RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 MRPS7Q9Y2R9 242 aaKnown RBP12.63□□□□□ -0.39
CCND1-205ENST00000542367 TNCP24821 2201 aa12.63□□□□□ -0.39
CCND1-205ENST00000542367 COL7A1Q02388 2944 aa12.62□□□□□ -0.39
CCND1-205ENST00000542367 ANKRD34BA5PLL1 514 aa12.62□□□□□ -0.39
CCND1-205ENST00000542367 BRI3O95415 125 aa12.62□□□□□ -0.39
CCND1-205ENST00000542367 AADACP22760 399 aa12.62□□□□□ -0.39
CCND1-205ENST00000542367 FCGR2CP31995 323 aa12.62□□□□□ -0.39
CCND1-205ENST00000542367 RPS19P39019 145 aaKnown RBP12.62□□□□□ -0.39
CCND1-205ENST00000542367 LSM3P62310 102 aaKnown RBP12.62□□□□□ -0.39
CCND1-205ENST00000542367 EIF4EBP1Q13541 118 aaPredicted RBP12.62□□□□□ -0.39
CCND1-205ENST00000542367 CDK10Q15131 360 aa12.62□□□□□ -0.39
CCND1-205ENST00000542367 OVCH2Q7RTZ1 564 aa12.62□□□□□ -0.39
CCND1-205ENST00000542367 CROCCP3Q8IVE0 287 aa12.62□□□□□ -0.39
CCND1-205ENST00000542367 MFSD4AQ8N468 514 aa12.62□□□□□ -0.39
CCND1-205ENST00000542367 SRSF12Q8WXF0 261 aaKnown RBP12.62□□□□□ -0.39
CCND1-205ENST00000542367 YIPF6Q96EC8 236 aa12.62□□□□□ -0.39
CCND1-205ENST00000542367 ZNF430Q9H8G1 570 aaPredicted RBP12.62□□□□□ -0.39
CCND1-205ENST00000542367 VCX3AQ9NNX9 186 aa12.62□□□□□ -0.39
CCND1-205ENST00000542367 TAS2R8Q9NYW2 309 aa12.62□□□□□ -0.39
CCND1-205ENST00000542367 SORL1Q92673 2214 aa12.62□□□□□ -0.39
CCND1-205ENST00000542367 ACTL6BO94805 426 aa12.61□□□□□ -0.39
CCND1-205ENST00000542367 TNFAIP8O95379 198 aa12.61□□□□□ -0.39
CCND1-205ENST00000542367 OR9G9P0C7N8 305 aa12.61□□□□□ -0.39
CCND1-205ENST00000542367 SPNP16150 400 aa12.61□□□□□ -0.39
CCND1-205ENST00000542367 DEFA5Q01523 94 aa12.61□□□□□ -0.39
CCND1-205ENST00000542367 VKORC1L1Q8N0U8 176 aa12.61□□□□□ -0.39
CCND1-205ENST00000542367 SECTM1Q8WVN6 248 aa12.61□□□□□ -0.39
CCND1-205ENST00000542367 TCTEX1D2Q8WW35 142 aa12.61□□□□□ -0.39
CCND1-205ENST00000542367 S100A16Q96FQ6 103 aaKnown RBP12.61□□□□□ -0.39
CCND1-205ENST00000542367 OR4C12Q96R67 309 aa12.61□□□□□ -0.39
CCND1-205ENST00000542367 GPHA2Q96T91 129 aa12.61□□□□□ -0.39
CCND1-205ENST00000542367 CCL28Q9NRJ3 127 aa12.61□□□□□ -0.39
CCND1-205ENST00000542367 MEIS3P1A6NDR6 274 aa12.6□□□□□ -0.39
CCND1-205ENST00000542367 MPPED1O15442 326 aa12.6□□□□□ -0.39
CCND1-205ENST00000542367 XRCC3O43542 346 aa12.6□□□□□ -0.39
CCND1-205ENST00000542367 CREBL2O60519 120 aaPredicted RBP12.6□□□□□ -0.39
CCND1-205ENST00000542367 ZP3P21754 424 aa12.6□□□□□ -0.39
CCND1-205ENST00000542367 BRWD1-AS2P59051 145 aa12.6□□□□□ -0.39
CCND1-205ENST00000542367 ZNF66Q6ZN08 573 aa12.6□□□□□ -0.39
CCND1-205ENST00000542367 MMD2Q8IY49 270 aa12.6□□□□□ -0.39
CCND1-205ENST00000542367 ADAD2Q8NCV1 583 aaKnown RBP12.6□□□□□ -0.39
CCND1-205ENST00000542367 OR6Q1Q8NGQ2 317 aa12.6□□□□□ -0.39
CCND1-205ENST00000542367 OR13F1Q8NGS4 319 aa12.6□□□□□ -0.39
CCND1-205ENST00000542367 OR4S2Q8NH73 311 aa12.6□□□□□ -0.39
CCND1-205ENST00000542367 USMG5Q96IX5 58 aa12.6□□□□□ -0.39
CCND1-205ENST00000542367 TNFSF12O43508 249 aa12.59□□□□□ -0.39
CCND1-205ENST00000542367 RBMXL2O75526 392 aaKnown RBP12.59□□□□□ -0.39
CCND1-205ENST00000542367 PPYP01298 95 aa12.59□□□□□ -0.39
CCND1-205ENST00000542367 NHLRC4P0CG21 123 aaPredicted RBP12.59□□□□□ -0.39
CCND1-205ENST00000542367 CBX5P45973 191 aa12.59□□□□□ -0.39
CCND1-205ENST00000542367 DYRK1AQ13627 763 aa12.59□□□□□ -0.39
CCND1-205ENST00000542367 C10orf55Q5SWW7 151 aa12.59□□□□□ -0.39
CCND1-205ENST00000542367 ZNF343Q6P1L6 599 aa12.59□□□□□ -0.39
CCND1-205ENST00000542367 SNAPC3Q92966 411 aa12.59□□□□□ -0.39
CCND1-205ENST00000542367 SPIN2AQ99865 258 aa12.59□□□□□ -0.39
CCND1-205ENST00000542367 SPIN2BQ9BPZ2 258 aa12.59□□□□□ -0.39
CCND1-205ENST00000542367 ELOVL1Q9BW60 279 aa12.59□□□□□ -0.39
CCND1-205ENST00000542367 PEF1Q9UBV8 284 aaKnown RBP12.59□□□□□ -0.39
CCND1-205ENST00000542367 OR2A4O95047 310 aa12.58□□□□□ -0.4
CCND1-205ENST00000542367 PRH1P02810 166 aa12.58□□□□□ -0.4
CCND1-205ENST00000542367 GP9P14770 177 aa12.58□□□□□ -0.4
CCND1-205ENST00000542367 FXYD4P59646 89 aa12.58□□□□□ -0.4
CCND1-205ENST00000542367 KLF5Q13887 457 aaPredicted RBP12.58□□□□□ -0.4
CCND1-205ENST00000542367 UBE2NLQ5JXB2 153 aa12.58□□□□□ -0.4
CCND1-205ENST00000542367 PUSL1Q8N0Z8 303 aaKnown RBP12.58□□□□□ -0.4
CCND1-205ENST00000542367 SAMD12Q8N8I0 201 aa12.58□□□□□ -0.4
CCND1-205ENST00000542367 OR5AP2Q8NGF4 316 aa12.58□□□□□ -0.4
CCND1-205ENST00000542367 OR2A7Q96R45 310 aa12.58□□□□□ -0.4
CCND1-205ENST00000542367 ASCL2Q99929 193 aa12.58□□□□□ -0.4
CCND1-205ENST00000542367 SLC5A7Q9GZV3 580 aa12.58□□□□□ -0.4
CCND1-205ENST00000542367 SMAD5-AS1Q9Y6J3 95 aa12.58□□□□□ -0.4
CCND1-205ENST00000542367 KBTBD11O94819 623 aa12.57□□□□□ -0.4
CCND1-205ENST00000542367 HRASP01112 189 aa12.57□□□□□ -0.4
CCND1-205ENST00000542367 TRBV12-3P01733 135 aa12.57□□□□□ -0.4
CCND1-205ENST00000542367 RHOGP84095 191 aa12.57□□□□□ -0.4
CCND1-205ENST00000542367 MSMO1Q15800 293 aa12.57□□□□□ -0.4
CCND1-205ENST00000542367 TMEM69Q5SWH9 247 aa12.57□□□□□ -0.4
CCND1-205ENST00000542367 HAPLN4Q86UW8 402 aa12.57□□□□□ -0.4
CCND1-205ENST00000542367 TTC9CQ8N5M4 171 aa12.57□□□□□ -0.4
CCND1-205ENST00000542367 ZBTB34Q8NCN2 500 aa12.57□□□□□ -0.4
CCND1-205ENST00000542367 VSTM2AQ8TAG5 236 aa12.57□□□□□ -0.4
CCND1-205ENST00000542367 TMEM167AQ8TBQ9 72 aa12.57□□□□□ -0.4
CCND1-205ENST00000542367 GIMAP1Q8WWP7 306 aa12.57□□□□□ -0.4
CCND1-205ENST00000542367 RSRP1Q9BUV0 290 aa12.57□□□□□ -0.4
CCND1-205ENST00000542367 AKIP1Q9NQ31 210 aa12.57□□□□□ -0.4
CCND1-205ENST00000542367 IFT46Q9NQC8 304 aa12.57□□□□□ -0.4
CCND1-205ENST00000542367 HMX3A6NHT5 357 aa12.56□□□□□ -0.4
CCND1-205ENST00000542367 TRIM64CA6NLI5 447 aa12.56□□□□□ -0.4
CCND1-205ENST00000542367 KIR2DS2P43631 304 aa12.56□□□□□ -0.4
CCND1-205ENST00000542367 SYNJ2BPP57105 145 aa12.56□□□□□ -0.4
CCND1-205ENST00000542367 TAS2R20P59543 309 aa12.56□□□□□ -0.4
CCND1-205ENST00000542367 ZNF45Q02386 682 aa12.56□□□□□ -0.4
CCND1-205ENST00000542367 SSX9Q7RTT3 188 aa12.56□□□□□ -0.4
CCND1-205ENST00000542367 ANKRD13BQ86YJ7 626 aa12.56□□□□□ -0.4
CCND1-205ENST00000542367 SPAG16Q8N0X2 631 aa12.56□□□□□ -0.4
CCND1-205ENST00000542367 OR9G4Q8NGQ1 327 aa12.56□□□□□ -0.4
CCND1-205ENST00000542367 SLC25A46Q96AG3 418 aa12.56□□□□□ -0.4
CCND1-205ENST00000542367 ADAM30Q9UKF2 790 aa12.56□□□□□ -0.4
CCND1-205ENST00000542367 TRBV9A0A0B4J1U6 114 aa12.55□□□□□ -0.4
CCND1-205ENST00000542367 FAM223BA6NKX1 122 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms