RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 HLA-DQA2P01906 255 aa10.65□□□□□ -0.7
DDX55-206ENST00000539934 CCL3P10147 92 aa10.65□□□□□ -0.7
DDX55-206ENST00000539934 ATP1B3P54709 279 aa10.65□□□□□ -0.7
DDX55-206ENST00000539934 TPPP2P59282 170 aa10.65□□□□□ -0.7
DDX55-206ENST00000539934 PLP2Q04941 152 aa10.65□□□□□ -0.7
DDX55-206ENST00000539934 PNRC1Q12796 327 aaPredicted RBP10.65□□□□□ -0.7
DDX55-206ENST00000539934 OR8B8Q15620 311 aa10.65□□□□□ -0.7
DDX55-206ENST00000539934 ZNF260Q3ZCT1 412 aa10.65□□□□□ -0.7
DDX55-206ENST00000539934 MIDNQ504T8 468 aa10.65□□□□□ -0.7
DDX55-206ENST00000539934 ACTL10Q5JWF8 245 aa10.65□□□□□ -0.7
DDX55-206ENST00000539934 Q6ZWC4 215 aa10.65□□□□□ -0.7
DDX55-206ENST00000539934 OR6N2Q8NGY6 317 aa10.65□□□□□ -0.7
DDX55-206ENST00000539934 LGALS14Q8TCE9 139 aa10.65□□□□□ -0.7
DDX55-206ENST00000539934 ALKBH4Q9NXW9 302 aa10.65□□□□□ -0.7
DDX55-206ENST00000539934 HIVEP1P15822 2718 aa10.65□□□□□ -0.7
DDX55-206ENST00000539934 SVILO95425 2214 aa10.65□□□□□ -0.7
DDX55-206ENST00000539934 MLNRO43193 412 aa10.65□□□□□ -0.71
DDX55-206ENST00000539934 IGHMP01871 453 aa10.65□□□□□ -0.71
DDX55-206ENST00000539934 ISG15P05161 165 aa10.65□□□□□ -0.71
DDX55-206ENST00000539934 HLA-DOBP13765 273 aa10.65□□□□□ -0.71
DDX55-206ENST00000539934 THBS3P49746 956 aa10.65□□□□□ -0.71
DDX55-206ENST00000539934 CNN1P51911 297 aaKnown RBP10.65□□□□□ -0.71
DDX55-206ENST00000539934 UBE2MP61081 183 aaKnown RBP10.65□□□□□ -0.71
DDX55-206ENST00000539934 RHOBP62745 196 aa10.65□□□□□ -0.71
DDX55-206ENST00000539934 SIRPAP78324 504 aa10.65□□□□□ -0.71
DDX55-206ENST00000539934 DMKNQ6E0U4 476 aaPredicted RBP10.65□□□□□ -0.71
DDX55-206ENST00000539934 PP6455Q8WZ26 134 aa10.65□□□□□ -0.71
DDX55-206ENST00000539934 ABHD6Q9BV23 337 aa10.65□□□□□ -0.71
DDX55-206ENST00000539934 TMEM126AQ9H061 195 aa10.65□□□□□ -0.71
DDX55-206ENST00000539934 ST6GALNAC2Q9UJ37 374 aa10.65□□□□□ -0.71
DDX55-206ENST00000539934 MRPS28Q9Y2Q9 187 aaKnown RBP10.65□□□□□ -0.71
DDX55-206ENST00000539934 WSB1Q9Y6I7 421 aa10.65□□□□□ -0.71
DDX55-206ENST00000539934 LIPT2A6NK58 231 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 NPIPB5A8MRT5 1133 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 FABP5P3A8MUU1 101 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 MS4A18H0YCH9 400 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 EFNA2O43921 213 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 ABHD16AO95870 558 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 THBDP07204 575 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 EDNRAP25101 427 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 NPY1RP25929 384 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 EIF1AXP47813 144 aaKnown RBP10.64□□□□□ -0.71
DDX55-206ENST00000539934 YPEL3P61236 119 aaPredicted RBP10.64□□□□□ -0.71
DDX55-206ENST00000539934 POU3F1Q03052 451 aaPredicted RBP10.64□□□□□ -0.71
DDX55-206ENST00000539934 MYBPHQ13203 477 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 CDK5R1Q15078 307 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 MS4A18Q3C1V0 323 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 POC1AQ8NBT0 407 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 FCAMRQ8WWV6 532 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 SMIM19Q96E16 107 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 PGLYRP3Q96LB9 341 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 CABLES2Q9BTV7 478 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 C19orf24Q9BVV8 132 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 BANF2Q9H503 90 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 B9D1Q9UPM9 204 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 TRAV8-6A0A0B4J262 113 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 MAP1LC3B2A6NCE7 125 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 K7EP34 96 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 SLC16A7O60669 478 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 TACSTD2P09758 323 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 DAP3P51398 398 aaKnown RBP10.64□□□□□ -0.71
DDX55-206ENST00000539934 ADAM8P78325 824 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 ATXN7L3Q14CW9 347 aaPredicted RBP10.64□□□□□ -0.71
DDX55-206ENST00000539934 KIAA1644Q3SXP7 199 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 NRN1LQ496H8 165 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 TMEM211Q6ICI0 200 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 ANKRD16Q6P6B7 361 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 DPPA3Q6W0C5 159 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 CEACAM19Q7Z692 300 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 EMG1Q92979 244 aaKnown RBP10.64□□□□□ -0.71
DDX55-206ENST00000539934 IL22RA2Q969J5 263 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 STARD4Q96DR4 205 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 NIPSNAP3BQ9BS92 247 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 MAP1LC3BQ9GZQ8 125 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 WDR76Q9H967 626 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 MED29Q9NX70 200 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 JKAMPQ9P055 326 aa10.64□□□□□ -0.71
DDX55-206ENST00000539934 A0A0G2JK05 382 aa10.63□□□□□ -0.71
DDX55-206ENST00000539934 CENPVL3A0A0U1RRI6 287 aa10.63□□□□□ -0.71
DDX55-206ENST00000539934 A0A1W2PNR3 127 aa10.63□□□□□ -0.71
DDX55-206ENST00000539934 MSGN1A6NI15 193 aa10.63□□□□□ -0.71
DDX55-206ENST00000539934 SFTPDP35247 375 aa10.63□□□□□ -0.71
DDX55-206ENST00000539934 RPS27P42677 84 aaKnown RBP10.63□□□□□ -0.71
DDX55-206ENST00000539934 Q0VFX4 171 aa10.63□□□□□ -0.71
DDX55-206ENST00000539934 CDC20BQ86Y33 519 aa10.63□□□□□ -0.71
DDX55-206ENST00000539934 FNDC9Q8TBE3 224 aa10.63□□□□□ -0.71
DDX55-206ENST00000539934 MBD6Q96DN6 1003 aa10.63□□□□□ -0.71
DDX55-206ENST00000539934 AQP10Q96PS8 301 aa10.63□□□□□ -0.71
DDX55-206ENST00000539934 KLHDC2Q9Y2U9 406 aa10.63□□□□□ -0.71
DDX55-206ENST00000539934 TMEM14AQ9Y6G1 99 aa10.63□□□□□ -0.71
DDX55-206ENST00000539934 DOCK10Q96BY6 2186 aa10.63□□□□□ -0.71
DDX55-206ENST00000539934 GAGE12JA6NER3 117 aa10.62□□□□□ -0.71
DDX55-206ENST00000539934 F5H5K5 113 aa10.62□□□□□ -0.71
DDX55-206ENST00000539934 F2RL2O00254 374 aa10.62□□□□□ -0.71
DDX55-206ENST00000539934 HMGB3O15347 200 aaKnown RBP10.62□□□□□ -0.71
DDX55-206ENST00000539934 GAGE7O76087 117 aa10.62□□□□□ -0.71
DDX55-206ENST00000539934 FREM3P0C091 2139 aa10.62□□□□□ -0.71
DDX55-206ENST00000539934 GAGE12FP0CL80 117 aa10.62□□□□□ -0.71
DDX55-206ENST00000539934 GAGE12GP0CL81 117 aa10.62□□□□□ -0.71
DDX55-206ENST00000539934 GAGE12IP0CL82 117 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms