RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 ABCA11PQ4W5N1 156 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 AKR1C8PQ5T2L2 129 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 LCN8Q6JVE9 175 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 ENPP6Q6UWR7 440 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 FA2HQ7L5A8 372 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 FAM19A1Q7Z5A9 133 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 UBALD2Q8IYN6 164 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 UBAC2Q8NBM4 344 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 ZNF439Q8NDP4 499 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 OR10G4Q8NGN3 311 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 CANT1Q8WVQ1 401 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 LCN9Q8WX39 176 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 ASB13Q8WXK3 278 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 FGF14Q92915 247 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 APOBEC3DQ96AK3 386 aaPredicted RBP3.18□□□□□ -1.9
YBX3-210ENST00000540975 LRRC58Q96CX6 371 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 DNAJC19Q96DA6 116 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 BTF3L4Q96K17 158 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 SLC35G5Q96KT7 338 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 GPR82Q96P67 336 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 ATP5SQ99766 215 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 C1QTNF6Q9BXI9 259 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 LINC00470Q9BZP3 86 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 DUSP21Q9H596 190 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 METTL17Q9H7H0 456 aaPredicted RBP3.18□□□□□ -1.9
YBX3-210ENST00000540975 FAM49BQ9NUQ9 324 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 PRO0628Q9UI54 55 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 TNFSF18Q9UNG2 199 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 AFDNP55196 1824 aaKnown RBP3.18□□□□□ -1.9
YBX3-210ENST00000540975 SHANK3Q9BYB0 1731 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 RGPD2P0DJD1 1756 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 BAZ2AQ9UIF9 1905 aaKnown RBP3.17□□□□□ -1.9
YBX3-210ENST00000540975 A0A1W2PRE2 83 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 ANKRD20A5PA0PJZ0 165 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 C7orf66A4D0T2 115 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 MAP1LC3B2A6NCE7 125 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 ZNF726A6NNF4 738 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 G3V3Q6 166 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 UPK1AO00322 258 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 PLPP1O14494 284 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 UBFD1O14562 309 aaKnown RBP3.17□□□□□ -1.9
YBX3-210ENST00000540975 MYL12BO14950 172 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 DEGS1O15121 323 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 RBFOX2O43251 390 aaKnown RBP eCLIP3.17□□□□□ -1.9
YBX3-210ENST00000540975 EIF4E2O60573 245 aaKnown RBP3.17□□□□□ -1.9
YBX3-210ENST00000540975 ATP5LO75964 103 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 ESDP10768 282 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 MYL12AP19105 171 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 KDELR1P24390 212 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 RPL12P30050 165 aaKnown RBP3.17□□□□□ -1.9
YBX3-210ENST00000540975 BRS3P32247 399 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 TGFBR1P36897 503 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 RPL13AP40429 203 aaKnown RBP3.17□□□□□ -1.9
YBX3-210ENST00000540975 TNFSF9P41273 254 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 SLC35A2P78381 396 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 DCDP81605 110 aaKnown RBP3.17□□□□□ -1.9
YBX3-210ENST00000540975 HOXC5Q00444 222 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 EBPQ15125 230 aaKnown RBP3.17□□□□□ -1.9
YBX3-210ENST00000540975 CLEC12AQ5QGZ9 265 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 TMEM69Q5SWH9 247 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 TPTE2P1Q5T6R2 138 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 FAM162BQ5T6X4 162 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 ZCCHC23Q6ZST2 131 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 RASSF6Q6ZTQ3 369 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 FAM19A5Q7Z5A7 132 aaPredicted RBP3.17□□□□□ -1.9
YBX3-210ENST00000540975 ZNF547Q8IVP9 402 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 CMTM1Q8IZ96 169 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 ZNF567Q8N184 647 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 MS4A15Q8N5U1 240 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 CHST4Q8NCG5 386 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 TSTD1Q8NFU3 115 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 OR9I1Q8NGQ6 314 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 OR10R2Q8NGX6 335 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 OR2T4Q8NH00 348 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 OR5B3Q8NH48 314 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 ARL11Q969Q4 196 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 UBE2E3Q969T4 207 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 MRPS24Q96EL2 167 aaKnown RBP3.17□□□□□ -1.9
YBX3-210ENST00000540975 AURKBQ96GD4 344 aaPredicted RBP3.17□□□□□ -1.9
YBX3-210ENST00000540975 BMFQ96LC9 184 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 TP53RKQ96S44 253 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 NDFIP1Q9BT67 221 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 FAAP24Q9BTP7 215 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 EFCAB11Q9BUY7 163 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 MAP1LC3BQ9GZQ8 125 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 RBFOX1Q9NWB1 397 aaKnown RBP3.17□□□□□ -1.9
YBX3-210ENST00000540975 SCN3BQ9NY72 215 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 CALYQ9NYX4 217 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 XCL2Q9UBD3 114 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 ERG28Q9UKR5 140 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 ST3GAL6Q9Y274 331 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 RCL1Q9Y2P8 373 aaKnown RBP3.17□□□□□ -1.9
YBX3-210ENST00000540975 F11RQ9Y624 299 aaKnown RBP3.17□□□□□ -1.9
YBX3-210ENST00000540975 DENND4AQ7Z401 1863 aa3.17□□□□□ -1.9
YBX3-210ENST00000540975 KIAA1551Q9HCM1 1747 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 IGLV2-18A0A075B6J9 118 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 A0A0J9YY10 115 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 A0A1B0GW55 424 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 A0A1B0GX78 115 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 DHRS12A0PJE2 317 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms