RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 COMPP49747 757 aaPredicted RBP7.6□□□□□ -1.19
SNHG1-209ENST00000538654 COX19Q49B96 90 aa7.6□□□□□ -1.19
SNHG1-209ENST00000538654 LHFPL4Q7Z7J7 247 aa7.6□□□□□ -1.19
SNHG1-209ENST00000538654 LRP11Q86VZ4 500 aa7.6□□□□□ -1.19
SNHG1-209ENST00000538654 TCTEX1D1Q8N7M0 179 aa7.6□□□□□ -1.19
SNHG1-209ENST00000538654 ZNF738Q8NE65 137 aa7.6□□□□□ -1.19
SNHG1-209ENST00000538654 GSX1Q9H4S2 264 aaPredicted RBP7.6□□□□□ -1.19
SNHG1-209ENST00000538654 IL36BQ9NZH7 164 aa7.6□□□□□ -1.19
SNHG1-209ENST00000538654 FER1L5A0AVI2 2057 aa7.6□□□□□ -1.19
SNHG1-209ENST00000538654 A0A0U1RRA0 63 aa7.6□□□□□ -1.19
SNHG1-209ENST00000538654 DUX1O43812 170 aa7.6□□□□□ -1.19
SNHG1-209ENST00000538654 CD33P20138 364 aa7.6□□□□□ -1.19
SNHG1-209ENST00000538654 LINC00310P59036 64 aa7.6□□□□□ -1.19
SNHG1-209ENST00000538654 RBPJQ06330 500 aa7.6□□□□□ -1.19
SNHG1-209ENST00000538654 VWC2Q2TAL6 325 aa7.6□□□□□ -1.19
SNHG1-209ENST00000538654 Q6ZN92 141 aa7.6□□□□□ -1.19
SNHG1-209ENST00000538654 MOB1BQ7L9L4 216 aa7.6□□□□□ -1.19
SNHG1-209ENST00000538654 ZIC4Q8N9L1 334 aa7.6□□□□□ -1.19
SNHG1-209ENST00000538654 STARD4Q96DR4 205 aa7.6□□□□□ -1.19
SNHG1-209ENST00000538654 OR2H1Q9GZK4 316 aa7.6□□□□□ -1.19
SNHG1-209ENST00000538654 FGF21Q9NSA1 209 aa7.6□□□□□ -1.19
SNHG1-209ENST00000538654 MMP17Q9ULZ9 603 aa7.6□□□□□ -1.19
SNHG1-209ENST00000538654 RTTNQ86VV8 2226 aa7.6□□□□□ -1.19
SNHG1-209ENST00000538654 F5P12259 2224 aa7.6□□□□□ -1.19
SNHG1-209ENST00000538654 SAA2-SAA4A0A096LPE2 208 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 IGHV3-15A0A0B4J1V0 119 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 OOEPA6NGQ2 149 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 GJE1A6NN92 205 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.59□□□□□ -1.19
SNHG1-209ENST00000538654 CCL25O15444 150 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 TRAPPC6AO75865 159 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 NDUFB8O95169 186 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 MT-ND6P03923 174 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 REG1AP05451 166 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 GPX1P07203 203 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 CA3P07451 260 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 CBLN1P23435 193 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 OR1D5P58170 312 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 KRTDAPP60985 99 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 PSG4Q00888 419 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 MORN2Q502X0 79 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 STPG4Q8N801 248 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 STXBP6Q8NFX7 210 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 ZNF501Q96CX3 271 aaPredicted RBP7.59□□□□□ -1.19
SNHG1-209ENST00000538654 ZNF837Q96EG3 531 aaPredicted RBP7.59□□□□□ -1.19
SNHG1-209ENST00000538654 TMEM204Q9BSN7 226 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 QTRT1Q9BXR0 403 aaKnown RBP7.59□□□□□ -1.19
SNHG1-209ENST00000538654 BET1LQ9NYM9 111 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 RBM7Q9Y580 266 aaKnown RBP7.59□□□□□ -1.19
SNHG1-209ENST00000538654 F2RL2O00254 374 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 FCN1O00602 326 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 HSPB6O14558 160 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 ZNF253O75346 499 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 IGLC2P0DOY2 106 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 IGLC3P0DOY3 106 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 BMP5P22003 454 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 PCOLCEQ15113 449 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 ZNF585BQ52M93 769 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 OR10J3Q5JRS4 329 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 ZDHHC23Q8IYP9 409 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 FGFRL1Q8N441 504 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 OR1L6Q8NGR2 347 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 RDH5Q92781 318 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 OR6C1Q96RD1 312 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 C1QTNF5Q9BXJ0 243 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 GNB1LQ9BYB4 327 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 PPP1R3CQ9UQK1 317 aa7.59□□□□□ -1.19
SNHG1-209ENST00000538654 MRPS16Q9Y3D3 137 aaKnown RBP7.59□□□□□ -1.19
SNHG1-209ENST00000538654 IGHV1OR21-1A0A087WYE8 117 aa7.59□□□□□ -1.2
SNHG1-209ENST00000538654 LMO7DNF2Z398 122 aa7.59□□□□□ -1.2
SNHG1-209ENST00000538654 M0R296 226 aa7.59□□□□□ -1.2
SNHG1-209ENST00000538654 CRYAAP02489 173 aa7.59□□□□□ -1.2
SNHG1-209ENST00000538654 AMY1AP04745 511 aa7.59□□□□□ -1.2
SNHG1-209ENST00000538654 CCL7P80098 99 aa7.59□□□□□ -1.2
SNHG1-209ENST00000538654 CEACAM21Q3KPI0 293 aa7.59□□□□□ -1.2
SNHG1-209ENST00000538654 MYPOPQ86VE0 399 aaPredicted RBP7.59□□□□□ -1.2
SNHG1-209ENST00000538654 Q8NA96 180 aa7.59□□□□□ -1.2
SNHG1-209ENST00000538654 OR5B3Q8NH48 314 aa7.59□□□□□ -1.2
SNHG1-209ENST00000538654 MRGPRDQ8TDS7 321 aa7.59□□□□□ -1.2
SNHG1-209ENST00000538654 UBTD1Q9HAC8 227 aa7.59□□□□□ -1.2
SNHG1-209ENST00000538654 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.59□□□□□ -1.2
SNHG1-209ENST00000538654 CDC42EP3Q9UKI2 254 aa7.59□□□□□ -1.2
SNHG1-209ENST00000538654 KCNS2Q9ULS6 477 aa7.59□□□□□ -1.2
SNHG1-209ENST00000538654 COX11Q9Y6N1 276 aa7.59□□□□□ -1.2
SNHG1-209ENST00000538654 LY96Q9Y6Y9 160 aa7.59□□□□□ -1.2
SNHG1-209ENST00000538654 KIAA1549Q9HCM3 1950 aa7.58□□□□□ -1.2
SNHG1-209ENST00000538654 PRSS29PA6NIE9 313 aa7.58□□□□□ -1.2
SNHG1-209ENST00000538654 RBFOX2O43251 390 aaKnown RBP eCLIP7.58□□□□□ -1.2
SNHG1-209ENST00000538654 HYPMO75409 117 aa7.58□□□□□ -1.2
SNHG1-209ENST00000538654 NTF4P34130 210 aa7.58□□□□□ -1.2
SNHG1-209ENST00000538654 DSCR4P56555 118 aaPredicted RBP7.58□□□□□ -1.2
SNHG1-209ENST00000538654 SEC61GP60059 68 aa7.58□□□□□ -1.2
SNHG1-209ENST00000538654 RPEL1Q2QD12 228 aa7.58□□□□□ -1.2
SNHG1-209ENST00000538654 HLA-DRB5Q30154 266 aa7.58□□□□□ -1.2
SNHG1-209ENST00000538654 DEFB133Q30KQ1 61 aa7.58□□□□□ -1.2
SNHG1-209ENST00000538654 SPATA46Q5T0L3 261 aa7.58□□□□□ -1.2
SNHG1-209ENST00000538654 OR5A2Q8NGI9 324 aa7.58□□□□□ -1.2
SNHG1-209ENST00000538654 IL1F10Q8WWZ1 152 aa7.58□□□□□ -1.2
SNHG1-209ENST00000538654 DEFB126Q9BYW3 111 aa7.58□□□□□ -1.2
SNHG1-209ENST00000538654 C19orf25Q9UFG5 118 aaPredicted RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms