RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 NPFFR1Q9GZQ6 430 aa9.19□□□□□ -0.94
GABRB3-204ENST00000541819 TMEM106BQ9NUM4 274 aa9.19□□□□□ -0.94
GABRB3-204ENST00000541819 A0A1W2PP11 408 aa9.19□□□□□ -0.94
GABRB3-204ENST00000541819 ZNHIT1O43257 154 aa9.19□□□□□ -0.94
GABRB3-204ENST00000541819 IGKV1D-16P01601 117 aa9.19□□□□□ -0.94
GABRB3-204ENST00000541819 COX5BP10606 129 aa9.19□□□□□ -0.94
GABRB3-204ENST00000541819 UBE2DNLQ8IWF7 75 aa9.19□□□□□ -0.94
GABRB3-204ENST00000541819 TMEM52Q8NDY8 209 aa9.19□□□□□ -0.94
GABRB3-204ENST00000541819 DMRTA2Q96SC8 542 aa9.19□□□□□ -0.94
GABRB3-204ENST00000541819 AICDAQ9GZX7 198 aa9.19□□□□□ -0.94
GABRB3-204ENST00000541819 KCNK7Q9Y2U2 307 aa9.19□□□□□ -0.94
GABRB3-204ENST00000541819 TRAV24A0A0B4J272 114 aa9.19□□□□□ -0.94
GABRB3-204ENST00000541819 ATP5IP56385 69 aaPredicted RBP9.19□□□□□ -0.94
GABRB3-204ENST00000541819 ACSF3Q4G176 576 aaPredicted RBP9.19□□□□□ -0.94
GABRB3-204ENST00000541819 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.19□□□□□ -0.94
GABRB3-204ENST00000541819 SAMD13Q5VXD3 122 aa9.19□□□□□ -0.94
GABRB3-204ENST00000541819 CYP2G1PQ6ZSU1 146 aa9.19□□□□□ -0.94
GABRB3-204ENST00000541819 RTN4RL2Q86UN3 420 aa9.19□□□□□ -0.94
GABRB3-204ENST00000541819 MBD3L1Q8WWY6 194 aa9.19□□□□□ -0.94
GABRB3-204ENST00000541819 FAM168AQ92567 244 aa9.19□□□□□ -0.94
GABRB3-204ENST00000541819 NABP2Q9BQ15 211 aa9.19□□□□□ -0.94
GABRB3-204ENST00000541819 TCF19Q9Y242 345 aa9.19□□□□□ -0.94
GABRB3-204ENST00000541819 MOSP00540 346 aa9.19□□□□□ -0.94
GABRB3-204ENST00000541819 SP9P0CG40 484 aa9.19□□□□□ -0.94
GABRB3-204ENST00000541819 NPIPB3Q92617 1050 aa9.19□□□□□ -0.94
GABRB3-204ENST00000541819 SCGB3A1Q96QR1 104 aa9.19□□□□□ -0.94
GABRB3-204ENST00000541819 A0A1B0GUL6 1792 aa9.19□□□□□ -0.94
GABRB3-204ENST00000541819 NPIPB4C9JG80 1138 aa9.18□□□□□ -0.94
GABRB3-204ENST00000541819 AGAP20933 346 aa9.18□□□□□ -0.94
GABRB3-204ENST00000541819 BHLHA9Q7RTU4 235 aa9.18□□□□□ -0.94
GABRB3-204ENST00000541819 BIVMQ86UB2 503 aa9.18□□□□□ -0.94
GABRB3-204ENST00000541819 STHQ8IWL8 128 aa9.18□□□□□ -0.94
GABRB3-204ENST00000541819 FAM169BQ8N8A8 192 aa9.18□□□□□ -0.94
GABRB3-204ENST00000541819 PAPPAQ13219 1627 aa9.18□□□□□ -0.94
GABRB3-204ENST00000541819 VDAC2P45880 294 aaPredicted RBP9.18□□□□□ -0.94
GABRB3-204ENST00000541819 ZNF385CQ66K41 422 aaPredicted RBP9.18□□□□□ -0.94
GABRB3-204ENST00000541819 PPP1R27Q86WC6 154 aa9.18□□□□□ -0.94
GABRB3-204ENST00000541819 FBXL7Q9UJT9 491 aa9.18□□□□□ -0.94
GABRB3-204ENST00000541819 TRAV8-6A0A0B4J262 113 aa9.18□□□□□ -0.94
GABRB3-204ENST00000541819 CDK2AP2O75956 126 aa9.18□□□□□ -0.94
GABRB3-204ENST00000541819 RNASE4P34096 147 aaKnown RBP9.18□□□□□ -0.94
GABRB3-204ENST00000541819 TEX45Q8NA69 505 aa9.18□□□□□ -0.94
GABRB3-204ENST00000541819 SSC4DQ8WTU2 575 aa9.18□□□□□ -0.94
GABRB3-204ENST00000541819 FAM206AQ9NX38 181 aa9.18□□□□□ -0.94
GABRB3-204ENST00000541819 COLQQ9Y215 455 aaPredicted RBP9.18□□□□□ -0.94
GABRB3-204ENST00000541819 IGHV3-35A0A0C4DH35 117 aa9.18□□□□□ -0.94
GABRB3-204ENST00000541819 KLK2P20151 261 aa9.18□□□□□ -0.94
GABRB3-204ENST00000541819 LEPP41159 167 aa9.18□□□□□ -0.94
GABRB3-204ENST00000541819 TMEM42Q69YG0 159 aa9.18□□□□□ -0.94
GABRB3-204ENST00000541819 SCARF2Q96GP6 870 aaPredicted RBP9.18□□□□□ -0.94
GABRB3-204ENST00000541819 G6PC2Q9NQR9 355 aa9.18□□□□□ -0.94
GABRB3-204ENST00000541819 PLCH1Q4KWH8 1693 aa9.18□□□□□ -0.94
GABRB3-204ENST00000541819 TJP1Q07157 1748 aa9.18□□□□□ -0.94
GABRB3-204ENST00000541819 IGHV3OR16-13A0A075B7E8 117 aa9.18□□□□□ -0.94
GABRB3-204ENST00000541819 IGHV3-74A0A0B4J1X5 117 aa9.18□□□□□ -0.94
GABRB3-204ENST00000541819 ATP5LO75964 103 aa9.18□□□□□ -0.94
GABRB3-204ENST00000541819 SOD3P08294 240 aa9.18□□□□□ -0.94
GABRB3-204ENST00000541819 WDR82Q6UXN9 313 aa9.18□□□□□ -0.94
GABRB3-204ENST00000541819 DTX2Q86UW9 622 aa9.18□□□□□ -0.94
GABRB3-204ENST00000541819 HIST1H2BAQ96A08 127 aa9.18□□□□□ -0.94
GABRB3-204ENST00000541819 SPAG8Q99932 426 aaPredicted RBP9.18□□□□□ -0.94
GABRB3-204ENST00000541819 TBL2Q9Y4P3 447 aaKnown RBP9.18□□□□□ -0.94
GABRB3-204ENST00000541819 BTAF1O14981 1849 aa9.18□□□□□ -0.94
GABRB3-204ENST00000541819 NANOS3P60323 173 aaKnown RBP9.17□□□□□ -0.94
GABRB3-204ENST00000541819 ICAM4Q14773 271 aa9.17□□□□□ -0.94
GABRB3-204ENST00000541819 TMEM91Q6ZNR0 172 aa9.17□□□□□ -0.94
GABRB3-204ENST00000541819 NEUROG1Q92886 237 aa9.17□□□□□ -0.94
GABRB3-204ENST00000541819 A0A1W2PQF6 199 aa9.17□□□□□ -0.94
GABRB3-204ENST00000541819 SNAI3Q3KNW1 292 aa9.17□□□□□ -0.94
GABRB3-204ENST00000541819 OR11H4Q8NGC9 324 aa9.17□□□□□ -0.94
GABRB3-204ENST00000541819 TGIF2-C20orf24A0A0A6YYL0 155 aa9.17□□□□□ -0.94
GABRB3-204ENST00000541819 CA7P43166 264 aa9.17□□□□□ -0.94
GABRB3-204ENST00000541819 TTC9CQ8N5M4 171 aa9.17□□□□□ -0.94
GABRB3-204ENST00000541819 SMIM8Q96KF7 97 aa9.17□□□□□ -0.94
GABRB3-204ENST00000541819 GLIPR1P48060 266 aa9.17□□□□□ -0.94
GABRB3-204ENST00000541819 VKORC1L1Q8N0U8 176 aa9.17□□□□□ -0.94
GABRB3-204ENST00000541819 GCHFRP30047 84 aa9.16□□□□□ -0.94
GABRB3-204ENST00000541819 PRSS53Q2L4Q9 553 aa9.16□□□□□ -0.94
GABRB3-204ENST00000541819 TMEM95Q3KNT9 176 aa9.16□□□□□ -0.94
GABRB3-204ENST00000541819 LAMB1P07942 1786 aa9.16□□□□□ -0.94
GABRB3-204ENST00000541819 F12P00748 615 aaPredicted RBP9.16□□□□□ -0.94
GABRB3-204ENST00000541819 IGKV1D-33P01593 117 aa9.16□□□□□ -0.94
GABRB3-204ENST00000541819 IGKV1-33P01594 117 aa9.16□□□□□ -0.94
GABRB3-204ENST00000541819 C1QTNF12Q5T7M4 302 aa9.16□□□□□ -0.94
GABRB3-204ENST00000541819 CDCP2Q5VXM1 449 aa9.16□□□□□ -0.94
GABRB3-204ENST00000541819 GPR132Q9UNW8 380 aa9.16□□□□□ -0.94
GABRB3-204ENST00000541819 ARID1BQ8NFD5 2236 aaPredicted RBP9.16□□□□□ -0.94
GABRB3-204ENST00000541819 IRF3Q14653 427 aa9.16□□□□□ -0.94
GABRB3-204ENST00000541819 ARPC1AQ92747 370 aa9.16□□□□□ -0.94
GABRB3-204ENST00000541819 SLX4Q8IY92 1834 aa9.16□□□□□ -0.94
GABRB3-204ENST00000541819 IGHV3-49A0A0A0MS15 119 aa9.16□□□□□ -0.94
GABRB3-204ENST00000541819 ZIC3O60481 467 aa9.16□□□□□ -0.94
GABRB3-204ENST00000541819 FOXL2P58012 376 aa9.16□□□□□ -0.94
GABRB3-204ENST00000541819 MRPS18AQ9NVS2 196 aaKnown RBP9.16□□□□□ -0.94
GABRB3-204ENST00000541819 PILRBQ9UKJ0 227 aa9.16□□□□□ -0.94
GABRB3-204ENST00000541819 COX6A1P12074 109 aa9.16□□□□□ -0.94
GABRB3-204ENST00000541819 GATAD1Q8WUU5 269 aa9.16□□□□□ -0.94
GABRB3-204ENST00000541819 DPM3Q9P2X0 92 aa9.16□□□□□ -0.94
GABRB3-204ENST00000541819 PEX7O00628 323 aa9.15□□□□□ -0.94
GABRB3-204ENST00000541819 EIF3GO75821 320 aaKnown RBP eCLIP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms