RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 ZNF525Q8N782 197 aa8.37□□□□□ -1.07
SPARC-209ENST00000539687 OR4A5Q8NH83 315 aa8.37□□□□□ -1.07
SPARC-209ENST00000539687 VSTM2AQ8TAG5 236 aa8.37□□□□□ -1.07
SPARC-209ENST00000539687 FAM213BQ8TBF2 198 aa8.37□□□□□ -1.07
SPARC-209ENST00000539687 H1FXQ92522 213 aaKnown RBP8.37□□□□□ -1.07
SPARC-209ENST00000539687 RAB1CQ92928 201 aa8.37□□□□□ -1.07
SPARC-209ENST00000539687 PCGF1Q9BSM1 259 aa8.37□□□□□ -1.07
SPARC-209ENST00000539687 WDR61Q9GZS3 305 aaKnown RBP8.37□□□□□ -1.07
SPARC-209ENST00000539687 TMEM140Q9NV12 185 aa8.37□□□□□ -1.07
SPARC-209ENST00000539687 MIOXQ9UGB7 285 aa8.37□□□□□ -1.07
SPARC-209ENST00000539687 FOXA2Q9Y261 457 aaPredicted RBP8.37□□□□□ -1.07
SPARC-209ENST00000539687 ZNF257Q9Y2Q1 563 aa8.37□□□□□ -1.07
SPARC-209ENST00000539687 FBXO7Q9Y3I1 522 aa8.37□□□□□ -1.07
SPARC-209ENST00000539687 APC2O95996 2303 aa8.36□□□□□ -1.07
SPARC-209ENST00000539687 KALRNO60229 2985 aa8.36□□□□□ -1.07
SPARC-209ENST00000539687 SVILO95425 2214 aa8.36□□□□□ -1.07
SPARC-209ENST00000539687 TRAV1-1A0A0B4J248 108 aa8.36□□□□□ -1.07
SPARC-209ENST00000539687 C15orf61A6NNL5 157 aa8.36□□□□□ -1.07
SPARC-209ENST00000539687 CD5P06127 495 aa8.36□□□□□ -1.07
SPARC-209ENST00000539687 H2AFB1P0C5Y9 115 aa8.36□□□□□ -1.07
SPARC-209ENST00000539687 TAGLN2P37802 199 aaKnown RBP8.36□□□□□ -1.07
SPARC-209ENST00000539687 GNG10P50151 68 aa8.36□□□□□ -1.07
SPARC-209ENST00000539687 ZNF137PP52743 207 aa8.36□□□□□ -1.07
SPARC-209ENST00000539687 DEFA5Q01523 94 aa8.36□□□□□ -1.07
SPARC-209ENST00000539687 IZUMO4Q1ZYL8 232 aa8.36□□□□□ -1.07
SPARC-209ENST00000539687 VWC2Q2TAL6 325 aa8.36□□□□□ -1.07
SPARC-209ENST00000539687 TMEM155Q4W5P6 130 aa8.36□□□□□ -1.07
SPARC-209ENST00000539687 TMEM200BQ69YZ2 307 aa8.36□□□□□ -1.07
SPARC-209ENST00000539687 CENPVQ7Z7K6 275 aaPredicted RBP8.36□□□□□ -1.07
SPARC-209ENST00000539687 PDPNQ86YL7 162 aa8.36□□□□□ -1.07
SPARC-209ENST00000539687 ODF3L1Q8IXM7 274 aa8.36□□□□□ -1.07
SPARC-209ENST00000539687 ZNF295-AS1Q8N0V1 137 aa8.36□□□□□ -1.07
SPARC-209ENST00000539687 ZNF709Q8N972 641 aa8.36□□□□□ -1.07
SPARC-209ENST00000539687 OR9G1Q8NH87 305 aa8.36□□□□□ -1.07
SPARC-209ENST00000539687 NEIL1Q96FI4 390 aaPredicted RBP8.36□□□□□ -1.07
SPARC-209ENST00000539687 SH3BGRL3Q9H299 93 aa8.36□□□□□ -1.07
SPARC-209ENST00000539687 NARFLQ9H6Q4 476 aa8.36□□□□□ -1.07
SPARC-209ENST00000539687 SLC35D1Q9NTN3 355 aa8.36□□□□□ -1.07
SPARC-209ENST00000539687 KIAA1456Q9P272 454 aa8.36□□□□□ -1.07
SPARC-209ENST00000539687 ACACAQ13085 2346 aa8.36□□□□□ -1.07
SPARC-209ENST00000539687 TANC2Q9HCD6 1990 aa8.35□□□□□ -1.07
SPARC-209ENST00000539687 DYSFO75923 2080 aa8.35□□□□□ -1.07
SPARC-209ENST00000539687 SLC31A2O15432 143 aa8.35□□□□□ -1.07
SPARC-209ENST00000539687 PROP1O75360 226 aa8.35□□□□□ -1.07
SPARC-209ENST00000539687 IFNA1P01562 189 aa8.35□□□□□ -1.07
SPARC-209ENST00000539687 ARG1P05089 322 aa8.35□□□□□ -1.07
SPARC-209ENST00000539687 LOXP28300 417 aaPredicted RBP8.35□□□□□ -1.07
SPARC-209ENST00000539687 MC5RP33032 325 aa8.35□□□□□ -1.07
SPARC-209ENST00000539687 PRRX1P54821 245 aa8.35□□□□□ -1.07
SPARC-209ENST00000539687 OR2B8PP59922 312 aa8.35□□□□□ -1.07
SPARC-209ENST00000539687 TFF3Q07654 80 aa8.35□□□□□ -1.07
SPARC-209ENST00000539687 ZNF273Q14593 569 aa8.35□□□□□ -1.07
SPARC-209ENST00000539687 GUK1Q16774 197 aa8.35□□□□□ -1.07
SPARC-209ENST00000539687 FAM53AQ6NSI3 398 aaPredicted RBP8.35□□□□□ -1.07
SPARC-209ENST00000539687 DUX4L9Q6RFH8 374 aaPredicted RBP8.35□□□□□ -1.07
SPARC-209ENST00000539687 THNSL2Q86YJ6 484 aa8.35□□□□□ -1.07
SPARC-209ENST00000539687 MRPL41Q8IXM3 137 aaKnown RBP8.35□□□□□ -1.07
SPARC-209ENST00000539687 OR8B3Q8NGG8 313 aa8.35□□□□□ -1.07
SPARC-209ENST00000539687 OR10X1Q8NGY0 326 aa8.35□□□□□ -1.07
SPARC-209ENST00000539687 TAF15Q92804 592 aaKnown RBP eCLIP8.35□□□□□ -1.07
SPARC-209ENST00000539687 NEUROG1Q92886 237 aa8.35□□□□□ -1.07
SPARC-209ENST00000539687 RHOVQ96L33 236 aa8.35□□□□□ -1.07
SPARC-209ENST00000539687 OR8B2Q96RD0 313 aa8.35□□□□□ -1.07
SPARC-209ENST00000539687 DCAF16Q9NXF7 216 aa8.35□□□□□ -1.07
SPARC-209ENST00000539687 BET1LQ9NYM9 111 aa8.35□□□□□ -1.07
SPARC-209ENST00000539687 AMMECR1Q9Y4X0 333 aaPredicted RBP8.35□□□□□ -1.07
SPARC-209ENST00000539687 FNDC10F2Z333 226 aa8.34□□□□□ -1.07
SPARC-209ENST00000539687 J3QR06 171 aa8.34□□□□□ -1.07
SPARC-209ENST00000539687 NDUFS6O75380 124 aaKnown RBP8.34□□□□□ -1.07
SPARC-209ENST00000539687 TSPAN9O75954 239 aa8.34□□□□□ -1.07
SPARC-209ENST00000539687 IGHV2-70P01814 119 aa8.34□□□□□ -1.07
SPARC-209ENST00000539687 OR9G9P0C7N8 305 aa8.34□□□□□ -1.07
SPARC-209ENST00000539687 HOXA1P49639 335 aaPredicted RBP8.34□□□□□ -1.07
SPARC-209ENST00000539687 HSPE1P61604 102 aaKnown RBP8.34□□□□□ -1.07
SPARC-209ENST00000539687 RELBQ01201 579 aa8.34□□□□□ -1.07
SPARC-209ENST00000539687 TMEM41BQ5BJD5 291 aa8.34□□□□□ -1.07
SPARC-209ENST00000539687 ZGRF1Q86YA3 2104 aa8.34□□□□□ -1.07
SPARC-209ENST00000539687 ZCCHC24Q8N2G6 241 aaKnown RBP8.34□□□□□ -1.07
SPARC-209ENST00000539687 ZNF383Q8NA42 475 aa8.34□□□□□ -1.07
SPARC-209ENST00000539687 OR13D1Q8NGV5 346 aa8.34□□□□□ -1.07
SPARC-209ENST00000539687 OR5B3Q8NH48 314 aa8.34□□□□□ -1.07
SPARC-209ENST00000539687 C8orf46Q8TAG6 207 aa8.34□□□□□ -1.07
SPARC-209ENST00000539687 QTRT1Q9BXR0 403 aaKnown RBP8.34□□□□□ -1.07
SPARC-209ENST00000539687 NKX6-2Q9C056 277 aaPredicted RBP8.34□□□□□ -1.07
SPARC-209ENST00000539687 EIF5A2Q9GZV4 153 aaKnown RBP8.34□□□□□ -1.07
SPARC-209ENST00000539687 HEYLQ9NQ87 328 aaPredicted RBP8.34□□□□□ -1.07
SPARC-209ENST00000539687 TMEM14BQ9NUH8 114 aa8.34□□□□□ -1.07
SPARC-209ENST00000539687 UBE2L5PA0A1B0GUS4 154 aa8.33□□□□□ -1.08
SPARC-209ENST00000539687 MEX3AA1L020 520 aaKnown RBP8.33□□□□□ -1.08
SPARC-209ENST00000539687 H7C2Y5 167 aa8.33□□□□□ -1.08
SPARC-209ENST00000539687 PLAUP00749 431 aa8.33□□□□□ -1.08
SPARC-209ENST00000539687 IFNA10P01566 189 aa8.33□□□□□ -1.08
SPARC-209ENST00000539687 SFTA3P0C7M3 94 aa8.33□□□□□ -1.08
SPARC-209ENST00000539687 IGHV1-8P0DP01 117 aa8.33□□□□□ -1.08
SPARC-209ENST00000539687 VDAC2P45880 294 aaPredicted RBP8.33□□□□□ -1.08
SPARC-209ENST00000539687 DLK1P80370 383 aa8.33□□□□□ -1.08
SPARC-209ENST00000539687 PMS2P11Q13670 270 aa8.33□□□□□ -1.08
SPARC-209ENST00000539687 TMEM177Q53S58 311 aa8.33□□□□□ -1.08
SPARC-209ENST00000539687 OR8G2PQ6IF36 304 aa8.33□□□□□ -1.08
SPARC-209ENST00000539687 OR4A47Q6IF82 309 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms