RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 EDDM3BP56851 147 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 EDDM3AQ14507 147 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 C9orf152Q5JTZ5 239 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 Q6ZS49 121 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 SSX9Q7RTT3 188 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 FOXRED2Q8IWF2 684 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 LGI3Q8N145 548 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 LY6G5BQ8NDX9 201 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 WFDC11Q8NEX6 87 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 HDHD3Q9BSH5 251 aaPredicted RBP10.12□□□□□ -0.79
SCARB1-204ENST00000535005 PRDM13Q9H4Q3 707 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 TMEM242Q9NWH2 141 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 PRR13Q9NZ81 148 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 OR6C3Q9NZP0 311 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 ITPR3Q14573 2671 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 MYO9AB2RTY4 2548 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 hADV38S2A0JD32 116 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 IFITM10A6NMD0 228 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 H3BQ15 152 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 HSPA12AO43301 675 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 PITX3O75364 302 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 IL2RGP31785 369 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 CEACAM6P40199 344 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 NDUFA6P56556 154 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 TAS2R60P59551 318 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 RPL31P62899 125 aaKnown RBP10.12□□□□□ -0.79
SCARB1-204ENST00000535005 TMEM187Q14656 261 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 ZNF506Q5JVG8 444 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 Q6ZPA2 131 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 MOB1BQ7L9L4 216 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 GNPNAT1Q96EK6 184 aaPredicted RBP10.12□□□□□ -0.79
SCARB1-204ENST00000535005 TVP23CQ96ET8 276 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 C14orf144Q96I85 54 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 C18orf12Q96KH6 178 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 C20orf24Q9BUV8 137 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 SMIM3Q9BZL3 60 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 Q9N2K0 584 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 RPUSD1Q9UJJ7 312 aaKnown RBP10.12□□□□□ -0.79
SCARB1-204ENST00000535005 FBXO7Q9Y3I1 522 aa10.12□□□□□ -0.79
SCARB1-204ENST00000535005 LOC105371242A0A075B767 164 aa10.11□□□□□ -0.79
SCARB1-204ENST00000535005 RNF223E7ERA6 249 aa10.11□□□□□ -0.79
SCARB1-204ENST00000535005 PHF1O43189 567 aaPredicted RBP10.11□□□□□ -0.79
SCARB1-204ENST00000535005 YIF1AO95070 293 aa10.11□□□□□ -0.79
SCARB1-204ENST00000535005 CDS2O95674 445 aa10.11□□□□□ -0.79
SCARB1-204ENST00000535005 CGB3P0DN86 165 aa10.11□□□□□ -0.79
SCARB1-204ENST00000535005 CGB7P0DN87 165 aa10.11□□□□□ -0.79
SCARB1-204ENST00000535005 MMP9P14780 707 aa10.11□□□□□ -0.79
SCARB1-204ENST00000535005 GZMHP20718 246 aa10.11□□□□□ -0.79
SCARB1-204ENST00000535005 ZFP36P26651 326 aaKnown RBP10.11□□□□□ -0.79
SCARB1-204ENST00000535005 UCP3P55916 312 aa10.11□□□□□ -0.79
SCARB1-204ENST00000535005 UBE2KP61086 200 aa10.11□□□□□ -0.79
SCARB1-204ENST00000535005 PAX2Q02962 417 aa10.11□□□□□ -0.79
SCARB1-204ENST00000535005 PNRC1Q12796 327 aaPredicted RBP10.11□□□□□ -0.79
SCARB1-204ENST00000535005 GNMTQ14749 295 aa10.11□□□□□ -0.79
SCARB1-204ENST00000535005 ELOBQ15370 118 aa10.11□□□□□ -0.79
SCARB1-204ENST00000535005 ZNF674Q2M3X9 581 aa10.11□□□□□ -0.79
SCARB1-204ENST00000535005 TRAT1Q6PIZ9 186 aa10.11□□□□□ -0.79
SCARB1-204ENST00000535005 LIAT1Q6ZQX7 453 aa10.11□□□□□ -0.79
SCARB1-204ENST00000535005 HIST3H2BBQ8N257 126 aa10.11□□□□□ -0.79
SCARB1-204ENST00000535005 TPRX1Q8N7U7 411 aa10.11□□□□□ -0.79
SCARB1-204ENST00000535005 CCDC71LQ8N9Z2 235 aa10.11□□□□□ -0.79
SCARB1-204ENST00000535005 H1FXQ92522 213 aaKnown RBP10.11□□□□□ -0.79
SCARB1-204ENST00000535005 C2orf88Q9BSF0 95 aa10.11□□□□□ -0.79
SCARB1-204ENST00000535005 ZNF2Q9BSG1 426 aaPredicted RBP10.11□□□□□ -0.79
SCARB1-204ENST00000535005 WFDC1Q9HC57 220 aa10.11□□□□□ -0.79
SCARB1-204ENST00000535005 NECAP2Q9NVZ3 263 aa10.11□□□□□ -0.79
SCARB1-204ENST00000535005 TRAPPC2LQ9UL33 140 aa10.11□□□□□ -0.79
SCARB1-204ENST00000535005 UBE2J1Q9Y385 318 aaPredicted RBP10.11□□□□□ -0.79
SCARB1-204ENST00000535005 PUS1Q9Y606 427 aaKnown RBP eCLIP10.11□□□□□ -0.79
SCARB1-204ENST00000535005 LINC00312Q9Y6C7 94 aa10.11□□□□□ -0.79
SCARB1-204ENST00000535005 MED13LQ71F56 2210 aa10.11□□□□□ -0.79
SCARB1-204ENST00000535005 C22orf46C9J442 243 aa10.1□□□□□ -0.79
SCARB1-204ENST00000535005 SDCBPO00560 298 aaPredicted RBP10.1□□□□□ -0.79
SCARB1-204ENST00000535005 DDTP30046 118 aa10.1□□□□□ -0.79
SCARB1-204ENST00000535005 TAGLN2P37802 199 aaKnown RBP10.1□□□□□ -0.79
SCARB1-204ENST00000535005 TMEM200BQ69YZ2 307 aa10.1□□□□□ -0.79
SCARB1-204ENST00000535005 TCF23Q7RTU1 214 aa10.1□□□□□ -0.79
SCARB1-204ENST00000535005 FAM185AQ8N0U4 392 aa10.1□□□□□ -0.79
SCARB1-204ENST00000535005 OR13A1Q8NGR1 328 aa10.1□□□□□ -0.79
SCARB1-204ENST00000535005 FAM213BQ8TBF2 198 aa10.1□□□□□ -0.79
SCARB1-204ENST00000535005 RCC1LQ96I51 464 aaKnown RBP10.1□□□□□ -0.79
SCARB1-204ENST00000535005 SPIN2AQ99865 258 aa10.1□□□□□ -0.79
SCARB1-204ENST00000535005 SPIN2BQ9BPZ2 258 aa10.1□□□□□ -0.79
SCARB1-204ENST00000535005 NIPSNAP3BQ9BS92 247 aa10.1□□□□□ -0.79
SCARB1-204ENST00000535005 SLC25A31Q9H0C2 315 aa10.1□□□□□ -0.79
SCARB1-204ENST00000535005 LINC00574Q9H8X3 128 aa10.1□□□□□ -0.79
SCARB1-204ENST00000535005 ANXA10Q9UJ72 324 aa10.1□□□□□ -0.79
SCARB1-204ENST00000535005 CSMD1Q96PZ7 3565 aa10.1□□□□□ -0.79
SCARB1-204ENST00000535005 DOCK11Q5JSL3 2073 aa10.1□□□□□ -0.79
SCARB1-204ENST00000535005 TRGV10A0A0A0MS01 117 aa10.1□□□□□ -0.79
SCARB1-204ENST00000535005 PPIAL4CA0A0B4J2A2 164 aa10.1□□□□□ -0.79
SCARB1-204ENST00000535005 PIGBOS1A0A0B4J2F0 54 aa10.1□□□□□ -0.79
SCARB1-204ENST00000535005 HSD17B6O14756 317 aa10.1□□□□□ -0.79
SCARB1-204ENST00000535005 LIPFP07098 398 aa10.1□□□□□ -0.79
SCARB1-204ENST00000535005 SRP19P09132 144 aaKnown RBP10.1□□□□□ -0.79
SCARB1-204ENST00000535005 ZNF728P0DKX0 622 aa10.1□□□□□ -0.79
SCARB1-204ENST00000535005 OR13C7P0DN81 318 aa10.1□□□□□ -0.79
SCARB1-204ENST00000535005 ABCA11PQ4W5N1 156 aa10.1□□□□□ -0.79
SCARB1-204ENST00000535005 KHDC3LQ587J8 217 aa10.1□□□□□ -0.79
SCARB1-204ENST00000535005 NOL4LQ96MY1 436 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms