RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 ANXA3P12429 323 aa9.92□□□□□ -0.82
CLSTN3-208ENST00000538933 PAX6P26367 422 aa9.92□□□□□ -0.82
CLSTN3-208ENST00000538933 THBS3P49746 956 aa9.92□□□□□ -0.82
CLSTN3-208ENST00000538933 SSX2Q16385 188 aa9.92□□□□□ -0.82
CLSTN3-208ENST00000538933 LRRC75BQ2VPJ9 315 aa9.92□□□□□ -0.82
CLSTN3-208ENST00000538933 C4orf46Q504U0 113 aa9.92□□□□□ -0.82
CLSTN3-208ENST00000538933 TPTE2P1Q5T6R2 138 aa9.92□□□□□ -0.82
CLSTN3-208ENST00000538933 ZNF66Q6ZN08 573 aa9.92□□□□□ -0.82
CLSTN3-208ENST00000538933 LHFPL4Q7Z7J7 247 aa9.92□□□□□ -0.82
CLSTN3-208ENST00000538933 MOB3BQ86TA1 216 aa9.92□□□□□ -0.82
CLSTN3-208ENST00000538933 TBC1D26Q86UD7 250 aa9.92□□□□□ -0.82
CLSTN3-208ENST00000538933 BVESQ8NE79 360 aa9.92□□□□□ -0.82
CLSTN3-208ENST00000538933 RTN4IP1Q8WWV3 396 aaPredicted RBP9.92□□□□□ -0.82
CLSTN3-208ENST00000538933 MRGPRFQ96AM1 343 aa9.92□□□□□ -0.82
CLSTN3-208ENST00000538933 ADTRPQ96IZ2 230 aa9.92□□□□□ -0.82
CLSTN3-208ENST00000538933 HSD17B10Q99714 261 aaKnown RBP9.92□□□□□ -0.82
CLSTN3-208ENST00000538933 C5orf66Q9H5L9 145 aa9.92□□□□□ -0.82
CLSTN3-208ENST00000538933 LIN7CQ9NUP9 197 aaKnown RBP9.92□□□□□ -0.82
CLSTN3-208ENST00000538933 GAB2Q9UQC2 676 aa9.92□□□□□ -0.82
CLSTN3-208ENST00000538933 KCNIP3Q9Y2W7 256 aa9.92□□□□□ -0.82
CLSTN3-208ENST00000538933 PLECQ15149 4684 aaKnown RBP9.92□□□□□ -0.82
CLSTN3-208ENST00000538933 OOSP1A8MZH6 123 aa9.91□□□□□ -0.82
CLSTN3-208ENST00000538933 H7C2Y5 167 aa9.91□□□□□ -0.82
CLSTN3-208ENST00000538933 PEX14O75381 377 aa9.91□□□□□ -0.82
CLSTN3-208ENST00000538933 PGLYRP1O75594 196 aaPredicted RBP9.91□□□□□ -0.82
CLSTN3-208ENST00000538933 DUS4LO95620 317 aaKnown RBP9.91□□□□□ -0.82
CLSTN3-208ENST00000538933 ANXA7P20073 488 aaKnown RBP9.91□□□□□ -0.82
CLSTN3-208ENST00000538933 VAMP1P23763 118 aa9.91□□□□□ -0.82
CLSTN3-208ENST00000538933 RND3P61587 244 aa9.91□□□□□ -0.82
CLSTN3-208ENST00000538933 ZNF833PQ6ZTB9 187 aa9.91□□□□□ -0.82
CLSTN3-208ENST00000538933 ODF3L1Q8IXM7 274 aa9.91□□□□□ -0.82
CLSTN3-208ENST00000538933 DRAXINQ8NBI3 349 aaPredicted RBP9.91□□□□□ -0.82
CLSTN3-208ENST00000538933 MUC7Q8TAX7 377 aa9.91□□□□□ -0.82
CLSTN3-208ENST00000538933 MALSU1Q96EH3 234 aa9.91□□□□□ -0.82
CLSTN3-208ENST00000538933 RTBDNQ9BSG5 229 aaPredicted RBP9.91□□□□□ -0.82
CLSTN3-208ENST00000538933 MRPL20Q9BYC9 149 aaKnown RBP9.91□□□□□ -0.82
CLSTN3-208ENST00000538933 GPN1Q9HCN4 374 aaPredicted RBP9.91□□□□□ -0.82
CLSTN3-208ENST00000538933 A0A1W2PRX2 142 aa9.9□□□□□ -0.82
CLSTN3-208ENST00000538933 MPPED1O15442 326 aa9.9□□□□□ -0.82
CLSTN3-208ENST00000538933 SPNP16150 400 aa9.9□□□□□ -0.82
CLSTN3-208ENST00000538933 BRS3P32247 399 aa9.9□□□□□ -0.82
CLSTN3-208ENST00000538933 KIR2DS2P43631 304 aa9.9□□□□□ -0.82
CLSTN3-208ENST00000538933 ZNF137PP52743 207 aa9.9□□□□□ -0.82
CLSTN3-208ENST00000538933 UBE2MP61081 183 aaKnown RBP9.9□□□□□ -0.82
CLSTN3-208ENST00000538933 ZNF816Q0VGE8 651 aaPredicted RBP9.9□□□□□ -0.82
CLSTN3-208ENST00000538933 RTL8BQ17RB0 113 aa9.9□□□□□ -0.82
CLSTN3-208ENST00000538933 TMEM128Q5BJH2 165 aa9.9□□□□□ -0.82
CLSTN3-208ENST00000538933 OR2B11Q5JQS5 317 aa9.9□□□□□ -0.82
CLSTN3-208ENST00000538933 TCTEX1D4Q5JR98 221 aa9.9□□□□□ -0.82
CLSTN3-208ENST00000538933 LIAT1Q6ZQX7 453 aa9.9□□□□□ -0.82
CLSTN3-208ENST00000538933 Q6ZS46 218 aa9.9□□□□□ -0.82
CLSTN3-208ENST00000538933 OR8H3Q8N146 312 aa9.9□□□□□ -0.82
CLSTN3-208ENST00000538933 ADAD2Q8NCV1 583 aaKnown RBP9.9□□□□□ -0.82
CLSTN3-208ENST00000538933 GPHA2Q96T91 129 aa9.9□□□□□ -0.82
CLSTN3-208ENST00000538933 NAA60Q9H7X0 242 aa9.9□□□□□ -0.82
CLSTN3-208ENST00000538933 SLC35D1Q9NTN3 355 aa9.9□□□□□ -0.82
CLSTN3-208ENST00000538933 IGHV1-3A0A0C4DH29 117 aa9.89□□□□□ -0.83
CLSTN3-208ENST00000538933 C3orf85A0A1B0GTC6 90 aa9.89□□□□□ -0.83
CLSTN3-208ENST00000538933 CRYM-AS1A6NIL9 109 aa9.89□□□□□ -0.83
CLSTN3-208ENST00000538933 PRAF2O60831 178 aa9.89□□□□□ -0.83
CLSTN3-208ENST00000538933 FCGR3BO75015 233 aa9.89□□□□□ -0.83
CLSTN3-208ENST00000538933 IGLV2-14P01704 120 aa9.89□□□□□ -0.83
CLSTN3-208ENST00000538933 HLA-AP01891 365 aaKnown RBP9.89□□□□□ -0.83
CLSTN3-208ENST00000538933 SERPINE2P07093 398 aa9.89□□□□□ -0.83
CLSTN3-208ENST00000538933 OR4E1P0C645 316 aa9.89□□□□□ -0.83
CLSTN3-208ENST00000538933 RRASP10301 218 aa9.89□□□□□ -0.83
CLSTN3-208ENST00000538933 F2RP25116 425 aa9.89□□□□□ -0.83
CLSTN3-208ENST00000538933 DUTP33316 252 aaKnown RBP9.89□□□□□ -0.83
CLSTN3-208ENST00000538933 RAB13P51153 203 aa9.89□□□□□ -0.83
CLSTN3-208ENST00000538933 TAGLNQ01995 201 aaKnown RBP9.89□□□□□ -0.83
CLSTN3-208ENST00000538933 DIAPH2-AS1Q14236 149 aa9.89□□□□□ -0.83
CLSTN3-208ENST00000538933 HES1Q14469 280 aa9.89□□□□□ -0.83
CLSTN3-208ENST00000538933 OXA1LQ15070 435 aa9.89□□□□□ -0.83
CLSTN3-208ENST00000538933 GLDNQ6ZMI3 551 aaPredicted RBP9.89□□□□□ -0.83
CLSTN3-208ENST00000538933 SLC25A42Q86VD7 318 aa9.89□□□□□ -0.83
CLSTN3-208ENST00000538933 SPAG16Q8N0X2 631 aa9.89□□□□□ -0.83
CLSTN3-208ENST00000538933 CASTOR1Q8WTX7 329 aa9.89□□□□□ -0.83
CLSTN3-208ENST00000538933 CHPT1Q8WUD6 406 aa9.89□□□□□ -0.83
CLSTN3-208ENST00000538933 ST6GALNAC6Q969X2 333 aa9.89□□□□□ -0.83
CLSTN3-208ENST00000538933 C5orf30Q96GV9 206 aa9.89□□□□□ -0.83
CLSTN3-208ENST00000538933 NABP2Q9BQ15 211 aa9.89□□□□□ -0.83
CLSTN3-208ENST00000538933 ZNF251Q9BRH9 671 aa9.89□□□□□ -0.83
CLSTN3-208ENST00000538933 MARVELD1Q9BSK0 173 aa9.89□□□□□ -0.83
CLSTN3-208ENST00000538933 LSM4Q9Y4Z0 139 aaKnown RBP9.89□□□□□ -0.83
CLSTN3-208ENST00000538933 FRAS1Q86XX4 4008 aa9.89□□□□□ -0.83
CLSTN3-208ENST00000538933 IGHV3-72A0A0B4J1Y9 119 aa9.88□□□□□ -0.83
CLSTN3-208ENST00000538933 H0Y980 276 aa9.88□□□□□ -0.83
CLSTN3-208ENST00000538933 LY6LH3BQJ8 138 aa9.88□□□□□ -0.83
CLSTN3-208ENST00000538933 B3GALNT1O75752 331 aa9.88□□□□□ -0.83
CLSTN3-208ENST00000538933 OR5AC1P0C628 307 aa9.88□□□□□ -0.83
CLSTN3-208ENST00000538933 CT45A6P0DMU7 189 aa9.88□□□□□ -0.83
CLSTN3-208ENST00000538933 CT45A5P0DMU8 189 aa9.88□□□□□ -0.83
CLSTN3-208ENST00000538933 CT45A7P0DMV0 189 aa9.88□□□□□ -0.83
CLSTN3-208ENST00000538933 MC5RP33032 325 aa9.88□□□□□ -0.83
CLSTN3-208ENST00000538933 DHODHQ02127 395 aa9.88□□□□□ -0.83
CLSTN3-208ENST00000538933 PPP1R1AQ13522 171 aa9.88□□□□□ -0.83
CLSTN3-208ENST00000538933 LYG2Q86SG7 212 aa9.88□□□□□ -0.83
CLSTN3-208ENST00000538933 TCTEX1D1Q8N7M0 179 aa9.88□□□□□ -0.83
CLSTN3-208ENST00000538933 OR4S2Q8NH73 311 aa9.88□□□□□ -0.83
CLSTN3-208ENST00000538933 RNASE11Q8TAA1 199 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms