354 TMEM250H0YL14 139 aa11.78□□□□□ -0.52
RPS6KC1-206ENST00000543354 S100A7P31151 101 aa11.78□□□□□ -0.52
RPS6KC1-206ENST00000543354 NUBP1P53384 320 aa11.78□□□□□ -0.52
RPS6KC1-206ENST00000543354 C10orf113Q5VZT2 155 aa11.78□□□□□ -0.52
RPS6KC1-206ENST00000543354 RAB37Q96AX2 223 aa11.78□□□□□ -0.52
RPS6KC1-206ENST00000543354 DCTN5Q9BTE1 182 aa11.78□□□□□ -0.52
RPS6KC1-206ENST00000543354 MAP1LC3CQ9BXW4 147 aa11.78□□□□□ -0.52
RPS6KC1-206ENST00000543354 TTTY12Q9BZ98 90 aa11.78□□□□□ -0.52
RPS6KC1-206ENST00000543354 SELENOKQ9Y6D0 94 aa11.78□□□□□ -0.52
RPS6KC1-206ENST00000543354 FNDC1Q4ZHG4 1894 aaPredicted RBP11.78□□□□□ -0.52
RPS6KC1-206ENST00000543354 RELBQ01201 579 aa11.77□□□□□ -0.52
RPS6KC1-206ENST00000543354 DCAF10Q5QP82 559 aa11.77□□□□□ -0.52
RPS6KC1-206ENST00000543354 ZBTB34Q8NCN2 500 aa11.77□□□□□ -0.52
RPS6KC1-206ENST00000543354 GATAD1Q8WUU5 269 aa11.77□□□□□ -0.52
RPS6KC1-206ENST00000543354 SNAI2O43623 268 aa11.77□□□□□ -0.53
RPS6KC1-206ENST00000543354 NAPSAO96009 420 aa11.77□□□□□ -0.53
RPS6KC1-206ENST00000543354 C1QTNF9P0C862 333 aa11.77□□□□□ -0.53
RPS6KC1-206ENST00000543354 UCP2P55851 309 aa11.77□□□□□ -0.53
RPS6KC1-206ENST00000543354 PLAURQ03405 335 aa11.77□□□□□ -0.53
RPS6KC1-206ENST00000543354 KCNMB1Q16558 191 aa11.77□□□□□ -0.53
RPS6KC1-206ENST00000543354 OR51B2Q9Y5P1 312 aa11.77□□□□□ -0.53
RPS6KC1-206ENST00000543354 PTPRQQ9UMZ3 2332 aa11.77□□□□□ -0.53
RPS6KC1-206ENST00000543354 RPL23P62829 140 aaKnown RBP11.77□□□□□ -0.53
RPS6KC1-206ENST00000543354 OR2V2Q96R30 315 aa11.77□□□□□ -0.53
RPS6KC1-206ENST00000543354 UQCR10Q9UDW1 63 aa11.77□□□□□ -0.53
RPS6KC1-206ENST00000543354 IGKV3-7A0A075B6H7 116 aa11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 LOC390937A0A1W2PQ73 354 aa11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 EFNA2O43921 213 aa11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 CELA3AP09093 270 aa11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 MPV17P39210 176 aa11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 CCL13Q99616 98 aa11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 PAXXQ9BUH6 204 aa11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 NPIPB13A6NJU9 1138 aa11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 NPIPB4C9JG80 1138 aa11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 HIST1H1EP10412 219 aaKnown RBP11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 GATA2P23769 480 aaPredicted RBP11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 NMUP48645 174 aa11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 TNFSF10P50591 281 aa11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 RBPJQ06330 500 aa11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 LBHQ53QV2 105 aaPredicted RBP11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 FAM166AQ6J272 317 aa11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 OR4B1Q8NGF8 309 aa11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 MYO18BQ8IUG5 2567 aa11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 IGHV1-45A0A0A0MS14 117 aa11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 hCG_38984A0A1B0GV85 526 aa11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 TFF1P04155 84 aa11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 CD40P25942 277 aa11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 TGIF2LYQ8IUE0 185 aa11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 WBP1Q96G27 269 aa11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 NEU1Q99519 415 aa11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 PARD6GQ9BYG4 376 aaPredicted RBP11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 ZSWIM8A7E2V4 1837 aa11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 ARHGAP21Q5T5U3 1957 aa11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 PGPA6NDG6 321 aa11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 C17orf98A8MV24 154 aa11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 BPIFA4PQ86YQ2 179 aa11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 ZPBPQ9BS86 351 aa11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 WDR54Q9H977 334 aa11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 SEBOXQ9HB31 216 aaPredicted RBP11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 UFC1Q9Y3C8 167 aa11.76□□□□□ -0.53
RPS6KC1-206ENST00000543354 TRGV8A0A0C4DH27 118 aa11.75□□□□□ -0.53
RPS6KC1-206ENST00000543354 IGKV1-12A0A0C4DH73 117 aa11.75□□□□□ -0.53
RPS6KC1-206ENST00000543354 IGKV1D-12P01611 117 aa11.75□□□□□ -0.53
RPS6KC1-206ENST00000543354 GCSAMLQ5JQS6 135 aa11.75□□□□□ -0.53
RPS6KC1-206ENST00000543354 RIPPLY2Q5TAB7 128 aa11.75□□□□□ -0.53
RPS6KC1-206ENST00000543354 PRNTQ86SH4 94 aa11.75□□□□□ -0.53
RPS6KC1-206ENST00000543354 ZNF645Q8N7E2 425 aa11.75□□□□□ -0.53
RPS6KC1-206ENST00000543354 ZNRF1Q8ND25 227 aa11.75□□□□□ -0.53
RPS6KC1-206ENST00000543354 PRNDQ9UKY0 176 aa11.75□□□□□ -0.53
RPS6KC1-206ENST00000543354 TCF19Q9Y242 345 aa11.75□□□□□ -0.53
RPS6KC1-206ENST00000543354 CHCHD2Q9Y6H1 151 aaPredicted RBP11.75□□□□□ -0.53
RPS6KC1-206ENST00000543354 C2CD3Q4AC94 2353 aa11.75□□□□□ -0.53
RPS6KC1-206ENST00000543354 SCO2A0A1W2PP80 73 aa11.75□□□□□ -0.53
RPS6KC1-206ENST00000543354 ISLRO14498 428 aa11.75□□□□□ -0.53
RPS6KC1-206ENST00000543354 PCOLCEQ15113 449 aa11.75□□□□□ -0.53
RPS6KC1-206ENST00000543354 COX19Q49B96 90 aa11.75□□□□□ -0.53
RPS6KC1-206ENST00000543354 PRR31Q5SQ13 230 aa11.75□□□□□ -0.53
RPS6KC1-206ENST00000543354 C10orf128Q5T292 105 aa11.75□□□□□ -0.53
RPS6KC1-206ENST00000543354 SLC35E4Q6ICL7 350 aa11.75□□□□□ -0.53
RPS6KC1-206ENST00000543354 ZNF525Q8N782 197 aa11.75□□□□□ -0.53
RPS6KC1-206ENST00000543354 NDUFAF3Q9BU61 184 aa11.75□□□□□ -0.53
RPS6KC1-206ENST00000543354 NPCDR1Q9BY65 106 aa11.75□□□□□ -0.53
RPS6KC1-206ENST00000543354 ONECUT1Q9UBC0 465 aa11.75□□□□□ -0.53
RPS6KC1-206ENST00000543354 NOTCH2Q04721 2471 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms