RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 KIR2DS2P43631 304 aa12.56□□□□□ -0.4
SFSWAP-206ENST00000537582 H2BFSP57053 126 aa12.56□□□□□ -0.4
SFSWAP-206ENST00000537582 GGNBP1Q5YKI7 109 aa12.56□□□□□ -0.4
SFSWAP-206ENST00000537582 CCDC144NLQ6NUI1 221 aa12.56□□□□□ -0.4
SFSWAP-206ENST00000537582 PDPNQ86YL7 162 aa12.56□□□□□ -0.4
SFSWAP-206ENST00000537582 GRPEL2Q8TAA5 225 aa12.56□□□□□ -0.4
SFSWAP-206ENST00000537582 CD300LFQ8TDQ1 290 aa12.56□□□□□ -0.4
SFSWAP-206ENST00000537582 R3HDM4Q96D70 268 aa12.56□□□□□ -0.4
SFSWAP-206ENST00000537582 SEC22AQ96IW7 307 aa12.56□□□□□ -0.4
SFSWAP-206ENST00000537582 SHPKQ9UHJ6 478 aa12.56□□□□□ -0.4
SFSWAP-206ENST00000537582 FAM96BQ9Y3D0 163 aa12.56□□□□□ -0.4
SFSWAP-206ENST00000537582 BOLA1Q9Y3E2 137 aa12.56□□□□□ -0.4
SFSWAP-206ENST00000537582 ZFHX3Q15911 3703 aa12.55□□□□□ -0.4
SFSWAP-206ENST00000537582 FAM25EA8MYX2 175 aa12.55□□□□□ -0.4
SFSWAP-206ENST00000537582 HPRT1P00492 218 aa12.55□□□□□ -0.4
SFSWAP-206ENST00000537582 MC5RP33032 325 aa12.55□□□□□ -0.4
SFSWAP-206ENST00000537582 TAGLNQ01995 201 aaKnown RBP12.55□□□□□ -0.4
SFSWAP-206ENST00000537582 Q5BKY6 102 aa12.55□□□□□ -0.4
SFSWAP-206ENST00000537582 Q6ZRM9 215 aa12.55□□□□□ -0.4
SFSWAP-206ENST00000537582 TCTEX1D1Q8N7M0 179 aa12.55□□□□□ -0.4
SFSWAP-206ENST00000537582 PIFOQ8TCI5 191 aa12.55□□□□□ -0.4
SFSWAP-206ENST00000537582 FLYWCH2Q96CP2 140 aaKnown RBP12.55□□□□□ -0.4
SFSWAP-206ENST00000537582 HARBI1Q96MB7 349 aa12.55□□□□□ -0.4
SFSWAP-206ENST00000537582 ZNF48Q96MX3 618 aaPredicted RBP12.55□□□□□ -0.4
SFSWAP-206ENST00000537582 RANBP3Q9H6Z4 567 aaPredicted RBP12.55□□□□□ -0.4
SFSWAP-206ENST00000537582 PLEKHA2Q9HB19 425 aa12.55□□□□□ -0.4
SFSWAP-206ENST00000537582 MXRA5Q9NR99 2828 aa12.55□□□□□ -0.4
SFSWAP-206ENST00000537582 TRAV3A0A0B4J244 114 aa12.54□□□□□ -0.4
SFSWAP-206ENST00000537582 C13orf42A0A1B0GVH6 325 aa12.54□□□□□ -0.4
SFSWAP-206ENST00000537582 MARCH11A6NNE9 402 aa12.54□□□□□ -0.4
SFSWAP-206ENST00000537582 SHOXO15266 292 aa12.54□□□□□ -0.4
SFSWAP-206ENST00000537582 IGLV2-23P01705 113 aa12.54□□□□□ -0.4
SFSWAP-206ENST00000537582 CD1BP29016 333 aa12.54□□□□□ -0.4
SFSWAP-206ENST00000537582 AKR1C2P52895 323 aa12.54□□□□□ -0.4
SFSWAP-206ENST00000537582 RPS16P62249 146 aaKnown RBP12.54□□□□□ -0.4
SFSWAP-206ENST00000537582 SRPXP78539 464 aa12.54□□□□□ -0.4
SFSWAP-206ENST00000537582 HES1Q14469 280 aa12.54□□□□□ -0.4
SFSWAP-206ENST00000537582 TMEM177Q53S58 311 aa12.54□□□□□ -0.4
SFSWAP-206ENST00000537582 NMSQ5H8A3 153 aa12.54□□□□□ -0.4
SFSWAP-206ENST00000537582 LAMTOR1Q6IAA8 161 aa12.54□□□□□ -0.4
SFSWAP-206ENST00000537582 CLEC9AQ6UXN8 241 aa12.54□□□□□ -0.4
SFSWAP-206ENST00000537582 IL22RA2Q969J5 263 aa12.54□□□□□ -0.4
SFSWAP-206ENST00000537582 GPR146Q96CH1 333 aa12.54□□□□□ -0.4
SFSWAP-206ENST00000537582 EAF1Q96JC9 268 aaPredicted RBP12.54□□□□□ -0.4
SFSWAP-206ENST00000537582 OR10C1Q96KK4 312 aa12.54□□□□□ -0.4
SFSWAP-206ENST00000537582 CHIAQ9BZP6 476 aa12.54□□□□□ -0.4
SFSWAP-206ENST00000537582 MEGF9Q9H1U4 602 aa12.54□□□□□ -0.4
SFSWAP-206ENST00000537582 TPSG1Q9NRR2 321 aa12.54□□□□□ -0.4
SFSWAP-206ENST00000537582 FAM212BQ9NTI7 297 aaPredicted RBP12.54□□□□□ -0.4
SFSWAP-206ENST00000537582 FAM90A9PA6NNJ1 464 aa12.53□□□□□ -0.4
SFSWAP-206ENST00000537582 FBP1P09467 338 aa12.53□□□□□ -0.4
SFSWAP-206ENST00000537582 P0C879 139 aa12.53□□□□□ -0.4
SFSWAP-206ENST00000537582 RRASP10301 218 aa12.53□□□□□ -0.4
SFSWAP-206ENST00000537582 F2RL1P55085 397 aa12.53□□□□□ -0.4
SFSWAP-206ENST00000537582 DHRS7BQ6IAN0 325 aaPredicted RBP12.53□□□□□ -0.4
SFSWAP-206ENST00000537582 SLC7A5P1Q8MH63 180 aa12.53□□□□□ -0.4
SFSWAP-206ENST00000537582 C9orf62Q8N4C0 152 aa12.53□□□□□ -0.4
SFSWAP-206ENST00000537582 OR4C13Q8NGP0 309 aa12.53□□□□□ -0.4
SFSWAP-206ENST00000537582 OR5M8Q8NGP6 311 aa12.53□□□□□ -0.4
SFSWAP-206ENST00000537582 RAB18Q9NP72 206 aa12.53□□□□□ -0.4
SFSWAP-206ENST00000537582 COMMD9Q9P000 198 aa12.53□□□□□ -0.4
SFSWAP-206ENST00000537582 NSG2Q9Y328 171 aa12.53□□□□□ -0.4
SFSWAP-206ENST00000537582 NXPH3O95157 252 aa12.52□□□□□ -0.4
SFSWAP-206ENST00000537582 OR9G9P0C7N8 305 aa12.52□□□□□ -0.4
SFSWAP-206ENST00000537582 SAA1P0DJI8 122 aaPredicted RBP12.52□□□□□ -0.4
SFSWAP-206ENST00000537582 NQO2P16083 231 aa12.52□□□□□ -0.4
SFSWAP-206ENST00000537582 SRP14P37108 136 aaKnown RBP12.52□□□□□ -0.4
SFSWAP-206ENST00000537582 C9orf139Q6ZV77 190 aa12.52□□□□□ -0.4
SFSWAP-206ENST00000537582 DMBX1Q8NFW5 382 aa12.52□□□□□ -0.4
SFSWAP-206ENST00000537582 RNASE11Q8TAA1 199 aaKnown RBP12.52□□□□□ -0.4
SFSWAP-206ENST00000537582 RHOVQ96L33 236 aa12.52□□□□□ -0.4
SFSWAP-206ENST00000537582 SSX3Q99909 188 aa12.52□□□□□ -0.4
SFSWAP-206ENST00000537582 TMEM140Q9NV12 185 aa12.52□□□□□ -0.4
SFSWAP-206ENST00000537582 C5orf51A6NDU8 294 aa12.52□□□□□ -0.41
SFSWAP-206ENST00000537582 H3BUX3 64 aa12.52□□□□□ -0.41
SFSWAP-206ENST00000537582 SLC25A17O43808 307 aa12.52□□□□□ -0.41
SFSWAP-206ENST00000537582 MOSP00540 346 aa12.52□□□□□ -0.41
SFSWAP-206ENST00000537582 MYOD1P15172 320 aa12.52□□□□□ -0.41
SFSWAP-206ENST00000537582 VDAC1P21796 283 aa12.52□□□□□ -0.41
SFSWAP-206ENST00000537582 BPIFB3P59826 476 aa12.52□□□□□ -0.41
SFSWAP-206ENST00000537582 OR2B8PP59922 312 aa12.52□□□□□ -0.41
SFSWAP-206ENST00000537582 OR4A47Q6IF82 309 aa12.52□□□□□ -0.41
SFSWAP-206ENST00000537582 ZNF767PQ75MW2 155 aa12.52□□□□□ -0.41
SFSWAP-206ENST00000537582 TMEM219Q86XT9 240 aa12.52□□□□□ -0.41
SFSWAP-206ENST00000537582 Q8N6K4 173 aa12.52□□□□□ -0.41
SFSWAP-206ENST00000537582 OSR1Q8TAX0 266 aaPredicted RBP12.52□□□□□ -0.41
SFSWAP-206ENST00000537582 SMLR1H3BR10 107 aa12.51□□□□□ -0.41
SFSWAP-206ENST00000537582 IGHV4-59P01825 116 aa12.51□□□□□ -0.41
SFSWAP-206ENST00000537582 FOSL1P15407 271 aa12.51□□□□□ -0.41
SFSWAP-206ENST00000537582 TMEM11P17152 192 aa12.51□□□□□ -0.41
SFSWAP-206ENST00000537582 HLA-GP17693 338 aa12.51□□□□□ -0.41
SFSWAP-206ENST00000537582 BRS3P32247 399 aa12.51□□□□□ -0.41
SFSWAP-206ENST00000537582 PSG5Q15238 335 aa12.51□□□□□ -0.41
SFSWAP-206ENST00000537582 LY6EQ16553 131 aa12.51□□□□□ -0.41
SFSWAP-206ENST00000537582 IAH1Q2TAA2 248 aaPredicted RBP12.51□□□□□ -0.41
SFSWAP-206ENST00000537582 LRRC75BQ2VPJ9 315 aa12.51□□□□□ -0.41
SFSWAP-206ENST00000537582 OR2T10Q8NGZ9 312 aa12.51□□□□□ -0.41
SFSWAP-206ENST00000537582 RRNAD1Q96FB5 475 aaKnown RBP12.51□□□□□ -0.41
SFSWAP-206ENST00000537582 TNFRSF19Q9NS68 423 aa12.51□□□□□ -0.41
SFSWAP-206ENST00000537582 CACNG5Q9UF02 275 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms