RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 ABHD14BQ96IU4 210 aa7.34□□□□□ -1.23
DDB1-213ENST00000539332 NAA60Q9H7X0 242 aa7.34□□□□□ -1.23
DDB1-213ENST00000539332 UBTD1Q9HAC8 227 aa7.34□□□□□ -1.23
DDB1-213ENST00000539332 SAP30LQ9HAJ7 183 aa7.34□□□□□ -1.23
DDB1-213ENST00000539332 TRAPPC2LQ9UL33 140 aa7.34□□□□□ -1.23
DDB1-213ENST00000539332 PPP1R3CQ9UQK1 317 aa7.34□□□□□ -1.23
DDB1-213ENST00000539332 LSM5Q9Y4Y9 91 aaKnown RBP7.34□□□□□ -1.23
DDB1-213ENST00000539332 PUS1Q9Y606 427 aaKnown RBP eCLIP7.34□□□□□ -1.23
DDB1-213ENST00000539332 IGHV3OR15-7A0A075B7D8 119 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 SMCO3A2RU48 225 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 C12orf77C9JDV5 145 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 H3BQ15 152 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 DVL1O14640 695 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 HSPA12AO43301 675 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 HIST1H2BKO60814 126 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 TFF1P04155 84 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 HIST1H2BJP06899 126 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 OR13C7P0DN81 318 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 HIST1H2BOP23527 126 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 GNRHRP30968 328 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 HIST1H2BBP33778 126 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 GLIPR1P48060 266 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 PPOXP50336 477 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 HIST1H2BDP58876 126 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 FXYD4P59646 89 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 HIST1H2BCP62807 126 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 TMEM187Q14656 261 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 ELOBQ15370 118 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 HIST2H2BEQ16778 126 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.33□□□□□ -1.24
DDB1-213ENST00000539332 ZNF788Q6ZQV5 615 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 FOXRED2Q8IWF2 684 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 C1orf87Q8N0U7 546 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 RTN4IP1Q8WWV3 396 aaPredicted RBP7.33□□□□□ -1.24
DDB1-213ENST00000539332 HIST1H2BHQ93079 126 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 HIST1H2BNQ99877 126 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 HIST1H2BMQ99879 126 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 NIPSNAP3BQ9BS92 247 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 PITPNC1Q9UKF7 332 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 LAMP3Q9UQV4 416 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 FBXO7Q9Y3I1 522 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 OR2W1Q9Y3N9 320 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 TRAV39A0A0B4J263 110 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 A0A1B0GV90 55 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 C15orf65H3BRN8 121 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 ST8SIA3O43173 380 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 CYB5R3P00387 301 aaPredicted RBP7.33□□□□□ -1.24
DDB1-213ENST00000539332 MBPP02686 304 aaPredicted RBP7.33□□□□□ -1.24
DDB1-213ENST00000539332 TLE4Q04727 773 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 AESQ08117 197 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 GNMTQ14749 295 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 ZNF506Q5JVG8 444 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 AKR1C8PQ5T2L2 129 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 TGIF2LYQ8IUE0 185 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 CCDC71LQ8N9Z2 235 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 OR10J5Q8NHC4 309 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 FAM213BQ8TBF2 198 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 RNASEH2CQ8TDP1 164 aaKnown RBP7.33□□□□□ -1.24
DDB1-213ENST00000539332 RAB39BQ96DA2 213 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 GNPNAT1Q96EK6 184 aaPredicted RBP7.33□□□□□ -1.24
DDB1-213ENST00000539332 RCC1LQ96I51 464 aaKnown RBP7.33□□□□□ -1.24
DDB1-213ENST00000539332 GAFA1Q96PS6 74 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 SMIM3Q9BZL3 60 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 FAM234AQ9H0X4 552 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 PLEKHF2Q9H8W4 249 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 SLC35D1Q9NTN3 355 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 OR1A1Q9P1Q5 309 aa7.33□□□□□ -1.24
DDB1-213ENST00000539332 YLPM1P49750 1951 aaKnown RBP7.32□□□□□ -1.24
DDB1-213ENST00000539332 ODAMA1E959 279 aa7.32□□□□□ -1.24
DDB1-213ENST00000539332 LRRC30A6NM36 301 aa7.32□□□□□ -1.24
DDB1-213ENST00000539332 TMEM178BH3BS89 294 aa7.32□□□□□ -1.24
DDB1-213ENST00000539332 TNFRSF13BO14836 293 aaPredicted RBP7.32□□□□□ -1.24
DDB1-213ENST00000539332 PITX3O75364 302 aa7.32□□□□□ -1.24
DDB1-213ENST00000539332 TNFRSF6BO95407 300 aa7.32□□□□□ -1.24
DDB1-213ENST00000539332 FSTL3O95633 263 aa7.32□□□□□ -1.24
DDB1-213ENST00000539332 LY86O95711 162 aa7.32□□□□□ -1.24
DDB1-213ENST00000539332 CGB3P0DN86 165 aa7.32□□□□□ -1.24
DDB1-213ENST00000539332 CGB7P0DN87 165 aa7.32□□□□□ -1.24
DDB1-213ENST00000539332 COL8A1P27658 744 aa7.32□□□□□ -1.24
DDB1-213ENST00000539332 MSMO1Q15800 293 aa7.32□□□□□ -1.24
DDB1-213ENST00000539332 ABCA11PQ4W5N1 156 aa7.32□□□□□ -1.24
DDB1-213ENST00000539332 FAM201AQ5SY85 155 aa7.32□□□□□ -1.24
DDB1-213ENST00000539332 ZNF818PQ6ZRF7 136 aa7.32□□□□□ -1.24
DDB1-213ENST00000539332 ZNF429Q86V71 674 aa7.32□□□□□ -1.24
DDB1-213ENST00000539332 LGI3Q8N145 548 aa7.32□□□□□ -1.24
DDB1-213ENST00000539332 OR10V1Q8NGI7 309 aa7.32□□□□□ -1.24
DDB1-213ENST00000539332 OR5D13Q8NGL4 314 aa7.32□□□□□ -1.24
DDB1-213ENST00000539332 OR13A1Q8NGR1 328 aa7.32□□□□□ -1.24
DDB1-213ENST00000539332 MSI2Q96DH6 328 aaKnown RBP7.32□□□□□ -1.24
DDB1-213ENST00000539332 PSMG3-AS1Q96PY0 264 aa7.32□□□□□ -1.24
DDB1-213ENST00000539332 SLC25A31Q9H0C2 315 aa7.32□□□□□ -1.24
DDB1-213ENST00000539332 KCNIP1Q9NZI2 227 aa7.32□□□□□ -1.24
DDB1-213ENST00000539332 TRAV38-1A0A0B4J264 116 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 PIGBOS1A0A0B4J2F0 54 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 HSD17B6O14756 317 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 MPPED1O15442 326 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 IGLV2-14P01704 120 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 HBZP02008 142 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 SRP19P09132 144 aaKnown RBP7.31□□□□□ -1.24
DDB1-213ENST00000539332 OR5AC1P0C628 307 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms