RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 IGHV1OR15-9A0A0B4J2B8 117 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 K7EP13 123 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 TIAF1O95411 115 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 TSPOP30536 169 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 CD69Q07108 199 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 SIGLEC14Q08ET2 396 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 HYAL1Q12794 435 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 ASCL5Q7RTU5 278 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 LRRC29Q8WV35 223 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 COPS9Q8WXC6 57 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 NABP1Q96AH0 204 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 OR8B2Q96RD0 313 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 DUSP15Q9H1R2 295 aaPredicted RBP3.42□□□□□ -1.86
SOX6-217ENST00000533870 SH3BGRL3Q9H299 93 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 NXT2Q9NPJ8 142 aaKnown RBP3.42□□□□□ -1.86
SOX6-217ENST00000533870 ZNF883P0CG24 379 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 GPR183P32249 361 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 OR1D5P58170 312 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 TBR1Q16650 682 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 SPATA12Q7Z6I5 190 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 IMMP1LQ96LU5 166 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 COL4A5P29400 1685 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 INS-IGF2F8WCM5 200 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 HRKO00198 91 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 OR2H2O95918 312 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 RPL8P62917 257 aaKnown RBP3.42□□□□□ -1.86
SOX6-217ENST00000533870 PRCDQ00LT1 54 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 Q56UQ5 140 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 OTPQ5XKR4 325 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 DNASE2BQ8WZ79 361 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 A0A1B0GUT8 65 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 TOMM40O96008 361 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 KIR2DL2P43627 348 aaPredicted RBP3.42□□□□□ -1.86
SOX6-217ENST00000533870 RPL15P61313 204 aaKnown RBP3.42□□□□□ -1.86
SOX6-217ENST00000533870 SNAI3Q3KNW1 292 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 RND1Q92730 232 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 FBXO17Q96EF6 278 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 FMC1Q96HJ9 113 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 TMEM140Q9NV12 185 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 MYH14Q7Z406 1995 aaKnown RBP3.42□□□□□ -1.86
SOX6-217ENST00000533870 IGHV2-70DA0A0C4DH43 119 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.42□□□□□ -1.86
SOX6-217ENST00000533870 HINT1P49773 126 aaPredicted RBP3.42□□□□□ -1.86
SOX6-217ENST00000533870 C3AR1Q16581 482 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 PIGYQ3MUY2 71 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 CENPWQ5EE01 88 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 OR8I2Q8N0Y5 310 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 STPG3Q8N7X2 389 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 DMRTA2Q96SC8 542 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 ELOVL1Q9BW60 279 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 PLSCR4Q9NRQ2 329 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 KIF13AQ9H1H9 1805 aa3.42□□□□□ -1.86
SOX6-217ENST00000533870 ZNF646O15015 1829 aaPredicted RBP3.42□□□□□ -1.86
SOX6-217ENST00000533870 TRAV38-1A0A0B4J264 116 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 A0A1W2PPE3 182 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 TGFBR3LH3BV60 316 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 LAMTOR5O43504 91 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 CA2P00918 260 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 CASP6P55212 293 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 SPEM2Q0P670 501 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 CCDC144NLQ6NUI1 221 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 SPRED2Q7Z698 418 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 FLYWCH2Q96CP2 140 aaKnown RBP3.41□□□□□ -1.86
SOX6-217ENST00000533870 ABHD14AQ9BUJ0 271 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 RPP21Q9H633 154 aaKnown RBP3.41□□□□□ -1.86
SOX6-217ENST00000533870 ZNF835Q9Y2P0 537 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 COX11Q9Y6N1 276 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 K7EQS6 105 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 TMEM50AO95807 157 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 SCTP09683 121 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 C3orf79P0CE67 100 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 OTX2P32243 289 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 RPL27AP46776 148 aaKnown RBP3.41□□□□□ -1.86
SOX6-217ENST00000533870 ARL16Q0P5N6 197 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 MIC13Q5XKP0 118 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 YRDCQ86U90 279 aaKnown RBP3.41□□□□□ -1.86
SOX6-217ENST00000533870 TIMD4Q96H15 378 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 SRSF8Q9BRL6 282 aaKnown RBP3.41□□□□□ -1.86
SOX6-217ENST00000533870 HDHD3Q9BSH5 251 aaPredicted RBP3.41□□□□□ -1.86
SOX6-217ENST00000533870 PNRC2Q9NPJ4 139 aaKnown RBP3.41□□□□□ -1.86
SOX6-217ENST00000533870 CHCHD2Q9Y6H1 151 aaPredicted RBP3.41□□□□□ -1.86
SOX6-217ENST00000533870 STRCP1A6NGW2 1772 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 CNTRLQ7Z7A1 2325 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 IGHV3-20A0A0C4DH32 117 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 IGKV1-5P01602 117 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 COX6CP09669 75 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 APOBEC3AP31941 199 aaPredicted RBP3.41□□□□□ -1.86
SOX6-217ENST00000533870 RPL13AP40429 203 aaKnown RBP3.41□□□□□ -1.86
SOX6-217ENST00000533870 PCOLCEQ15113 449 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 TREML4Q6UXN2 200 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 C1QL2Q7Z5L3 287 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 OR2T6Q8NHC8 308 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 H1FXQ92522 213 aaKnown RBP3.41□□□□□ -1.86
SOX6-217ENST00000533870 C11orf1Q9H5F2 150 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 PDE4DIPQ5VU43 2346 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 IGKV1D-8A0A087WSZ0 117 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 IGHV2-26A0A0B4J1V2 119 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 NDUFB3O43676 98 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 CBLN1P23435 193 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 CLDN18P56856 261 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms