RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 NQO2P16083 231 aa11.54□□□□□ -0.56
LIMK1-208ENST00000538333 SPCS3P61009 180 aa11.54□□□□□ -0.56
LIMK1-208ENST00000538333 RPS16P62249 146 aaKnown RBP11.54□□□□□ -0.56
LIMK1-208ENST00000538333 TFF3Q07654 80 aa11.54□□□□□ -0.56
LIMK1-208ENST00000538333 PMS2P11Q13670 270 aa11.54□□□□□ -0.56
LIMK1-208ENST00000538333 RNF212Q495C1 297 aa11.54□□□□□ -0.56
LIMK1-208ENST00000538333 DIRC2Q96SL1 478 aa11.54□□□□□ -0.56
LIMK1-208ENST00000538333 MAP1LC3BQ9GZQ8 125 aa11.54□□□□□ -0.56
LIMK1-208ENST00000538333 KLF2Q9Y5W3 355 aaPredicted RBP11.54□□□□□ -0.56
LIMK1-208ENST00000538333 YLPM1P49750 1951 aaKnown RBP11.54□□□□□ -0.56
LIMK1-208ENST00000538333 ZFP92A6NM28 416 aa11.54□□□□□ -0.56
LIMK1-208ENST00000538333 ZNF729A6NN14 1252 aaPredicted RBP11.54□□□□□ -0.56
LIMK1-208ENST00000538333 MMP23AO75900 390 aa11.54□□□□□ -0.56
LIMK1-208ENST00000538333 TSPAN9O75954 239 aa11.54□□□□□ -0.56
LIMK1-208ENST00000538333 LY86O95711 162 aa11.54□□□□□ -0.56
LIMK1-208ENST00000538333 IFNA17P01571 189 aa11.54□□□□□ -0.56
LIMK1-208ENST00000538333 IRF2P14316 349 aa11.54□□□□□ -0.56
LIMK1-208ENST00000538333 FGF7P21781 194 aa11.54□□□□□ -0.56
LIMK1-208ENST00000538333 PLA2G5P39877 138 aa11.54□□□□□ -0.56
LIMK1-208ENST00000538333 HNF4GQ14541 408 aa11.54□□□□□ -0.56
LIMK1-208ENST00000538333 FAM90A2PQ658T7 463 aa11.54□□□□□ -0.56
LIMK1-208ENST00000538333 ZNF429Q86V71 674 aa11.54□□□□□ -0.56
LIMK1-208ENST00000538333 RAB39BQ96DA2 213 aa11.54□□□□□ -0.56
LIMK1-208ENST00000538333 YPEL4Q96NS1 127 aa11.54□□□□□ -0.56
LIMK1-208ENST00000538333 NPCDR1Q9BY65 106 aa11.54□□□□□ -0.56
LIMK1-208ENST00000538333 IDI2-AS1Q9NZ38 188 aa11.54□□□□□ -0.56
LIMK1-208ENST00000538333 CEP295Q9C0D2 2601 aa11.53□□□□□ -0.56
LIMK1-208ENST00000538333 TRAV3A0A0B4J244 114 aa11.53□□□□□ -0.56
LIMK1-208ENST00000538333 TNFRSF1AP19438 455 aa11.53□□□□□ -0.56
LIMK1-208ENST00000538333 VDAC2P45880 294 aaPredicted RBP11.53□□□□□ -0.56
LIMK1-208ENST00000538333 CEBPGP53567 150 aa11.53□□□□□ -0.56
LIMK1-208ENST00000538333 ERVK-16P61578 105 aa11.53□□□□□ -0.56
LIMK1-208ENST00000538333 HABP2Q14520 560 aaPredicted RBP11.53□□□□□ -0.56
LIMK1-208ENST00000538333 SSX8Q7RTT4 187 aa11.53□□□□□ -0.56
LIMK1-208ENST00000538333 ZCCHC24Q8N2G6 241 aaKnown RBP11.53□□□□□ -0.56
LIMK1-208ENST00000538333 Q8N7P7 452 aa11.53□□□□□ -0.56
LIMK1-208ENST00000538333 OR4A16Q8NH70 328 aa11.53□□□□□ -0.56
LIMK1-208ENST00000538333 OR4S2Q8NH73 311 aa11.53□□□□□ -0.56
LIMK1-208ENST00000538333 CA5BP1Q8WTZ4 195 aa11.53□□□□□ -0.56
LIMK1-208ENST00000538333 FAM122AQ96E09 287 aa11.53□□□□□ -0.56
LIMK1-208ENST00000538333 SAV1Q9H4B6 383 aaPredicted RBP11.53□□□□□ -0.56
LIMK1-208ENST00000538333 TMEM140Q9NV12 185 aa11.53□□□□□ -0.56
LIMK1-208ENST00000538333 MAS1LP35410 378 aa11.52□□□□□ -0.56
LIMK1-208ENST00000538333 ZNF383Q8NA42 475 aa11.52□□□□□ -0.56
LIMK1-208ENST00000538333 PIEZO2Q9H5I5 2752 aa11.52□□□□□ -0.56
LIMK1-208ENST00000538333 ATXN7O15265 892 aaPredicted RBP11.52□□□□□ -0.57
LIMK1-208ENST00000538333 EIF3GO75821 320 aaKnown RBP eCLIP11.52□□□□□ -0.57
LIMK1-208ENST00000538333 THBS3P49746 956 aa11.52□□□□□ -0.57
LIMK1-208ENST00000538333 MRPS11P82912 194 aaKnown RBP11.52□□□□□ -0.57
LIMK1-208ENST00000538333 TMEM30BQ3MIR4 351 aa11.52□□□□□ -0.57
LIMK1-208ENST00000538333 ADAM5Q6NVV9 412 aa11.52□□□□□ -0.57
LIMK1-208ENST00000538333 SLC35E3Q7Z769 313 aa11.52□□□□□ -0.57
LIMK1-208ENST00000538333 ZFP82Q8N141 532 aa11.52□□□□□ -0.57
LIMK1-208ENST00000538333 NIPSNAP3BQ9BS92 247 aa11.52□□□□□ -0.57
LIMK1-208ENST00000538333 SLC39A9Q9NUM3 307 aa11.52□□□□□ -0.57
LIMK1-208ENST00000538333 RPUSD1Q9UJJ7 312 aaKnown RBP11.52□□□□□ -0.57
LIMK1-208ENST00000538333 A0A087WWC5 75 aa11.51□□□□□ -0.57
LIMK1-208ENST00000538333 PRSS46E5RG02 174 aa11.51□□□□□ -0.57
LIMK1-208ENST00000538333 TMPRSS2O15393 492 aa11.51□□□□□ -0.57
LIMK1-208ENST00000538333 FCN3O75636 299 aa11.51□□□□□ -0.57
LIMK1-208ENST00000538333 MBP02144 154 aa11.51□□□□□ -0.57
LIMK1-208ENST00000538333 DLK1P80370 383 aa11.51□□□□□ -0.57
LIMK1-208ENST00000538333 SLC25A48Q6ZT89 311 aaKnown RBP11.51□□□□□ -0.57
LIMK1-208ENST00000538333 LYG1Q8N1E2 194 aa11.51□□□□□ -0.57
LIMK1-208ENST00000538333 FAM24BQ8N5W8 94 aa11.51□□□□□ -0.57
LIMK1-208ENST00000538333 C2CD4CQ8TF44 421 aa11.51□□□□□ -0.57
LIMK1-208ENST00000538333 LHX4Q969G2 390 aa11.51□□□□□ -0.57
LIMK1-208ENST00000538333 TVP23CQ96ET8 276 aa11.51□□□□□ -0.57
LIMK1-208ENST00000538333 P2RX4Q99571 388 aa11.51□□□□□ -0.57
LIMK1-208ENST00000538333 VAX2Q9UIW0 290 aa11.51□□□□□ -0.57
LIMK1-208ENST00000538333 WDR83OSQ9Y284 106 aa11.51□□□□□ -0.57
LIMK1-208ENST00000538333 LINC00312Q9Y6C7 94 aa11.51□□□□□ -0.57
LIMK1-208ENST00000538333 PTPRQQ9UMZ3 2332 aa11.51□□□□□ -0.57
LIMK1-208ENST00000538333 ADGRG4Q8IZF6 3080 aa11.51□□□□□ -0.57
LIMK1-208ENST00000538333 ROS1P08922 2347 aa11.51□□□□□ -0.57
LIMK1-208ENST00000538333 CTXND1A0A1B0GTU2 59 aa11.51□□□□□ -0.57
LIMK1-208ENST00000538333 RAB11AP62491 216 aa11.51□□□□□ -0.57
LIMK1-208ENST00000538333 TLE1Q04724 770 aa11.51□□□□□ -0.57
LIMK1-208ENST00000538333 FFAR4Q5NUL3 377 aa11.51□□□□□ -0.57
LIMK1-208ENST00000538333 TMEM170AQ8WVE7 144 aa11.51□□□□□ -0.57
LIMK1-208ENST00000538333 ZCCHC14Q8WYQ9 949 aaKnown RBP11.51□□□□□ -0.57
LIMK1-208ENST00000538333 ADTRPQ96IZ2 230 aa11.51□□□□□ -0.57
LIMK1-208ENST00000538333 RHOVQ96L33 236 aa11.51□□□□□ -0.57
LIMK1-208ENST00000538333 WFIKKN1Q96NZ8 548 aa11.51□□□□□ -0.57
LIMK1-208ENST00000538333 SLC25A22Q9H936 323 aa11.51□□□□□ -0.57
LIMK1-208ENST00000538333 BIN3Q9NQY0 253 aa11.51□□□□□ -0.57
LIMK1-208ENST00000538333 PRELID1Q9Y255 219 aa11.51□□□□□ -0.57
LIMK1-208ENST00000538333 hCG_1809904A0A1W2PP81 198 aa11.5□□□□□ -0.57
LIMK1-208ENST00000538333 A0A1W2PR64 198 aa11.5□□□□□ -0.57
LIMK1-208ENST00000538333 A0A1W2PRV1 198 aa11.5□□□□□ -0.57
LIMK1-208ENST00000538333 C15orf61A6NNL5 157 aa11.5□□□□□ -0.57
LIMK1-208ENST00000538333 RAB5AP20339 215 aa11.5□□□□□ -0.57
LIMK1-208ENST00000538333 AGAP20933 346 aa11.5□□□□□ -0.57
LIMK1-208ENST00000538333 POU2AF1Q16633 256 aa11.5□□□□□ -0.57
LIMK1-208ENST00000538333 OR10G9Q8NGN4 311 aa11.5□□□□□ -0.57
LIMK1-208ENST00000538333 OR10G7Q8NGN6 311 aa11.5□□□□□ -0.57
LIMK1-208ENST00000538333 TCF19Q9Y242 345 aa11.5□□□□□ -0.57
LIMK1-208ENST00000538333 TRAV38-1A0A0B4J264 116 aa11.5□□□□□ -0.57
LIMK1-208ENST00000538333 TRGV8A0A0C4DH27 118 aa11.5□□□□□ -0.57
LIMK1-208ENST00000538333 hADV38S2A0JD32 116 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms