RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 CEACAM18A8MTB9 384 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 RAB29O14966 203 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 BLVRBP30043 206 aaPredicted RBP6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 RND2P52198 227 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 ZNF266Q14584 549 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 TNXAQ16473 311 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 IGFL2Q6UWQ7 119 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 FAM57BQ71RH2 274 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 C16orf82Q7Z2V1 217 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 APH1AQ96BI3 265 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 OR5B12Q96R08 314 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 SLC7A10Q9NS82 523 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 DLL3Q9NYJ7 618 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 OR51B2Q9Y5P1 312 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 ZNF292O60281 2723 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 IGKV1D-8A0A087WSZ0 117 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 OR6C6A6NF89 314 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 TMEM14DPA8MWL7 114 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 B4GALT1P15291 398 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 RRADP55042 308 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 TAS2R30P59541 319 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 SRYQ05066 204 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 ZNF766Q5HY98 468 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 LGI3Q8N145 548 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 OR5C1Q8NGR4 320 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 FGFBP3Q8TAT2 258 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 GALMQ96C23 342 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 ZDHHC11Q9H8X9 412 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 BET1LQ9NYM9 111 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 CSDC2Q9Y534 153 aaKnown RBP6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 NCOA6Q14686 2063 aaPredicted RBP6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 CEBPZOSA8MTT3 80 aa6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 VENTXO95231 258 aa6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 GNG3P63215 75 aa6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 PLGLB1Q02325 96 aa6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 RTP5Q14D33 572 aa6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 CEACAM16Q2WEN9 425 aa6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 FAM90A2PQ658T7 463 aa6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 DOK3Q7L591 496 aa6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 FBXL14Q8N1E6 418 aa6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 KCNG3Q8TAE7 436 aa6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 C1orf147Q96MC9 270 aaPredicted RBP6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 FOXB1Q99853 325 aa6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 HDHD3Q9BSH5 251 aaPredicted RBP6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 LINC00470Q9BZP3 86 aa6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 ZNF665Q9H7R5 613 aa6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 CRIM1Q9NZV1 1036 aa6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 SPRR3Q9UBC9 169 aa6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 NAT8Q9UHE5 227 aa6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 IGKV1-9A0A0C4DH69 117 aa6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 SSSCA1O60232 199 aa6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 SYNGR4O95473 234 aa6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 HAND1O96004 215 aa6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 HLA-HP01893 362 aa6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 TMEM225BP0DP42 221 aa6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 GUCA1AP43080 201 aaPredicted RBP6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 GALR1P47211 349 aa6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 PNRC1Q12796 327 aaPredicted RBP6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 C3AR1Q16581 482 aa6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 TMEM183BQ1AE95 376 aa6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 TMEM256Q8N2U0 113 aa6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 CISD2Q8N5K1 135 aaKnown RBP6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 FDCSPQ8NFU4 85 aa6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 RTN4IP1Q8WWV3 396 aaPredicted RBP6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 RBMXL1Q96E39 390 aaKnown RBP6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 ACY3Q96HD9 319 aa6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 OR10A2Q9H208 303 aa6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 GCM1Q9NP62 436 aa6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 ZNF586Q9NXT0 402 aa6.74□□□□□ -1.33
PDLIM5-221ENST00000542407 LOC102723971A0A1B0GUV8 181 aa6.73□□□□□ -1.33
PDLIM5-221ENST00000542407 CRYM-AS1A6NIL9 109 aa6.73□□□□□ -1.33
PDLIM5-221ENST00000542407 ZNF850A8MQ14 1090 aa6.73□□□□□ -1.33
PDLIM5-221ENST00000542407 H7BYZ3 331 aa6.73□□□□□ -1.33
PDLIM5-221ENST00000542407 M0R135 149 aa6.73□□□□□ -1.33
PDLIM5-221ENST00000542407 RSPO4Q2I0M5 234 aaPredicted RBP6.73□□□□□ -1.33
PDLIM5-221ENST00000542407 NRN1LQ496H8 165 aa6.73□□□□□ -1.33
PDLIM5-221ENST00000542407 COA6Q5JTJ3 125 aaKnown RBP6.73□□□□□ -1.33
PDLIM5-221ENST00000542407 TMEM171Q8WVE6 324 aa6.73□□□□□ -1.33
PDLIM5-221ENST00000542407 ZNF799Q96GE5 643 aa6.73□□□□□ -1.33
PDLIM5-221ENST00000542407 WDYHV1Q96HA8 205 aa6.73□□□□□ -1.33
PDLIM5-221ENST00000542407 SDF2L1Q9HCN8 221 aa6.73□□□□□ -1.33
PDLIM5-221ENST00000542407 THYN1Q9P016 225 aa6.73□□□□□ -1.33
PDLIM5-221ENST00000542407 FBLN5Q9UBX5 448 aa6.73□□□□□ -1.33
PDLIM5-221ENST00000542407 CNTRLQ7Z7A1 2325 aa6.73□□□□□ -1.33
PDLIM5-221ENST00000542407 F5H5K5 113 aa6.73□□□□□ -1.33
PDLIM5-221ENST00000542407 PHF1O43189 567 aaPredicted RBP6.73□□□□□ -1.33
PDLIM5-221ENST00000542407 HBE1P02100 147 aa6.73□□□□□ -1.33
PDLIM5-221ENST00000542407 PATE4P0C8F1 98 aa6.73□□□□□ -1.33
PDLIM5-221ENST00000542407 ZNF32P17041 273 aa6.73□□□□□ -1.33
PDLIM5-221ENST00000542407 GABRA2P47869 451 aa6.73□□□□□ -1.33
PDLIM5-221ENST00000542407 DYNLT3P51808 116 aa6.73□□□□□ -1.33
PDLIM5-221ENST00000542407 ARG2P78540 354 aa6.73□□□□□ -1.33
PDLIM5-221ENST00000542407 PSG4Q00888 419 aa6.73□□□□□ -1.33
PDLIM5-221ENST00000542407 ZNF92Q03936 586 aa6.73□□□□□ -1.33
PDLIM5-221ENST00000542407 IL13RA2Q14627 380 aa6.73□□□□□ -1.33
PDLIM5-221ENST00000542407 RNF152Q8N8N0 203 aa6.73□□□□□ -1.33
PDLIM5-221ENST00000542407 SMIM7Q9BQ49 75 aa6.73□□□□□ -1.33
PDLIM5-221ENST00000542407 OR2H1Q9GZK4 316 aa6.73□□□□□ -1.33
PDLIM5-221ENST00000542407 PPDPFQ9H3Y8 114 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms