RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 NRIP2Q9BQI9 281 aa15.51■□□□□ 0.07
SFSWAP-203ENST00000535236 PPP1R3EQ9H7J1 279 aa15.51■□□□□ 0.07
SFSWAP-203ENST00000535236 MRPS16Q9Y3D3 137 aaKnown RBP15.51■□□□□ 0.07
SFSWAP-203ENST00000535236 LCN2P80188 198 aa15.51■□□□□ 0.07
SFSWAP-203ENST00000535236 SMUG1Q53HV7 270 aa15.51■□□□□ 0.07
SFSWAP-203ENST00000535236 OR5P3Q8WZ94 311 aa15.51■□□□□ 0.07
SFSWAP-203ENST00000535236 NEU1Q99519 415 aa15.51■□□□□ 0.07
SFSWAP-203ENST00000535236 TMEM106BQ9NUM4 274 aa15.51■□□□□ 0.07
SFSWAP-203ENST00000535236 FBLL1A6NHQ2 334 aaKnown RBP15.5■□□□□ 0.07
SFSWAP-203ENST00000535236 TIAF1O95411 115 aa15.5■□□□□ 0.07
SFSWAP-203ENST00000535236 NPBWR2P48146 333 aa15.5■□□□□ 0.07
SFSWAP-203ENST00000535236 NPIPB3Q92617 1050 aa15.5■□□□□ 0.07
SFSWAP-203ENST00000535236 KIR2DL4Q99706 377 aa15.5■□□□□ 0.07
SFSWAP-203ENST00000535236 GDF15Q99988 308 aa15.5■□□□□ 0.07
SFSWAP-203ENST00000535236 C19orf24Q9BVV8 132 aa15.5■□□□□ 0.07
SFSWAP-203ENST00000535236 SSBP3Q9BWW4 388 aaPredicted RBP15.5■□□□□ 0.07
SFSWAP-203ENST00000535236 KCNE5Q9UJ90 142 aa15.5■□□□□ 0.07
SFSWAP-203ENST00000535236 TCF24Q7RTU0 167 aa15.5■□□□□ 0.07
SFSWAP-203ENST00000535236 MRAP2Q96G30 205 aa15.5■□□□□ 0.07
SFSWAP-203ENST00000535236 MRPL32Q9BYC8 188 aaKnown RBP15.5■□□□□ 0.07
SFSWAP-203ENST00000535236 GPR61Q9BZJ8 451 aa15.5■□□□□ 0.07
SFSWAP-203ENST00000535236 G6PC2Q9NQR9 355 aa15.5■□□□□ 0.07
SFSWAP-203ENST00000535236 LEPROTL1O95214 131 aa15.5■□□□□ 0.07
SFSWAP-203ENST00000535236 F12P00748 615 aaPredicted RBP15.5■□□□□ 0.07
SFSWAP-203ENST00000535236 IGHMP01871 453 aa15.5■□□□□ 0.07
SFSWAP-203ENST00000535236 CXCL2P19875 107 aa15.5■□□□□ 0.07
SFSWAP-203ENST00000535236 GLRXP35754 106 aa15.5■□□□□ 0.07
SFSWAP-203ENST00000535236 LINC00470Q9BZP3 86 aa15.5■□□□□ 0.07
SFSWAP-203ENST00000535236 MCM3APO60318 1980 aa15.5■□□□□ 0.07
SFSWAP-203ENST00000535236 C1QL1O75973 258 aa15.49■□□□□ 0.07
SFSWAP-203ENST00000535236 FAM27E3Q08E93 113 aa15.49■□□□□ 0.07
SFSWAP-203ENST00000535236 MBNL2Q5VZF2 373 aaKnown RBP15.49■□□□□ 0.07
SFSWAP-203ENST00000535236 SPSB4Q96A44 273 aa15.49■□□□□ 0.07
SFSWAP-203ENST00000535236 MEGF10Q96KG7 1140 aa15.49■□□□□ 0.07
SFSWAP-203ENST00000535236 NEU4Q8WWR8 484 aaPredicted RBP15.49■□□□□ 0.07
SFSWAP-203ENST00000535236 KLK15Q9H2R5 256 aa15.49■□□□□ 0.07
SFSWAP-203ENST00000535236 C10orf128Q5T292 105 aa15.49■□□□□ 0.07
SFSWAP-203ENST00000535236 QSER1Q2KHR3 1735 aa15.49■□□□□ 0.07
SFSWAP-203ENST00000535236 CRYBB3P26998 211 aa15.49■□□□□ 0.07
SFSWAP-203ENST00000535236 CRYBA2P53672 197 aa15.49■□□□□ 0.07
SFSWAP-203ENST00000535236 ZNF818PQ6ZRF7 136 aa15.49■□□□□ 0.07
SFSWAP-203ENST00000535236 ZNRF1Q8ND25 227 aa15.49■□□□□ 0.07
SFSWAP-203ENST00000535236 HIST1H4GQ99525 98 aa15.49■□□□□ 0.07
SFSWAP-203ENST00000535236 FOXI3A8MTJ6 420 aaPredicted RBP15.49■□□□□ 0.07
SFSWAP-203ENST00000535236 MRPL18Q9H0U6 180 aaKnown RBP15.48■□□□□ 0.07
SFSWAP-203ENST00000535236 GP6Q9HCN6 339 aa15.48■□□□□ 0.07
SFSWAP-203ENST00000535236 LTBP4Q8N2S1 1624 aa15.48■□□□□ 0.07
SFSWAP-203ENST00000535236 IGKV1D-42A0A075B6H8 117 aa15.48■□□□□ 0.07
SFSWAP-203ENST00000535236 CEACAM4O75871 244 aa15.48■□□□□ 0.07
SFSWAP-203ENST00000535236 IGLV3-21P80748 117 aaPredicted RBP15.48■□□□□ 0.07
SFSWAP-203ENST00000535236 GOLT1AQ6ZVE7 132 aa15.48■□□□□ 0.07
SFSWAP-203ENST00000535236 SIGLEC12Q96PQ1 595 aa15.48■□□□□ 0.07
SFSWAP-203ENST00000535236 NABP2Q9BQ15 211 aa15.48■□□□□ 0.07
SFSWAP-203ENST00000535236 IGHV3OR16-13A0A075B7E8 117 aa15.48■□□□□ 0.07
SFSWAP-203ENST00000535236 IGHV3-74A0A0B4J1X5 117 aa15.48■□□□□ 0.07
SFSWAP-203ENST00000535236 IGHV3-48P01763 117 aa15.48■□□□□ 0.07
SFSWAP-203ENST00000535236 FAM168AQ92567 244 aa15.48■□□□□ 0.07
SFSWAP-203ENST00000535236 ZNF703Q9H7S9 590 aaPredicted RBP15.48■□□□□ 0.07
SFSWAP-203ENST00000535236 CTHRC1Q96CG8 243 aa15.48■□□□□ 0.07
SFSWAP-203ENST00000535236 TMEM70Q9BUB7 260 aa15.48■□□□□ 0.07
SFSWAP-203ENST00000535236 MOSP00540 346 aa15.47■□□□□ 0.07
SFSWAP-203ENST00000535236 CEACAM1P13688 526 aa15.47■□□□□ 0.07
SFSWAP-203ENST00000535236 KLK2P20151 261 aa15.47■□□□□ 0.07
SFSWAP-203ENST00000535236 PAPPA-AS1Q5QFB9 102 aa15.47■□□□□ 0.07
SFSWAP-203ENST00000535236 DRAM1Q8N682 238 aa15.47■□□□□ 0.07
SFSWAP-203ENST00000535236 SCARF2Q96GP6 870 aaPredicted RBP15.47■□□□□ 0.07
SFSWAP-203ENST00000535236 RPS11P62280 158 aaKnown RBP eCLIP15.47■□□□□ 0.07
SFSWAP-203ENST00000535236 SMIM8Q96KF7 97 aa15.47■□□□□ 0.07
SFSWAP-203ENST00000535236 SGK494Q96LW2 274 aa15.47■□□□□ 0.07
SFSWAP-203ENST00000535236 ZNF883P0CG24 379 aa15.47■□□□□ 0.07
SFSWAP-203ENST00000535236 ERASQ7Z444 233 aa15.47■□□□□ 0.07
SFSWAP-203ENST00000535236 C9JCJ5 164 aa15.47■□□□□ 0.07
SFSWAP-203ENST00000535236 IGHV3-23P01764 117 aa15.47■□□□□ 0.07
SFSWAP-203ENST00000535236 OR4X2Q8NGF9 303 aa15.47■□□□□ 0.07
SFSWAP-203ENST00000535236 WFDC6Q9BQY6 131 aa15.47■□□□□ 0.07
SFSWAP-203ENST00000535236 DPM3Q9P2X0 92 aa15.46■□□□□ 0.07
SFSWAP-203ENST00000535236 RFPL3SP0C7P2 107 aa15.46■□□□□ 0.07
SFSWAP-203ENST00000535236 SUMO2P61956 95 aaKnown RBP15.46■□□□□ 0.07
SFSWAP-203ENST00000535236 SPATA45Q537H7 98 aa15.46■□□□□ 0.07
SFSWAP-203ENST00000535236 NUP214P35658 2090 aaPredicted RBP15.46■□□□□ 0.07
SFSWAP-203ENST00000535236 LOC390937A0A1W2PQ73 354 aa15.46■□□□□ 0.07
SFSWAP-203ENST00000535236 SLC25A38Q96DW6 304 aa15.46■□□□□ 0.07
SFSWAP-203ENST00000535236 ABHD17AQ96GS6 310 aa15.46■□□□□ 0.07
SFSWAP-203ENST00000535236 TMEM101Q96IK0 257 aa15.46■□□□□ 0.07
SFSWAP-203ENST00000535236 A0A0G2JLM5 398 aa15.46■□□□□ 0.07
SFSWAP-203ENST00000535236 RPL39P5Q59GN2 51 aa15.46■□□□□ 0.07
SFSWAP-203ENST00000535236 ATP5IP56385 69 aaPredicted RBP15.46■□□□□ 0.06
SFSWAP-203ENST00000535236 SAPCD1Q5SSQ6 148 aa15.46■□□□□ 0.06
SFSWAP-203ENST00000535236 ITLN2Q8WWU7 325 aaPredicted RBP15.46■□□□□ 0.06
SFSWAP-203ENST00000535236 FABP2P12104 132 aa15.45■□□□□ 0.06
SFSWAP-203ENST00000535236 PMCHL1Q16048 86 aa15.45■□□□□ 0.06
SFSWAP-203ENST00000535236 CLDND2Q8NHS1 167 aa15.45■□□□□ 0.06
SFSWAP-203ENST00000535236 PSMB11A5LHX3 300 aa15.45■□□□□ 0.06
SFSWAP-203ENST00000535236 LINC00305Q7Z4B0 112 aa15.45■□□□□ 0.06
SFSWAP-203ENST00000535236 FAM57AQ8TBR7 257 aa15.45■□□□□ 0.06
SFSWAP-203ENST00000535236 YAE1D1Q9NRH1 226 aa15.45■□□□□ 0.06
SFSWAP-203ENST00000535236 KLF4O43474 513 aa15.45■□□□□ 0.06
SFSWAP-203ENST00000535236 CELA3AP09093 270 aa15.45■□□□□ 0.06
SFSWAP-203ENST00000535236 COTL1Q14019 142 aa15.45■□□□□ 0.06
SFSWAP-203ENST00000535236 CECR9P0C854 216 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms