RNA–Protein interactions for RNA: ENST00000537004.5

CLIP1-208, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-208ENST00000537004 CGB7P0DN87 165 aa9.76□□□□□ -0.85
CLIP1-208ENST00000537004 MMP9P14780 707 aa9.76□□□□□ -0.85
CLIP1-208ENST00000537004 LPAR6P43657 344 aa9.76□□□□□ -0.85
CLIP1-208ENST00000537004 CAV2P51636 162 aa9.76□□□□□ -0.85
CLIP1-208ENST00000537004 LOXL3P58215 753 aa9.76□□□□□ -0.85
CLIP1-208ENST00000537004 RPL30P62888 115 aaKnown RBP9.76□□□□□ -0.85
CLIP1-208ENST00000537004 EWSR1Q01844 656 aaKnown RBP eCLIP9.76□□□□□ -0.85
CLIP1-208ENST00000537004 Q3ZCU0 254 aa9.76□□□□□ -0.85
CLIP1-208ENST00000537004 TMEM155Q4W5P6 130 aa9.76□□□□□ -0.85
CLIP1-208ENST00000537004 MORN2Q502X0 79 aa9.76□□□□□ -0.85
CLIP1-208ENST00000537004 OR2B11Q5JQS5 317 aa9.76□□□□□ -0.85
CLIP1-208ENST00000537004 LYPD2Q6UXB3 125 aa9.76□□□□□ -0.85
CLIP1-208ENST00000537004 FAM234AQ9H0X4 552 aa9.76□□□□□ -0.85
CLIP1-208ENST00000537004 WFDC1Q9HC57 220 aa9.76□□□□□ -0.85
CLIP1-208ENST00000537004 TET2Q6N021 2002 aaPredicted RBP9.76□□□□□ -0.85
CLIP1-208ENST00000537004 BORCS7-ASMTA0A0B4J1R7 106 aa9.75□□□□□ -0.85
CLIP1-208ENST00000537004 IGSF23A1L1A6 192 aa9.75□□□□□ -0.85
CLIP1-208ENST00000537004 CHST1O43916 411 aa9.75□□□□□ -0.85
CLIP1-208ENST00000537004 YPEL1O60688 119 aa9.75□□□□□ -0.85
CLIP1-208ENST00000537004 TMEM50AO95807 157 aa9.75□□□□□ -0.85
CLIP1-208ENST00000537004 OMGP23515 440 aa9.75□□□□□ -0.85
CLIP1-208ENST00000537004 STPG2Q8N412 459 aa9.75□□□□□ -0.85
CLIP1-208ENST00000537004 TCTEX1D2Q8WW35 142 aa9.75□□□□□ -0.85
CLIP1-208ENST00000537004 YPEL2Q96QA6 119 aa9.75□□□□□ -0.85
CLIP1-208ENST00000537004 PPIAL4EA0A075B759 164 aa9.75□□□□□ -0.85
CLIP1-208ENST00000537004 TRGV10A0A0A0MS01 117 aa9.75□□□□□ -0.85
CLIP1-208ENST00000537004 C17orf98A8MV24 154 aa9.75□□□□□ -0.85
CLIP1-208ENST00000537004 PPIAL4DF5H284 164 aa9.75□□□□□ -0.85
CLIP1-208ENST00000537004 SIGLEC5O15389 551 aa9.75□□□□□ -0.85
CLIP1-208ENST00000537004 FBXO24O75426 580 aa9.75□□□□□ -0.85
CLIP1-208ENST00000537004 PPIAL4FP0DN26 164 aa9.75□□□□□ -0.85
CLIP1-208ENST00000537004 GPR12P47775 334 aa9.75□□□□□ -0.85
CLIP1-208ENST00000537004 C17orf58Q2M2W7 97 aa9.75□□□□□ -0.85
CLIP1-208ENST00000537004 ZNF66Q6ZN08 573 aa9.75□□□□□ -0.85
CLIP1-208ENST00000537004 C1orf87Q8N0U7 546 aa9.75□□□□□ -0.85
CLIP1-208ENST00000537004 SPAG16Q8N0X2 631 aa9.75□□□□□ -0.85
CLIP1-208ENST00000537004 FGFRL1Q8N441 504 aa9.75□□□□□ -0.85
CLIP1-208ENST00000537004 TCTEX1D1Q8N7M0 179 aa9.75□□□□□ -0.85
CLIP1-208ENST00000537004 OR1S2Q8NGQ3 325 aa9.75□□□□□ -0.85
CLIP1-208ENST00000537004 FAM216AQ8WUB2 273 aa9.75□□□□□ -0.85
CLIP1-208ENST00000537004 HSD17B10Q99714 261 aaKnown RBP9.75□□□□□ -0.85
CLIP1-208ENST00000537004 SLC25A31Q9H0C2 315 aa9.75□□□□□ -0.85
CLIP1-208ENST00000537004 ARV1Q9H2C2 271 aa9.75□□□□□ -0.85
CLIP1-208ENST00000537004 C7orf69Q9H7B7 122 aa9.75□□□□□ -0.85
CLIP1-208ENST00000537004 RAB9BQ9NP90 201 aa9.75□□□□□ -0.85
CLIP1-208ENST00000537004 PPIAL4AQ9Y536 164 aa9.75□□□□□ -0.85
CLIP1-208ENST00000537004 TRAV38-1A0A0B4J264 116 aa9.74□□□□□ -0.85
CLIP1-208ENST00000537004 KBTBD11-OT1A0A1B0GTJ5 212 aa9.74□□□□□ -0.85
CLIP1-208ENST00000537004 NKX6-3A6NJ46 265 aa9.74□□□□□ -0.85
CLIP1-208ENST00000537004 LINC00473A8K010 186 aa9.74□□□□□ -0.85
CLIP1-208ENST00000537004 LGALS8O00214 317 aa9.74□□□□□ -0.85
CLIP1-208ENST00000537004 TMPRSS2O15393 492 aa9.74□□□□□ -0.85
CLIP1-208ENST00000537004 NUPL2O15504 423 aaKnown RBP9.74□□□□□ -0.85
CLIP1-208ENST00000537004 H2AFB1P0C5Y9 115 aa9.74□□□□□ -0.85
CLIP1-208ENST00000537004 BRWD1-AS2P59051 145 aa9.74□□□□□ -0.85
CLIP1-208ENST00000537004 ZNF816Q0VGE8 651 aaPredicted RBP9.74□□□□□ -0.85
CLIP1-208ENST00000537004 TCF23Q7RTU1 214 aa9.74□□□□□ -0.85
CLIP1-208ENST00000537004 TMEM252Q8N6L7 170 aa9.74□□□□□ -0.85
CLIP1-208ENST00000537004 FAM212BQ9NTI7 297 aaPredicted RBP9.74□□□□□ -0.85
CLIP1-208ENST00000537004 TAS2R3Q9NYW6 316 aa9.74□□□□□ -0.85
CLIP1-208ENST00000537004 CLN8Q9UBY8 286 aa9.74□□□□□ -0.85
CLIP1-208ENST00000537004 MMP24Q9Y5R2 645 aa9.74□□□□□ -0.85
CLIP1-208ENST00000537004 TENM1Q9UKZ4 2725 aa9.74□□□□□ -0.85
CLIP1-208ENST00000537004 ZNF705EA8MWA4 302 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-208ENST00000537004 S1PR2O95136 353 aa9.73□□□□□ -0.85
CLIP1-208ENST00000537004 IGHV3-7P01780 117 aa9.73□□□□□ -0.85
CLIP1-208ENST00000537004 ZNF134P52741 427 aa9.73□□□□□ -0.85
CLIP1-208ENST00000537004 PAX9P55771 341 aa9.73□□□□□ -0.85
CLIP1-208ENST00000537004 C22orf15Q8WYQ4 148 aa9.73□□□□□ -0.85
CLIP1-208ENST00000537004 RAB40CQ96S21 281 aa9.73□□□□□ -0.85
CLIP1-208ENST00000537004 SAV1Q9H4B6 383 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-208ENST00000537004 FOXH1O75593 365 aa9.73□□□□□ -0.85
CLIP1-208ENST00000537004 KRASP01116 189 aa9.73□□□□□ -0.85
CLIP1-208ENST00000537004 G6PCP35575 357 aa9.73□□□□□ -0.85
CLIP1-208ENST00000537004 SULT1A2P50226 295 aa9.73□□□□□ -0.85
CLIP1-208ENST00000537004 LINC00205P59089 165 aa9.73□□□□□ -0.85
CLIP1-208ENST00000537004 CLINT1Q14677 625 aa9.73□□□□□ -0.85
CLIP1-208ENST00000537004 KRTAP24-1Q3LI83 254 aa9.73□□□□□ -0.85
CLIP1-208ENST00000537004 ODF3L1Q8IXM7 274 aa9.73□□□□□ -0.85
CLIP1-208ENST00000537004 SAT2Q96F10 170 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-208ENST00000537004 GINS3Q9BRX5 216 aa9.73□□□□□ -0.85
CLIP1-208ENST00000537004 SSBP3Q9BWW4 388 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-208ENST00000537004 IFI27L2Q9H2X8 130 aa9.73□□□□□ -0.85
CLIP1-208ENST00000537004 COA4Q9NYJ1 87 aa9.73□□□□□ -0.85
CLIP1-208ENST00000537004 SYNGR2O43760 224 aa9.72□□□□□ -0.85
CLIP1-208ENST00000537004 PROP1O75360 226 aa9.72□□□□□ -0.85
CLIP1-208ENST00000537004 CST7O76096 145 aa9.72□□□□□ -0.85
CLIP1-208ENST00000537004 ATG12O94817 140 aa9.72□□□□□ -0.85
CLIP1-208ENST00000537004 APOC3P02656 99 aa9.72□□□□□ -0.85
CLIP1-208ENST00000537004 P0C879 139 aa9.72□□□□□ -0.85
CLIP1-208ENST00000537004 NDUFB7P17568 137 aa9.72□□□□□ -0.85
CLIP1-208ENST00000537004 RPL23AP62750 156 aaKnown RBP9.72□□□□□ -0.85
CLIP1-208ENST00000537004 BAXQ07812 192 aa9.72□□□□□ -0.85
CLIP1-208ENST00000537004 UTF1Q5T230 341 aa9.72□□□□□ -0.85
CLIP1-208ENST00000537004 SMIM8Q96KF7 97 aa9.72□□□□□ -0.85
CLIP1-208ENST00000537004 GFOD1Q9NXC2 390 aa9.72□□□□□ -0.85
CLIP1-208ENST00000537004 PLA2G2EQ9NZK7 142 aa9.72□□□□□ -0.85
CLIP1-208ENST00000537004 CTSZQ9UBR2 303 aa9.72□□□□□ -0.85
CLIP1-208ENST00000537004 SLC25A10Q9UBX3 287 aaPredicted RBP9.72□□□□□ -0.85
CLIP1-208ENST00000537004 WSB1Q9Y6I7 421 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms