RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 OR4A5Q8NH83 315 aa13.02□□□□□ -0.33
VAMP1-205ENST00000535927 PIFOQ8TCI5 191 aa13.02□□□□□ -0.33
VAMP1-205ENST00000535927 ZNF431Q8TF32 576 aaPredicted RBP13.02□□□□□ -0.33
VAMP1-205ENST00000535927 MITD1Q8WV92 249 aa13.02□□□□□ -0.33
VAMP1-205ENST00000535927 RBPMSQ93062 196 aaKnown RBP13.02□□□□□ -0.33
VAMP1-205ENST00000535927 RBM14Q96PK6 669 aaKnown RBP13.02□□□□□ -0.33
VAMP1-205ENST00000535927 PHB2Q99623 299 aa13.02□□□□□ -0.33
VAMP1-205ENST00000535927 STAB1Q9NY15 2570 aa13.02□□□□□ -0.33
VAMP1-205ENST00000535927 A6NDX4 124 aa13.01□□□□□ -0.33
VAMP1-205ENST00000535927 CRYZL1O95825 349 aa13.01□□□□□ -0.33
VAMP1-205ENST00000535927 OR5AC1P0C628 307 aa13.01□□□□□ -0.33
VAMP1-205ENST00000535927 TMEM11P17152 192 aa13.01□□□□□ -0.33
VAMP1-205ENST00000535927 ANXA7P20073 488 aaKnown RBP13.01□□□□□ -0.33
VAMP1-205ENST00000535927 IL17RELQ6ZVW7 336 aa13.01□□□□□ -0.33
VAMP1-205ENST00000535927 ZNF695Q8IW36 515 aa13.01□□□□□ -0.33
VAMP1-205ENST00000535927 SIGLECL1Q8N7X8 197 aa13.01□□□□□ -0.33
VAMP1-205ENST00000535927 LSM10Q969L4 123 aaKnown RBP13.01□□□□□ -0.33
VAMP1-205ENST00000535927 TP53RKQ96S44 253 aa13.01□□□□□ -0.33
VAMP1-205ENST00000535927 KIAA1456Q9P272 454 aa13.01□□□□□ -0.33
VAMP1-205ENST00000535927 VPREB3Q9UKI3 123 aa13.01□□□□□ -0.33
VAMP1-205ENST00000535927 H3BUX3 64 aa13□□□□□ -0.33
VAMP1-205ENST00000535927 NDUFA3O95167 84 aa13□□□□□ -0.33
VAMP1-205ENST00000535927 IGKV1-16P04430 117 aa13□□□□□ -0.33
VAMP1-205ENST00000535927 VDAC1P21796 283 aa13□□□□□ -0.33
VAMP1-205ENST00000535927 HILS1P60008 231 aa13□□□□□ -0.33
VAMP1-205ENST00000535927 UBE2KP61086 200 aa13□□□□□ -0.33
VAMP1-205ENST00000535927 C22orf15Q8WYQ4 148 aa13□□□□□ -0.33
VAMP1-205ENST00000535927 RRNAD1Q96FB5 475 aaKnown RBP13□□□□□ -0.33
VAMP1-205ENST00000535927 RHOVQ96L33 236 aa13□□□□□ -0.33
VAMP1-205ENST00000535927 HARBI1Q96MB7 349 aa13□□□□□ -0.33
VAMP1-205ENST00000535927 ZNF48Q96MX3 618 aaPredicted RBP13□□□□□ -0.33
VAMP1-205ENST00000535927 BET1LQ9NYM9 111 aa13□□□□□ -0.33
VAMP1-205ENST00000535927 TMED3Q9Y3Q3 217 aa13□□□□□ -0.33
VAMP1-205ENST00000535927 IGHV3-72A0A0B4J1Y9 119 aa12.99□□□□□ -0.33
VAMP1-205ENST00000535927 C7orf66A4D0T2 115 aa12.99□□□□□ -0.33
VAMP1-205ENST00000535927 NBR2O15453 112 aa12.99□□□□□ -0.33
VAMP1-205ENST00000535927 VSIG10L2P0DP72 767 aa12.99□□□□□ -0.33
VAMP1-205ENST00000535927 SLC25A6P12236 298 aa12.99□□□□□ -0.33
VAMP1-205ENST00000535927 R3HDM4Q96D70 268 aa12.99□□□□□ -0.33
VAMP1-205ENST00000535927 MDFIQ99750 246 aa12.99□□□□□ -0.33
VAMP1-205ENST00000535927 FKBP11Q9NYL4 201 aa12.99□□□□□ -0.33
VAMP1-205ENST00000535927 MOB4Q9Y3A3 225 aa12.99□□□□□ -0.33
VAMP1-205ENST00000535927 MARCH11A6NNE9 402 aa12.98□□□□□ -0.33
VAMP1-205ENST00000535927 RRHO14718 337 aa12.98□□□□□ -0.33
VAMP1-205ENST00000535927 RAMP3O60896 148 aa12.98□□□□□ -0.33
VAMP1-205ENST00000535927 OR2A4O95047 310 aa12.98□□□□□ -0.33
VAMP1-205ENST00000535927 IFNA21P01568 189 aa12.98□□□□□ -0.33
VAMP1-205ENST00000535927 MAS1LP35410 378 aa12.98□□□□□ -0.33
VAMP1-205ENST00000535927 LINC00205P59089 165 aa12.98□□□□□ -0.33
VAMP1-205ENST00000535927 SP6Q3SY56 376 aa12.98□□□□□ -0.33
VAMP1-205ENST00000535927 SELENOHQ8IZQ5 122 aaKnown RBP12.98□□□□□ -0.33
VAMP1-205ENST00000535927 C12orf45Q8N5I9 185 aaPredicted RBP12.98□□□□□ -0.33
VAMP1-205ENST00000535927 SEC22AQ96IW7 307 aa12.98□□□□□ -0.33
VAMP1-205ENST00000535927 OR2A7Q96R45 310 aa12.98□□□□□ -0.33
VAMP1-205ENST00000535927 GPHA2Q96T91 129 aa12.98□□□□□ -0.33
VAMP1-205ENST00000535927 MMP24Q9Y5R2 645 aa12.98□□□□□ -0.33
VAMP1-205ENST00000535927 HOXA3O43365 443 aaPredicted RBP12.97□□□□□ -0.33
VAMP1-205ENST00000535927 IL6RP08887 468 aaPredicted RBP12.97□□□□□ -0.33
VAMP1-205ENST00000535927 SPNP16150 400 aa12.97□□□□□ -0.33
VAMP1-205ENST00000535927 HLA-GP17693 338 aa12.97□□□□□ -0.33
VAMP1-205ENST00000535927 PSG5Q15238 335 aa12.97□□□□□ -0.33
VAMP1-205ENST00000535927 MMDQ15546 238 aa12.97□□□□□ -0.33
VAMP1-205ENST00000535927 SLC9A3R2Q15599 337 aa12.97□□□□□ -0.33
VAMP1-205ENST00000535927 TATDN3Q17R31 274 aa12.97□□□□□ -0.33
VAMP1-205ENST00000535927 OR2B11Q5JQS5 317 aa12.97□□□□□ -0.33
VAMP1-205ENST00000535927 H2BFWTQ7Z2G1 175 aa12.97□□□□□ -0.33
VAMP1-205ENST00000535927 PUSL1Q8N0Z8 303 aaKnown RBP12.97□□□□□ -0.33
VAMP1-205ENST00000535927 DMBX1Q8NFW5 382 aa12.97□□□□□ -0.33
VAMP1-205ENST00000535927 CASTOR1Q8WTX7 329 aa12.97□□□□□ -0.33
VAMP1-205ENST00000535927 SLC25A33Q9BSK2 321 aa12.97□□□□□ -0.33
VAMP1-205ENST00000535927 PLSCR3Q9NRY6 295 aa12.97□□□□□ -0.33
VAMP1-205ENST00000535927 COA4Q9NYJ1 87 aa12.97□□□□□ -0.33
VAMP1-205ENST00000535927 SOX21Q9Y651 276 aaPredicted RBP12.97□□□□□ -0.33
VAMP1-205ENST00000535927 DBX1A6NMT0 343 aa12.96□□□□□ -0.33
VAMP1-205ENST00000535927 TCF21O43680 179 aa12.96□□□□□ -0.33
VAMP1-205ENST00000535927 SNAPC5O75971 98 aa12.96□□□□□ -0.33
VAMP1-205ENST00000535927 S1PR2O95136 353 aa12.96□□□□□ -0.33
VAMP1-205ENST00000535927 KRASP01116 189 aa12.96□□□□□ -0.33
VAMP1-205ENST00000535927 IGLV2-23P01705 113 aa12.96□□□□□ -0.33
VAMP1-205ENST00000535927 IGHV4-59P01825 116 aa12.96□□□□□ -0.33
VAMP1-205ENST00000535927 CRYGBP07316 175 aa12.96□□□□□ -0.33
VAMP1-205ENST00000535927 AKR1C2P52895 323 aa12.96□□□□□ -0.33
VAMP1-205ENST00000535927 C5orf64Q2M2E5 130 aa12.96□□□□□ -0.33
VAMP1-205ENST00000535927 TMEM268Q5VZI3 342 aa12.96□□□□□ -0.33
VAMP1-205ENST00000535927 PPP1R27Q86WC6 154 aa12.96□□□□□ -0.33
VAMP1-205ENST00000535927 PRIMA1Q86XR5 153 aa12.96□□□□□ -0.33
VAMP1-205ENST00000535927 MMD2Q8IY49 270 aa12.96□□□□□ -0.33
VAMP1-205ENST00000535927 SPATA3Q8NHX4 192 aa12.96□□□□□ -0.33
VAMP1-205ENST00000535927 TMEM167AQ8TBQ9 72 aa12.96□□□□□ -0.33
VAMP1-205ENST00000535927 SPIN2AQ99865 258 aa12.96□□□□□ -0.33
VAMP1-205ENST00000535927 RASL11BQ9BPW5 248 aa12.96□□□□□ -0.33
VAMP1-205ENST00000535927 SPIN2BQ9BPZ2 258 aa12.96□□□□□ -0.33
VAMP1-205ENST00000535927 RANBP3Q9H6Z4 567 aaPredicted RBP12.96□□□□□ -0.33
VAMP1-205ENST00000535927 SIGLEC9Q9Y336 463 aa12.96□□□□□ -0.33
VAMP1-205ENST00000535927 A0A1B0GU03 582 aa12.95□□□□□ -0.34
VAMP1-205ENST00000535927 MDFIC2A0A1B0GVS7 189 aa12.95□□□□□ -0.34
VAMP1-205ENST00000535927 NCBP2LA6PVI3 153 aaKnown RBP12.95□□□□□ -0.34
VAMP1-205ENST00000535927 SRRM4A7MD48 611 aaKnown RBP12.95□□□□□ -0.34
VAMP1-205ENST00000535927 TRIM77I1YAP6 450 aa12.95□□□□□ -0.34
VAMP1-205ENST00000535927 RNASE1P07998 156 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms