RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 MEIS3P1A6NDR6 274 aa8.04□□□□□ -1.12
CAPN1-225ENST00000533704 H3BUA1 57 aa8.04□□□□□ -1.12
CAPN1-225ENST00000533704 TNFSF12O43508 249 aa8.04□□□□□ -1.12
CAPN1-225ENST00000533704 AIREO43918 545 aa8.04□□□□□ -1.12
CAPN1-225ENST00000533704 SLC22A5O76082 557 aa8.04□□□□□ -1.12
CAPN1-225ENST00000533704 SAA1P0DJI8 122 aaPredicted RBP8.04□□□□□ -1.12
CAPN1-225ENST00000533704 FCGR2CP31995 323 aa8.04□□□□□ -1.12
CAPN1-225ENST00000533704 SCAND1P57086 179 aa8.04□□□□□ -1.12
CAPN1-225ENST00000533704 FXYD4P59646 89 aa8.04□□□□□ -1.12
CAPN1-225ENST00000533704 TIMM50Q3ZCQ8 353 aa8.04□□□□□ -1.12
CAPN1-225ENST00000533704 C10orf55Q5SWW7 151 aa8.04□□□□□ -1.12
CAPN1-225ENST00000533704 VKORC1L1Q8N0U8 176 aa8.04□□□□□ -1.12
CAPN1-225ENST00000533704 TSPAN14Q8NG11 270 aa8.04□□□□□ -1.12
CAPN1-225ENST00000533704 SRSF12Q8WXF0 261 aaKnown RBP8.04□□□□□ -1.12
CAPN1-225ENST00000533704 AUNIPQ9H7T9 357 aa8.04□□□□□ -1.12
CAPN1-225ENST00000533704 ZNF430Q9H8G1 570 aaPredicted RBP8.04□□□□□ -1.12
CAPN1-225ENST00000533704 LSM4Q9Y4Z0 139 aaKnown RBP8.04□□□□□ -1.12
CAPN1-225ENST00000533704 A0A087WXM4 84 aa8.03□□□□□ -1.12
CAPN1-225ENST00000533704 CREBL2O60519 120 aaPredicted RBP8.03□□□□□ -1.12
CAPN1-225ENST00000533704 IGLV2-14P01704 120 aa8.03□□□□□ -1.12
CAPN1-225ENST00000533704 PRH1P02810 166 aa8.03□□□□□ -1.12
CAPN1-225ENST00000533704 OR9G9P0C7N8 305 aa8.03□□□□□ -1.12
CAPN1-225ENST00000533704 SPNP16150 400 aa8.03□□□□□ -1.12
CAPN1-225ENST00000533704 ZP3P21754 424 aa8.03□□□□□ -1.12
CAPN1-225ENST00000533704 AADACP22760 399 aa8.03□□□□□ -1.12
CAPN1-225ENST00000533704 CDK10Q15131 360 aa8.03□□□□□ -1.12
CAPN1-225ENST00000533704 MRGPRG-AS1Q2M3A8 158 aa8.03□□□□□ -1.12
CAPN1-225ENST00000533704 ACSM6Q6P461 480 aa8.03□□□□□ -1.12
CAPN1-225ENST00000533704 SSX9Q7RTT3 188 aa8.03□□□□□ -1.12
CAPN1-225ENST00000533704 HOGA1Q86XE5 327 aa8.03□□□□□ -1.12
CAPN1-225ENST00000533704 MMD2Q8IY49 270 aa8.03□□□□□ -1.12
CAPN1-225ENST00000533704 OR6Q1Q8NGQ2 317 aa8.03□□□□□ -1.12
CAPN1-225ENST00000533704 OR4S2Q8NH73 311 aa8.03□□□□□ -1.12
CAPN1-225ENST00000533704 TMEM68Q96MH6 324 aa8.03□□□□□ -1.12
CAPN1-225ENST00000533704 HSD17B10Q99714 261 aaKnown RBP8.03□□□□□ -1.12
CAPN1-225ENST00000533704 ELOVL1Q9BW60 279 aa8.03□□□□□ -1.12
CAPN1-225ENST00000533704 TINAGL1Q9GZM7 467 aaPredicted RBP8.03□□□□□ -1.12
CAPN1-225ENST00000533704 RANGRFQ9HD47 186 aaPredicted RBP8.03□□□□□ -1.12
CAPN1-225ENST00000533704 IFT46Q9NQC8 304 aa8.03□□□□□ -1.12
CAPN1-225ENST00000533704 CCL28Q9NRJ3 127 aa8.03□□□□□ -1.12
CAPN1-225ENST00000533704 A0A0A6YYH2 397 aa8.02□□□□□ -1.13
CAPN1-225ENST00000533704 A6NJ64 397 aa8.02□□□□□ -1.13
CAPN1-225ENST00000533704 TNFAIP8O95379 198 aa8.02□□□□□ -1.13
CAPN1-225ENST00000533704 TRBV12-3P01733 135 aa8.02□□□□□ -1.13
CAPN1-225ENST00000533704 RPS19P39019 145 aaKnown RBP8.02□□□□□ -1.13
CAPN1-225ENST00000533704 TMEM17Q86X19 198 aa8.02□□□□□ -1.13
CAPN1-225ENST00000533704 MFSD4AQ8N468 514 aa8.02□□□□□ -1.13
CAPN1-225ENST00000533704 SAMD12Q8N8I0 201 aa8.02□□□□□ -1.13
CAPN1-225ENST00000533704 ADAD2Q8NCV1 583 aaKnown RBP8.02□□□□□ -1.13
CAPN1-225ENST00000533704 OR13F1Q8NGS4 319 aa8.02□□□□□ -1.13
CAPN1-225ENST00000533704 YIPF6Q96EC8 236 aa8.02□□□□□ -1.13
CAPN1-225ENST00000533704 S100A16Q96FQ6 103 aaKnown RBP8.02□□□□□ -1.13
CAPN1-225ENST00000533704 FYTTD1Q96QD9 318 aaKnown RBP8.02□□□□□ -1.13
CAPN1-225ENST00000533704 SLC5A7Q9GZV3 580 aa8.02□□□□□ -1.13
CAPN1-225ENST00000533704 SMAD5-AS1Q9Y6J3 95 aa8.02□□□□□ -1.13
CAPN1-225ENST00000533704 DNAH9Q9NYC9 4486 aa8.01□□□□□ -1.13
CAPN1-225ENST00000533704 DPPA5A6NC42 116 aa8.01□□□□□ -1.13
CAPN1-225ENST00000533704 HMX3A6NHT5 357 aa8.01□□□□□ -1.13
CAPN1-225ENST00000533704 RBMXL2O75526 392 aaKnown RBP8.01□□□□□ -1.13
CAPN1-225ENST00000533704 OR2A4O95047 310 aa8.01□□□□□ -1.13
CAPN1-225ENST00000533704 PPYP01298 95 aa8.01□□□□□ -1.13
CAPN1-225ENST00000533704 GP9P14770 177 aa8.01□□□□□ -1.13
CAPN1-225ENST00000533704 CBX5P45973 191 aa8.01□□□□□ -1.13
CAPN1-225ENST00000533704 SYNJ2BPP57105 145 aa8.01□□□□□ -1.13
CAPN1-225ENST00000533704 HERV-K104P61576 105 aa8.01□□□□□ -1.13
CAPN1-225ENST00000533704 RHOGP84095 191 aa8.01□□□□□ -1.13
CAPN1-225ENST00000533704 DYRK1AQ13627 763 aa8.01□□□□□ -1.13
CAPN1-225ENST00000533704 EXOSC2Q13868 293 aaKnown RBP8.01□□□□□ -1.13
CAPN1-225ENST00000533704 RPEL1Q2QD12 228 aa8.01□□□□□ -1.13
CAPN1-225ENST00000533704 UBE2NLQ5JXB2 153 aa8.01□□□□□ -1.13
CAPN1-225ENST00000533704 TMEM69Q5SWH9 247 aa8.01□□□□□ -1.13
CAPN1-225ENST00000533704 ZNF66Q6ZN08 573 aa8.01□□□□□ -1.13
CAPN1-225ENST00000533704 OVCH2Q7RTZ1 564 aa8.01□□□□□ -1.13
CAPN1-225ENST00000533704 ANKRD13BQ86YJ7 626 aa8.01□□□□□ -1.13
CAPN1-225ENST00000533704 CROCCP3Q8IVE0 287 aa8.01□□□□□ -1.13
CAPN1-225ENST00000533704 OR2A7Q96R45 310 aa8.01□□□□□ -1.13
CAPN1-225ENST00000533704 SPIN2AQ99865 258 aa8.01□□□□□ -1.13
CAPN1-225ENST00000533704 SPIN2BQ9BPZ2 258 aa8.01□□□□□ -1.13
CAPN1-225ENST00000533704 PEF1Q9UBV8 284 aaKnown RBP8.01□□□□□ -1.13
CAPN1-225ENST00000533704 ADAM30Q9UKF2 790 aa8.01□□□□□ -1.13
CAPN1-225ENST00000533704 U3KQK5 164 aa8.01□□□□□ -1.13
CAPN1-225ENST00000533704 SULT1C2O00338 296 aa8□□□□□ -1.13
CAPN1-225ENST00000533704 XRCC3O43542 346 aa8□□□□□ -1.13
CAPN1-225ENST00000533704 OR2J3O76001 311 aa8□□□□□ -1.13
CAPN1-225ENST00000533704 KBTBD11O94819 623 aa8□□□□□ -1.13
CAPN1-225ENST00000533704 HRASP01112 189 aa8□□□□□ -1.13
CAPN1-225ENST00000533704 NHLRC4P0CG21 123 aaPredicted RBP8□□□□□ -1.13
CAPN1-225ENST00000533704 KIR2DS2P43631 304 aa8□□□□□ -1.13
CAPN1-225ENST00000533704 RPL27AP46776 148 aaKnown RBP8□□□□□ -1.13
CAPN1-225ENST00000533704 TAS2R20P59543 309 aa8□□□□□ -1.13
CAPN1-225ENST00000533704 ATP5G2Q06055 141 aa8□□□□□ -1.13
CAPN1-225ENST00000533704 CATR1Q13166 79 aa8□□□□□ -1.13
CAPN1-225ENST00000533704 EIF4EBP1Q13541 118 aaPredicted RBP8□□□□□ -1.13
CAPN1-225ENST00000533704 C19orf35Q6ZS72 473 aa8□□□□□ -1.13
CAPN1-225ENST00000533704 SPAG16Q8N0X2 631 aa8□□□□□ -1.13
CAPN1-225ENST00000533704 OR51H1Q8NH63 302 aa8□□□□□ -1.13
CAPN1-225ENST00000533704 VSTM2AQ8TAG5 236 aa8□□□□□ -1.13
CAPN1-225ENST00000533704 SNAPC3Q92966 411 aa8□□□□□ -1.13
CAPN1-225ENST00000533704 USMG5Q96IX5 58 aa8□□□□□ -1.13
CAPN1-225ENST00000533704 WWC2-AS2Q96NR7 200 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms