RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 SPOCK3Q9BQ16 436 aa9.53□□□□□ -0.88
LINC00346-201ENST00000538077 ZNF383Q8NA42 475 aa9.53□□□□□ -0.88
LINC00346-201ENST00000538077 C9orf106Q8NAJ2 232 aa9.53□□□□□ -0.88
LINC00346-201ENST00000538077 RHOVQ96L33 236 aa9.53□□□□□ -0.88
LINC00346-201ENST00000538077 OR51M1Q9H341 326 aa9.53□□□□□ -0.88
LINC00346-201ENST00000538077 TMEM218A2RU14 115 aa9.53□□□□□ -0.88
LINC00346-201ENST00000538077 FBLL1A6NHQ2 334 aaKnown RBP9.53□□□□□ -0.88
LINC00346-201ENST00000538077 LYRM7Q5U5X0 104 aa9.53□□□□□ -0.88
LINC00346-201ENST00000538077 OR4C13Q8NGP0 309 aa9.53□□□□□ -0.88
LINC00346-201ENST00000538077 GLMPQ8WWB7 406 aa9.53□□□□□ -0.88
LINC00346-201ENST00000538077 LTBRP36941 435 aa9.53□□□□□ -0.88
LINC00346-201ENST00000538077 MBNL2Q5VZF2 373 aaKnown RBP9.53□□□□□ -0.88
LINC00346-201ENST00000538077 LSM10Q969L4 123 aaKnown RBP9.53□□□□□ -0.88
LINC00346-201ENST00000538077 DUX3Q96PT4 197 aa9.53□□□□□ -0.88
LINC00346-201ENST00000538077 SLC25A33Q9BSK2 321 aa9.53□□□□□ -0.88
LINC00346-201ENST00000538077 LINC00305Q7Z4B0 112 aa9.53□□□□□ -0.88
LINC00346-201ENST00000538077 NPIPB3Q92617 1050 aa9.53□□□□□ -0.88
LINC00346-201ENST00000538077 PKIBQ9C010 78 aa9.53□□□□□ -0.88
LINC00346-201ENST00000538077 F11RQ9Y624 299 aaKnown RBP9.53□□□□□ -0.88
LINC00346-201ENST00000538077 TDRD6O60522 2096 aaKnown RBP9.52□□□□□ -0.88
LINC00346-201ENST00000538077 KLF4O43474 513 aa9.52□□□□□ -0.88
LINC00346-201ENST00000538077 HKR1P10072 659 aa9.52□□□□□ -0.88
LINC00346-201ENST00000538077 VDAC2P45880 294 aaPredicted RBP9.52□□□□□ -0.89
LINC00346-201ENST00000538077 ACP7Q6ZNF0 438 aa9.52□□□□□ -0.89
LINC00346-201ENST00000538077 GOLT1AQ6ZVE7 132 aa9.52□□□□□ -0.89
LINC00346-201ENST00000538077 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.52□□□□□ -0.89
LINC00346-201ENST00000538077 SMIM10L1P0DMW3 83 aa9.52□□□□□ -0.89
LINC00346-201ENST00000538077 FSTP19883 344 aa9.52□□□□□ -0.89
LINC00346-201ENST00000538077 HOXA6P31267 233 aa9.52□□□□□ -0.89
LINC00346-201ENST00000538077 MEIG1Q5JSS6 88 aa9.52□□□□□ -0.89
LINC00346-201ENST00000538077 SGMS2Q8NHU3 365 aa9.52□□□□□ -0.89
LINC00346-201ENST00000538077 SMIM10Q96HG1 83 aa9.52□□□□□ -0.89
LINC00346-201ENST00000538077 ZNF107Q9UII5 783 aaPredicted RBP9.52□□□□□ -0.89
LINC00346-201ENST00000538077 JPT1Q9UK76 154 aa9.52□□□□□ -0.89
LINC00346-201ENST00000538077 ZFP30Q9Y2G7 519 aa9.52□□□□□ -0.89
LINC00346-201ENST00000538077 ZNF729A6NN14 1252 aaPredicted RBP9.52□□□□□ -0.89
LINC00346-201ENST00000538077 CA2P00918 260 aa9.52□□□□□ -0.89
LINC00346-201ENST00000538077 ACAA1P09110 424 aaPredicted RBP9.52□□□□□ -0.89
LINC00346-201ENST00000538077 EGR4Q05215 589 aa9.52□□□□□ -0.89
LINC00346-201ENST00000538077 AQP3Q92482 292 aa9.52□□□□□ -0.89
LINC00346-201ENST00000538077 IGKV1D-43A0A0B4J1Z2 117 aa9.52□□□□□ -0.89
LINC00346-201ENST00000538077 TRBV5-5A0A0J9YX44 114 aa9.52□□□□□ -0.89
LINC00346-201ENST00000538077 MPDU1O75352 247 aa9.52□□□□□ -0.89
LINC00346-201ENST00000538077 CXCL2P19875 107 aa9.52□□□□□ -0.89
LINC00346-201ENST00000538077 CRYBB3P26998 211 aa9.52□□□□□ -0.89
LINC00346-201ENST00000538077 GPR183P32249 361 aa9.52□□□□□ -0.89
LINC00346-201ENST00000538077 FAM74A3Q4VXF1 159 aa9.52□□□□□ -0.89
LINC00346-201ENST00000538077 TMEM186Q96B77 213 aa9.52□□□□□ -0.89
LINC00346-201ENST00000538077 DNAJC4Q9NNZ3 241 aa9.52□□□□□ -0.89
LINC00346-201ENST00000538077 TNFSF18Q9UNG2 199 aa9.52□□□□□ -0.89
LINC00346-201ENST00000538077 IGHV2OR16-5A0A0B4J2B6 119 aa9.51□□□□□ -0.89
LINC00346-201ENST00000538077 TNFRSF9Q07011 255 aa9.51□□□□□ -0.89
LINC00346-201ENST00000538077 C7orf71A4D174 169 aa9.51□□□□□ -0.89
LINC00346-201ENST00000538077 GCM2O75603 506 aaPredicted RBP9.51□□□□□ -0.89
LINC00346-201ENST00000538077 BCL2P10415 239 aa9.51□□□□□ -0.89
LINC00346-201ENST00000538077 SMAGPQ0VAQ4 97 aa9.51□□□□□ -0.89
LINC00346-201ENST00000538077 DIRC3C9JPN6 131 aa9.51□□□□□ -0.89
LINC00346-201ENST00000538077 ASPHD2Q6ICH7 369 aa9.51□□□□□ -0.89
LINC00346-201ENST00000538077 FAM159AQ6UWV7 190 aa9.51□□□□□ -0.89
LINC00346-201ENST00000538077 PPP1R27Q86WC6 154 aa9.51□□□□□ -0.89
LINC00346-201ENST00000538077 LHFPL5Q8TAF8 219 aa9.51□□□□□ -0.89
LINC00346-201ENST00000538077 FBXL7Q9UJT9 491 aa9.51□□□□□ -0.89
LINC00346-201ENST00000538077 TRPM7Q96QT4 1865 aa9.51□□□□□ -0.89
LINC00346-201ENST00000538077 OR51G1Q8NGK1 321 aa9.51□□□□□ -0.89
LINC00346-201ENST00000538077 DMRTA2Q96SC8 542 aa9.51□□□□□ -0.89
LINC00346-201ENST00000538077 GP6Q9HCN6 339 aa9.51□□□□□ -0.89
LINC00346-201ENST00000538077 LGALS3P17931 250 aaKnown RBP9.51□□□□□ -0.89
LINC00346-201ENST00000538077 P2RY4P51582 365 aa9.51□□□□□ -0.89
LINC00346-201ENST00000538077 TIMM23BQ5SRD1 257 aa9.51□□□□□ -0.89
LINC00346-201ENST00000538077 SPACA3Q8IXA5 215 aa9.51□□□□□ -0.89
LINC00346-201ENST00000538077 WFIKKN1Q96NZ8 548 aa9.51□□□□□ -0.89
LINC00346-201ENST00000538077 TRAV30A0A087WSZ9 112 aa9.5□□□□□ -0.89
LINC00346-201ENST00000538077 TGFBR3LH3BV60 316 aa9.5□□□□□ -0.89
LINC00346-201ENST00000538077 DRAM1Q8N682 238 aa9.5□□□□□ -0.89
LINC00346-201ENST00000538077 B4DEV8 164 aa9.5□□□□□ -0.89
LINC00346-201ENST00000538077 SRD5A1P18405 259 aa9.5□□□□□ -0.89
LINC00346-201ENST00000538077 TMEM252Q8N6L7 170 aa9.5□□□□□ -0.89
LINC00346-201ENST00000538077 OR4X2Q8NGF9 303 aa9.5□□□□□ -0.89
LINC00346-201ENST00000538077 OR13C6PQ8NH95 151 aa9.5□□□□□ -0.89
LINC00346-201ENST00000538077 ZNF837Q96EG3 531 aaPredicted RBP9.5□□□□□ -0.89
LINC00346-201ENST00000538077 LINC01587Q99440 93 aa9.5□□□□□ -0.89
LINC00346-201ENST00000538077 TRAF4Q9BUZ4 470 aaPredicted RBP9.5□□□□□ -0.89
LINC00346-201ENST00000538077 ZNF236Q9UL36 1845 aa9.5□□□□□ -0.89
LINC00346-201ENST00000538077 TGIF2-C20orf24A0A0A6YYL0 155 aa9.5□□□□□ -0.89
LINC00346-201ENST00000538077 IGHMP01871 453 aa9.5□□□□□ -0.89
LINC00346-201ENST00000538077 MUC1P15941 1255 aaPredicted RBP9.5□□□□□ -0.89
LINC00346-201ENST00000538077 UMODP07911 640 aa9.5□□□□□ -0.89
LINC00346-201ENST00000538077 HSPE1P61604 102 aaKnown RBP9.5□□□□□ -0.89
LINC00346-201ENST00000538077 TAF15Q92804 592 aaKnown RBP eCLIP9.5□□□□□ -0.89
LINC00346-201ENST00000538077 WDYHV1Q96HA8 205 aa9.5□□□□□ -0.89
LINC00346-201ENST00000538077 RBM38Q9H0Z9 239 aaKnown RBP9.5□□□□□ -0.89
LINC00346-201ENST00000538077 PCM1Q15154 2024 aa9.5□□□□□ -0.89
LINC00346-201ENST00000538077 IGKV3D-20A0A0C4DH25 116 aa9.49□□□□□ -0.89
LINC00346-201ENST00000538077 M0R143 59 aa9.49□□□□□ -0.89
LINC00346-201ENST00000538077 C3orf36Q3SXR2 165 aa9.49□□□□□ -0.89
LINC00346-201ENST00000538077 LBHQ53QV2 105 aaPredicted RBP9.49□□□□□ -0.89
LINC00346-201ENST00000538077 APCDD1LQ8NCL9 501 aa9.49□□□□□ -0.89
LINC00346-201ENST00000538077 Q96M66 194 aa9.49□□□□□ -0.89
LINC00346-201ENST00000538077 SBF1O95248 1867 aa9.49□□□□□ -0.89
LINC00346-201ENST00000538077 LOC107984156A0A0G2JMH3 177 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms