RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 CD207Q9UJ71 328 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 SH3BGRL2Q9UJC5 107 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 RPH3ALQ9UNE2 315 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 WDR83OSQ9Y284 106 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 IGKV1-27A0A075B6S5 117 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 IGKV1D-13A0A0B4J2D9 117 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 GRIFINA4D1Z8 144 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 PMS2P5A8MQ11 134 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 FNDC10F2Z333 226 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 F5H5K5 113 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 G3V4G9 280 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 M0R1X1 148 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 ISLRO14498 428 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 TAX1BP3O14907 124 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 SLC31A1O15431 190 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 OR7C1O76099 320 aaPredicted RBP5.61□□□□□ -1.51
USP28-207ENST00000538475 CA2P00918 260 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 CGAP01215 116 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 STAG3L2P0CL84 134 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 STAG3L3P0CL85 134 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 IGKV1-13P0DP09 117 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 IL11P20809 199 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 CBLN1P23435 193 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 FASLGP48023 281 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 HINT1P49773 126 aaPredicted RBP5.61□□□□□ -1.51
USP28-207ENST00000538475 TMPRSS3P57727 454 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 PAX2Q02962 417 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 HHEXQ03014 270 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 NRN1LQ496H8 165 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 SPANXN5Q5MJ07 72 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.61□□□□□ -1.51
USP28-207ENST00000538475 FAM69BQ5VUD6 431 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 PCSK4Q6UW60 755 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 TMEM136Q6ZRR5 245 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 PRR22Q8IZ63 422 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 ZNF321PQ8N8H1 164 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 OR52L2PQ8NGH6 319 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 OR2AE1Q8NHA4 323 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 OR1F12Q8NHA8 337 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 OCC1Q8TAD7 63 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 CPT1CQ8TCG5 803 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 SLC37A2Q8TED4 501 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 DYRK2Q92630 601 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 TSACCQ96A04 125 aaPredicted RBP5.61□□□□□ -1.51
USP28-207ENST00000538475 NABP1Q96AH0 204 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 EMC6Q9BV81 110 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 SF3B5Q9BWJ5 86 aaKnown RBP5.61□□□□□ -1.51
USP28-207ENST00000538475 ZNF430Q9H8G1 570 aaPredicted RBP5.61□□□□□ -1.51
USP28-207ENST00000538475 SLC25A10Q9UBX3 287 aaPredicted RBP5.61□□□□□ -1.51
USP28-207ENST00000538475 NAT8BQ9UHF3 227 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 SMPXQ9UHP9 88 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 OR51B2Q9Y5P1 312 aa5.61□□□□□ -1.51
USP28-207ENST00000538475 DIDO1Q9BTC0 2240 aaKnown RBP5.6□□□□□ -1.51
USP28-207ENST00000538475 ESPL1Q14674 2120 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 PTPRBP23467 1997 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 IGKV1-12A0A0C4DH73 117 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 A0A0G2JRQ6 117 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 hCG_38984A0A1B0GV85 526 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 SMIM27A0A1W2PRY6 76 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 GAGE12BA1L429 117 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 C10orf142B7Z368 130 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 E9PLN8 166 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 RAB29O14966 203 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 RBFOX2O43251 390 aaKnown RBP eCLIP5.6□□□□□ -1.51
USP28-207ENST00000538475 SPRY1O43609 319 aaPredicted RBP5.6□□□□□ -1.51
USP28-207ENST00000538475 SYNGR3O43761 229 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 ANGPTL7O43827 346 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 OR2J3O76001 311 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 IGKV1-5P01602 117 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 IGKV1D-12P01611 117 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 JMJD7P0C870 316 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 P0C879 139 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 PSG2P11465 335 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 CRYBB3P26998 211 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 CDAP32320 146 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 VIPR2P41587 438 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 IER3P46695 156 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 CAPZBP47756 277 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 ZNF83P51522 516 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 CCR5P51681 352 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 UBE2G1P62253 170 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 HIST1H1AQ02539 215 aaPredicted RBP5.6□□□□□ -1.51
USP28-207ENST00000538475 RBPJQ06330 500 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 CLEC12BQ2HXU8 276 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 PIGYQ3MUY2 71 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 KRTCAP3Q53RY4 240 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 PHYHD1Q5SRE7 291 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 OR4A47Q6IF82 309 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 SLC25A34Q6PIV7 304 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 RD3Q7Z3Z2 195 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 ATP5L2Q7Z4Y8 100 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 DEFB128Q7Z7B8 93 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 OR5A2Q8NGI9 324 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 OR5A1Q8NGJ0 315 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 CCL4L1Q8NHW4 92 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 TSKUQ8WUA8 353 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 TMEM190Q8WZ59 177 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 BCL2L2Q92843 193 aaPredicted RBP5.6□□□□□ -1.51
USP28-207ENST00000538475 NAT6Q93015 286 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 C19orf24Q9BVV8 132 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms