RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 PNKDQ8N490 385 aa10.82□□□□□ -0.68
SPG11-203ENST00000535302 LEPROTL1O95214 131 aa10.82□□□□□ -0.68
SPG11-203ENST00000535302 FAM201AQ5SY85 155 aa10.82□□□□□ -0.68
SPG11-203ENST00000535302 DMRTA1Q5VZB9 504 aa10.82□□□□□ -0.68
SPG11-203ENST00000535302 PPIAL4CA0A0B4J2A2 164 aa10.81□□□□□ -0.68
SPG11-203ENST00000535302 PRR33A8MZF0 331 aa10.81□□□□□ -0.68
SPG11-203ENST00000535302 PPIAL4GP0DN37 164 aa10.81□□□□□ -0.68
SPG11-203ENST00000535302 HKR1P10072 659 aa10.81□□□□□ -0.68
SPG11-203ENST00000535302 FGF12P61328 243 aa10.81□□□□□ -0.68
SPG11-203ENST00000535302 LAMTOR1Q6IAA8 161 aa10.81□□□□□ -0.68
SPG11-203ENST00000535302 LHFPL6Q9Y693 200 aa10.81□□□□□ -0.68
SPG11-203ENST00000535302 TDRD15B5MCY1 1934 aaKnown RBP10.81□□□□□ -0.68
SPG11-203ENST00000535302 TRBV20OR9-2A0A075B6H5 130 aa10.81□□□□□ -0.68
SPG11-203ENST00000535302 ZG16O60844 167 aa10.81□□□□□ -0.68
SPG11-203ENST00000535302 MPV17P39210 176 aa10.81□□□□□ -0.68
SPG11-203ENST00000535302 ZP4Q12836 540 aa10.81□□□□□ -0.68
SPG11-203ENST00000535302 TP53BP1Q12888 1972 aaPredicted RBP10.81□□□□□ -0.68
SPG11-203ENST00000535302 LAMB2P55268 1798 aa10.81□□□□□ -0.68
SPG11-203ENST00000535302 IGHV3-64A0A075B6Q5 118 aa10.81□□□□□ -0.68
SPG11-203ENST00000535302 DUX3Q96PT4 197 aa10.81□□□□□ -0.68
SPG11-203ENST00000535302 GLIPR1P48060 266 aa10.81□□□□□ -0.68
SPG11-203ENST00000535302 LOC105371242A0A075B767 164 aa10.81□□□□□ -0.68
SPG11-203ENST00000535302 GREM1O60565 184 aa10.81□□□□□ -0.68
SPG11-203ENST00000535302 APOMO95445 188 aa10.81□□□□□ -0.68
SPG11-203ENST00000535302 ERGP11308 486 aa10.81□□□□□ -0.68
SPG11-203ENST00000535302 LIMS1P48059 325 aa10.81□□□□□ -0.68
SPG11-203ENST00000535302 KLF14Q8TD94 323 aaPredicted RBP10.81□□□□□ -0.68
SPG11-203ENST00000535302 KCNK17Q96T54 332 aa10.81□□□□□ -0.68
SPG11-203ENST00000535302 STRCP1A6NGW2 1772 aa10.81□□□□□ -0.68
SPG11-203ENST00000535302 A8MWL6 223 aa10.8□□□□□ -0.68
SPG11-203ENST00000535302 PRR31Q5SQ13 230 aa10.8□□□□□ -0.68
SPG11-203ENST00000535302 C10orf126Q8N4M7 172 aa10.8□□□□□ -0.68
SPG11-203ENST00000535302 GCM2O75603 506 aaPredicted RBP10.8□□□□□ -0.68
SPG11-203ENST00000535302 WISP3O95389 354 aaPredicted RBP10.8□□□□□ -0.68
SPG11-203ENST00000535302 RFPL3SP0C7P2 107 aa10.8□□□□□ -0.68
SPG11-203ENST00000535302 FOXA3P55318 350 aaPredicted RBP10.8□□□□□ -0.68
SPG11-203ENST00000535302 CBLN4Q9NTU7 201 aa10.8□□□□□ -0.68
SPG11-203ENST00000535302 H0YL77 283 aa10.8□□□□□ -0.68
SPG11-203ENST00000535302 C3orf36Q3SXR2 165 aa10.8□□□□□ -0.68
SPG11-203ENST00000535302 FAM159AQ6UWV7 190 aa10.8□□□□□ -0.68
SPG11-203ENST00000535302 MRPL16Q9NX20 251 aaKnown RBP10.8□□□□□ -0.68
SPG11-203ENST00000535302 EIF4EBP2Q13542 120 aaPredicted RBP10.8□□□□□ -0.68
SPG11-203ENST00000535302 ACSF3Q4G176 576 aaPredicted RBP10.8□□□□□ -0.68
SPG11-203ENST00000535302 F5P12259 2224 aa10.8□□□□□ -0.68
SPG11-203ENST00000535302 MGST3O14880 152 aa10.8□□□□□ -0.68
SPG11-203ENST00000535302 PGLYRP1O75594 196 aaPredicted RBP10.8□□□□□ -0.68
SPG11-203ENST00000535302 HOXA6P31267 233 aa10.8□□□□□ -0.68
SPG11-203ENST00000535302 SLC25A47Q6Q0C1 308 aa10.8□□□□□ -0.68
SPG11-203ENST00000535302 C14orf144Q96I85 54 aa10.8□□□□□ -0.68
SPG11-203ENST00000535302 SIGLEC12Q96PQ1 595 aa10.8□□□□□ -0.68
SPG11-203ENST00000535302 A0A1W2PS18 150 aa10.8□□□□□ -0.68
SPG11-203ENST00000535302 IGHV3-11P01762 117 aa10.8□□□□□ -0.68
SPG11-203ENST00000535302 CTSSP25774 331 aa10.8□□□□□ -0.68
SPG11-203ENST00000535302 CD69Q07108 199 aa10.8□□□□□ -0.68
SPG11-203ENST00000535302 PCOLCEQ15113 449 aa10.8□□□□□ -0.68
SPG11-203ENST00000535302 NFAM1Q8NET5 270 aaPredicted RBP10.8□□□□□ -0.68
SPG11-203ENST00000535302 FDCSPQ8NFU4 85 aa10.8□□□□□ -0.68
SPG11-203ENST00000535302 SCNM1Q9BWG6 230 aa10.8□□□□□ -0.68
SPG11-203ENST00000535302 RPL8P62917 257 aaKnown RBP10.79□□□□□ -0.68
SPG11-203ENST00000535302 PDCD11Q14690 1871 aaKnown RBP10.79□□□□□ -0.68
SPG11-203ENST00000535302 CD24P25063 80 aa10.79□□□□□ -0.68
SPG11-203ENST00000535302 IFITM3Q01628 133 aa10.79□□□□□ -0.68
SPG11-203ENST00000535302 NSUN5P1Q3KNT7 163 aa10.79□□□□□ -0.68
SPG11-203ENST00000535302 FAM106AQ4KMX7 169 aa10.79□□□□□ -0.68
SPG11-203ENST00000535302 DDA1Q9BW61 102 aa10.79□□□□□ -0.68
SPG11-203ENST00000535302 S1PR2O95136 353 aa10.79□□□□□ -0.68
SPG11-203ENST00000535302 FGF5P12034 268 aa10.79□□□□□ -0.68
SPG11-203ENST00000535302 MFAP4P55083 255 aa10.79□□□□□ -0.68
SPG11-203ENST00000535302 QTRT1Q9BXR0 403 aaKnown RBP10.79□□□□□ -0.68
SPG11-203ENST00000535302 IDI2-AS1Q9NZ38 188 aa10.79□□□□□ -0.68
SPG11-203ENST00000535302 TRAV21A0A0B4J279 112 aa10.79□□□□□ -0.68
SPG11-203ENST00000535302 GPR146Q96CH1 333 aa10.79□□□□□ -0.68
SPG11-203ENST00000535302 TNFSF18Q9UNG2 199 aa10.79□□□□□ -0.68
SPG11-203ENST00000535302 DLEC1Q9Y238 1755 aa10.79□□□□□ -0.68
SPG11-203ENST00000535302 CDX1P47902 265 aaPredicted RBP10.79□□□□□ -0.68
SPG11-203ENST00000535302 RIPPLY3P57055 190 aa10.79□□□□□ -0.68
SPG11-203ENST00000535302 DLL3Q9NYJ7 618 aa10.79□□□□□ -0.68
SPG11-203ENST00000535302 CEACAM4O75871 244 aa10.79□□□□□ -0.68
SPG11-203ENST00000535302 TRGV3P03979 118 aa10.79□□□□□ -0.68
SPG11-203ENST00000535302 STARD6P59095 220 aa10.79□□□□□ -0.68
SPG11-203ENST00000535302 IGLV1-36A0A0B4J1U3 117 aa10.78□□□□□ -0.68
SPG11-203ENST00000535302 RAMP1O60894 148 aa10.78□□□□□ -0.68
SPG11-203ENST00000535302 CHD5Q8TDI0 1954 aa10.78□□□□□ -0.68
SPG11-203ENST00000535302 ARFGEF1Q9Y6D6 1849 aa10.78□□□□□ -0.68
SPG11-203ENST00000535302 RALGAPA1Q6GYQ0 2036 aa10.78□□□□□ -0.68
SPG11-203ENST00000535302 M0QZK8 103 aa10.78□□□□□ -0.68
SPG11-203ENST00000535302 DLL1O00548 723 aa10.78□□□□□ -0.68
SPG11-203ENST00000535302 GGCTO75223 188 aaKnown RBP10.78□□□□□ -0.68
SPG11-203ENST00000535302 PDLIM4P50479 330 aa10.78□□□□□ -0.68
SPG11-203ENST00000535302 SPSB4Q96A44 273 aa10.78□□□□□ -0.68
SPG11-203ENST00000535302 COL11A2P13942 1736 aaPredicted RBP10.78□□□□□ -0.68
SPG11-203ENST00000535302 QSER1Q2KHR3 1735 aa10.78□□□□□ -0.68
SPG11-203ENST00000535302 UBR3Q6ZT12 1888 aa10.78□□□□□ -0.68
SPG11-203ENST00000535302 CD1AP06126 327 aa10.78□□□□□ -0.68
SPG11-203ENST00000535302 KIR3DL3Q8N743 410 aa10.78□□□□□ -0.68
SPG11-203ENST00000535302 ZNRF1Q8ND25 227 aa10.78□□□□□ -0.68
SPG11-203ENST00000535302 KCNS1Q96KK3 526 aa10.78□□□□□ -0.68
SPG11-203ENST00000535302 A0A0G2JMM0 328 aa10.78□□□□□ -0.68
SPG11-203ENST00000535302 A0A1W2PPB8 328 aa10.78□□□□□ -0.68
SPG11-203ENST00000535302 A0A1W2PRS3 328 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms