RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 PFDN1O60925 122 aa11.39□□□□□ -0.59
CD4-208ENST00000538827 KRASP01116 189 aa11.39□□□□□ -0.59
CD4-208ENST00000538827 MC5RP33032 325 aa11.39□□□□□ -0.59
CD4-208ENST00000538827 BRWD1-AS2P59051 145 aa11.39□□□□□ -0.59
CD4-208ENST00000538827 RPS16P62249 146 aaKnown RBP11.39□□□□□ -0.59
CD4-208ENST00000538827 TAGLNQ01995 201 aaKnown RBP11.39□□□□□ -0.59
CD4-208ENST00000538827 KRTAP1-1Q07627 177 aa11.39□□□□□ -0.59
CD4-208ENST00000538827 HES1Q14469 280 aa11.39□□□□□ -0.59
CD4-208ENST00000538827 LRTM2Q8N967 370 aa11.39□□□□□ -0.59
CD4-208ENST00000538827 NANPQ8TBE9 248 aa11.39□□□□□ -0.59
CD4-208ENST00000538827 RRNAD1Q96FB5 475 aaKnown RBP11.39□□□□□ -0.59
CD4-208ENST00000538827 PLEKHA2Q9HB19 425 aa11.39□□□□□ -0.59
CD4-208ENST00000538827 NUP50Q9UKX7 468 aa11.39□□□□□ -0.59
CD4-208ENST00000538827 SOX21Q9Y651 276 aaPredicted RBP11.39□□□□□ -0.59
CD4-208ENST00000538827 ZANQ9Y493 2812 aa11.38□□□□□ -0.59
CD4-208ENST00000538827 A0A0G2JRQ6 117 aa11.38□□□□□ -0.59
CD4-208ENST00000538827 DBX1A6NMT0 343 aa11.38□□□□□ -0.59
CD4-208ENST00000538827 MARCH11A6NNE9 402 aa11.38□□□□□ -0.59
CD4-208ENST00000538827 CRLF1O75462 422 aa11.38□□□□□ -0.59
CD4-208ENST00000538827 CCNKO75909 580 aa11.38□□□□□ -0.59
CD4-208ENST00000538827 SCGB1D2O95969 90 aa11.38□□□□□ -0.59
CD4-208ENST00000538827 HRASP01112 189 aa11.38□□□□□ -0.59
CD4-208ENST00000538827 IGKV1D-33P01593 117 aa11.38□□□□□ -0.59
CD4-208ENST00000538827 IGKV1-33P01594 117 aa11.38□□□□□ -0.59
CD4-208ENST00000538827 IGKV1-5P01602 117 aa11.38□□□□□ -0.59
CD4-208ENST00000538827 IGKV1-16P04430 117 aa11.38□□□□□ -0.59
CD4-208ENST00000538827 SNRNP70P08621 437 aaKnown RBP11.38□□□□□ -0.59
CD4-208ENST00000538827 NQO2P16083 231 aa11.38□□□□□ -0.59
CD4-208ENST00000538827 CD24P25063 80 aa11.38□□□□□ -0.59
CD4-208ENST00000538827 IZUMO4Q1ZYL8 232 aa11.38□□□□□ -0.59
CD4-208ENST00000538827 VKORC1L1Q8N0U8 176 aa11.38□□□□□ -0.59
CD4-208ENST00000538827 CFHR4Q92496 578 aa11.38□□□□□ -0.59
CD4-208ENST00000538827 FLYWCH2Q96CP2 140 aaKnown RBP11.38□□□□□ -0.59
CD4-208ENST00000538827 SPIN2AQ99865 258 aa11.38□□□□□ -0.59
CD4-208ENST00000538827 SPIN2BQ9BPZ2 258 aa11.38□□□□□ -0.59
CD4-208ENST00000538827 ZNF436Q9C0F3 470 aaPredicted RBP11.38□□□□□ -0.59
CD4-208ENST00000538827 TMED3Q9Y3Q3 217 aa11.38□□□□□ -0.59
CD4-208ENST00000538827 MDFIC2A0A1B0GVS7 189 aa11.37□□□□□ -0.59
CD4-208ENST00000538827 MPTX1A8MV57 137 aa11.37□□□□□ -0.59
CD4-208ENST00000538827 NXPH3O95157 252 aa11.37□□□□□ -0.59
CD4-208ENST00000538827 VENTXO95231 258 aa11.37□□□□□ -0.59
CD4-208ENST00000538827 FSHBP01225 129 aa11.37□□□□□ -0.59
CD4-208ENST00000538827 FBP1P09467 338 aa11.37□□□□□ -0.59
CD4-208ENST00000538827 VDAC1P21796 283 aa11.37□□□□□ -0.59
CD4-208ENST00000538827 BRS3P32247 399 aa11.37□□□□□ -0.59
CD4-208ENST00000538827 SRP14P37108 136 aaKnown RBP11.37□□□□□ -0.59
CD4-208ENST00000538827 HNF4GQ14541 408 aa11.37□□□□□ -0.59
CD4-208ENST00000538827 IAH1Q2TAA2 248 aaPredicted RBP11.37□□□□□ -0.59
CD4-208ENST00000538827 TMEM177Q53S58 311 aa11.37□□□□□ -0.59
CD4-208ENST00000538827 H2BFWTQ7Z2G1 175 aa11.37□□□□□ -0.59
CD4-208ENST00000538827 TEX29Q8N6K0 151 aa11.37□□□□□ -0.59
CD4-208ENST00000538827 OR4C13Q8NGP0 309 aa11.37□□□□□ -0.59
CD4-208ENST00000538827 OSR1Q8TAX0 266 aaPredicted RBP11.37□□□□□ -0.59
CD4-208ENST00000538827 CHAC2Q8WUX2 184 aa11.37□□□□□ -0.59
CD4-208ENST00000538827 C22orf15Q8WYQ4 148 aa11.37□□□□□ -0.59
CD4-208ENST00000538827 GPR146Q96CH1 333 aa11.37□□□□□ -0.59
CD4-208ENST00000538827 AJUBAQ96IF1 538 aa11.37□□□□□ -0.59
CD4-208ENST00000538827 SEC22AQ96IW7 307 aa11.37□□□□□ -0.59
CD4-208ENST00000538827 GSKIPQ9P0R6 139 aa11.37□□□□□ -0.59
CD4-208ENST00000538827 SAA1P0DJI8 122 aaPredicted RBP11.36□□□□□ -0.59
CD4-208ENST00000538827 TMEM11P17152 192 aa11.36□□□□□ -0.59
CD4-208ENST00000538827 HNF1AP20823 631 aa11.36□□□□□ -0.59
CD4-208ENST00000538827 CD1BP29016 333 aa11.36□□□□□ -0.59
CD4-208ENST00000538827 H2BFSP57053 126 aa11.36□□□□□ -0.59
CD4-208ENST00000538827 OR2B8PP59922 312 aa11.36□□□□□ -0.59
CD4-208ENST00000538827 VMA21Q3ZAQ7 101 aa11.36□□□□□ -0.59
CD4-208ENST00000538827 FAM120AOSQ5T036 256 aa11.36□□□□□ -0.59
CD4-208ENST00000538827 FAM219AQ8IW50 185 aa11.36□□□□□ -0.59
CD4-208ENST00000538827 ZBTB8BQ8NAP8 495 aaPredicted RBP11.36□□□□□ -0.59
CD4-208ENST00000538827 OR1S1Q8NH92 325 aa11.36□□□□□ -0.59
CD4-208ENST00000538827 LSM10Q969L4 123 aaKnown RBP11.36□□□□□ -0.59
CD4-208ENST00000538827 OR10C1Q96KK4 312 aa11.36□□□□□ -0.59
CD4-208ENST00000538827 RANBP3Q9H6Z4 567 aaPredicted RBP11.36□□□□□ -0.59
CD4-208ENST00000538827 RANGRFQ9HD47 186 aaPredicted RBP11.36□□□□□ -0.59
CD4-208ENST00000538827 TMEM140Q9NV12 185 aa11.36□□□□□ -0.59
CD4-208ENST00000538827 CACNG5Q9UF02 275 aa11.36□□□□□ -0.59
CD4-208ENST00000538827 MMP24Q9Y5R2 645 aa11.36□□□□□ -0.59
CD4-208ENST00000538827 SONP18583 2426 aaKnown RBP11.36□□□□□ -0.59
CD4-208ENST00000538827 SLC25A17O43808 307 aa11.35□□□□□ -0.59
CD4-208ENST00000538827 RBMXL2O75526 392 aaKnown RBP11.35□□□□□ -0.59
CD4-208ENST00000538827 MOSP00540 346 aa11.35□□□□□ -0.59
CD4-208ENST00000538827 GIPP09681 153 aaPredicted RBP11.35□□□□□ -0.59
CD4-208ENST00000538827 CNTFRP26992 372 aa11.35□□□□□ -0.59
CD4-208ENST00000538827 BPIFB3P59826 476 aa11.35□□□□□ -0.59
CD4-208ENST00000538827 S100A10P60903 97 aa11.35□□□□□ -0.59
CD4-208ENST00000538827 LRRC75BQ2VPJ9 315 aa11.35□□□□□ -0.59
CD4-208ENST00000538827 NMSQ5H8A3 153 aa11.35□□□□□ -0.59
CD4-208ENST00000538827 BCL6BQ8N143 479 aaPredicted RBP11.35□□□□□ -0.59
CD4-208ENST00000538827 OR2T10Q8NGZ9 312 aa11.35□□□□□ -0.59
CD4-208ENST00000538827 WDR89Q96FK6 387 aaPredicted RBP11.35□□□□□ -0.59
CD4-208ENST00000538827 RHOVQ96L33 236 aa11.35□□□□□ -0.59
CD4-208ENST00000538827 C2orf50Q96LR7 162 aa11.35□□□□□ -0.59
CD4-208ENST00000538827 TSNAXQ99598 290 aaKnown RBP11.35□□□□□ -0.59
CD4-208ENST00000538827 NSG2Q9Y328 171 aa11.35□□□□□ -0.59
CD4-208ENST00000538827 SMLR1H3BR10 107 aa11.34□□□□□ -0.59
CD4-208ENST00000538827 OR9G9P0C7N8 305 aa11.34□□□□□ -0.59
CD4-208ENST00000538827 HLA-GP17693 338 aa11.34□□□□□ -0.59
CD4-208ENST00000538827 RAP2BP61225 183 aa11.34□□□□□ -0.59
CD4-208ENST00000538827 CD300CQ08708 224 aa11.34□□□□□ -0.59
CD4-208ENST00000538827 HABP2Q14520 560 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms