RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 FAM240BA0A1B0GVZ2 78 aa12.29□□□□□ -0.44
CHMP4A-207ENST00000533523 HSPA12AO43301 675 aa12.29□□□□□ -0.44
CHMP4A-207ENST00000533523 PTTG1O95997 202 aa12.29□□□□□ -0.44
CHMP4A-207ENST00000533523 CCR6P51684 374 aa12.29□□□□□ -0.44
CHMP4A-207ENST00000533523 SCGB2B2Q4G0G5 96 aa12.29□□□□□ -0.44
CHMP4A-207ENST00000533523 TMEM17Q86X19 198 aa12.29□□□□□ -0.44
CHMP4A-207ENST00000533523 OR8H1Q8NGG4 311 aa12.29□□□□□ -0.44
CHMP4A-207ENST00000533523 OR10J5Q8NHC4 309 aa12.29□□□□□ -0.44
CHMP4A-207ENST00000533523 ENKURQ8TC29 256 aa12.29□□□□□ -0.44
CHMP4A-207ENST00000533523 C4orf3Q8WVX3 66 aa12.29□□□□□ -0.44
CHMP4A-207ENST00000533523 PRRT1Q99946 306 aa12.29□□□□□ -0.44
CHMP4A-207ENST00000533523 SLC2A8Q9NY64 477 aa12.29□□□□□ -0.44
CHMP4A-207ENST00000533523 SCP2D1Q9UJQ7 156 aa12.29□□□□□ -0.44
CHMP4A-207ENST00000533523 ZNF256Q9Y2P7 627 aaPredicted RBP12.29□□□□□ -0.44
CHMP4A-207ENST00000533523 ITGB1BP1O14713 200 aa12.28□□□□□ -0.44
CHMP4A-207ENST00000533523 MOSP00540 346 aa12.28□□□□□ -0.44
CHMP4A-207ENST00000533523 ELANEP08246 267 aa12.28□□□□□ -0.44
CHMP4A-207ENST00000533523 SPNP16150 400 aa12.28□□□□□ -0.44
CHMP4A-207ENST00000533523 VDAC1P21796 283 aa12.28□□□□□ -0.44
CHMP4A-207ENST00000533523 AADACP22760 399 aa12.28□□□□□ -0.44
CHMP4A-207ENST00000533523 NFYAP23511 347 aaPredicted RBP12.28□□□□□ -0.44
CHMP4A-207ENST00000533523 FCGR2CP31995 323 aa12.28□□□□□ -0.44
CHMP4A-207ENST00000533523 CDX1P47902 265 aaPredicted RBP12.28□□□□□ -0.44
CHMP4A-207ENST00000533523 ZNF660Q6AZW8 331 aaPredicted RBP12.28□□□□□ -0.44
CHMP4A-207ENST00000533523 FAM71F2Q6NXP2 309 aa12.28□□□□□ -0.44
CHMP4A-207ENST00000533523 DHRS11Q6UWP2 260 aa12.28□□□□□ -0.44
CHMP4A-207ENST00000533523 NRARPQ7Z6K4 114 aa12.28□□□□□ -0.44
CHMP4A-207ENST00000533523 H1FOOQ8IZA3 346 aaPredicted RBP12.28□□□□□ -0.44
CHMP4A-207ENST00000533523 Q8N6K4 173 aa12.28□□□□□ -0.44
CHMP4A-207ENST00000533523 OR6F1Q8NGZ6 308 aa12.28□□□□□ -0.44
CHMP4A-207ENST00000533523 EDARADDQ8WWZ3 215 aa12.28□□□□□ -0.44
CHMP4A-207ENST00000533523 RASL11BQ9BPW5 248 aa12.28□□□□□ -0.44
CHMP4A-207ENST00000533523 HSPB9Q9BQS6 159 aa12.28□□□□□ -0.44
CHMP4A-207ENST00000533523 ZNF2Q9BSG1 426 aaPredicted RBP12.28□□□□□ -0.44
CHMP4A-207ENST00000533523 GHITMQ9H3K2 345 aa12.28□□□□□ -0.44
CHMP4A-207ENST00000533523 PIPOXQ9P0Z9 390 aa12.28□□□□□ -0.44
CHMP4A-207ENST00000533523 TUSC2O75896 110 aa12.27□□□□□ -0.45
CHMP4A-207ENST00000533523 ZBTB25P24278 435 aa12.27□□□□□ -0.45
CHMP4A-207ENST00000533523 CEACAM6P40199 344 aa12.27□□□□□ -0.45
CHMP4A-207ENST00000533523 IDO2Q6ZQW0 420 aa12.27□□□□□ -0.45
CHMP4A-207ENST00000533523 LHFPL1Q86WI0 220 aa12.27□□□□□ -0.45
CHMP4A-207ENST00000533523 RNF152Q8N8N0 203 aa12.27□□□□□ -0.45
CHMP4A-207ENST00000533523 MUC7Q8TAX7 377 aa12.27□□□□□ -0.45
CHMP4A-207ENST00000533523 GIMAP1Q8WWP7 306 aa12.27□□□□□ -0.45
CHMP4A-207ENST00000533523 S1PR3Q99500 378 aa12.27□□□□□ -0.45
CHMP4A-207ENST00000533523 PARP12Q9H0J9 701 aaKnown RBP12.27□□□□□ -0.45
CHMP4A-207ENST00000533523 OR5H14A6NHG9 310 aa12.26□□□□□ -0.45
CHMP4A-207ENST00000533523 PPYP01298 95 aa12.26□□□□□ -0.45
CHMP4A-207ENST00000533523 IGHG4P01861 327 aa12.26□□□□□ -0.45
CHMP4A-207ENST00000533523 FXYD4P59646 89 aa12.26□□□□□ -0.45
CHMP4A-207ENST00000533523 HERV-K104P61576 105 aa12.26□□□□□ -0.45
CHMP4A-207ENST00000533523 FHL3Q13643 280 aa12.26□□□□□ -0.45
CHMP4A-207ENST00000533523 ZNF833PQ6ZTB9 187 aa12.26□□□□□ -0.45
CHMP4A-207ENST00000533523 OR13C8Q8NGS7 320 aa12.26□□□□□ -0.45
CHMP4A-207ENST00000533523 TERB2Q8NHR7 220 aa12.26□□□□□ -0.45
CHMP4A-207ENST00000533523 MOB3AQ96BX8 217 aa12.26□□□□□ -0.45
CHMP4A-207ENST00000533523 RBMXL1Q96E39 390 aaKnown RBP12.26□□□□□ -0.45
CHMP4A-207ENST00000533523 TOLLIPQ9H0E2 274 aa12.26□□□□□ -0.45
CHMP4A-207ENST00000533523 FXYD6Q9H0Q3 95 aa12.26□□□□□ -0.45
CHMP4A-207ENST00000533523 IFI27L2Q9H2X8 130 aa12.26□□□□□ -0.45
CHMP4A-207ENST00000533523 RDH8Q9NYR8 311 aa12.26□□□□□ -0.45
CHMP4A-207ENST00000533523 SAA2-SAA4A0A096LPE2 208 aa12.25□□□□□ -0.45
CHMP4A-207ENST00000533523 RAB29O14966 203 aa12.25□□□□□ -0.45
CHMP4A-207ENST00000533523 ST8SIA5O15466 376 aa12.25□□□□□ -0.45
CHMP4A-207ENST00000533523 NDUFB6O95139 128 aa12.25□□□□□ -0.45
CHMP4A-207ENST00000533523 SAA2P0DJI9 122 aaPredicted RBP12.25□□□□□ -0.45
CHMP4A-207ENST00000533523 CFHR3Q02985 330 aa12.25□□□□□ -0.45
CHMP4A-207ENST00000533523 RBMS2Q15434 407 aaKnown RBP12.25□□□□□ -0.45
CHMP4A-207ENST00000533523 TRIM16LQ309B1 348 aa12.25□□□□□ -0.45
CHMP4A-207ENST00000533523 CASC10Q5T4H9 136 aa12.25□□□□□ -0.45
CHMP4A-207ENST00000533523 AADACL3Q5VUY0 350 aa12.25□□□□□ -0.45
CHMP4A-207ENST00000533523 ODF3L1Q8IXM7 274 aa12.25□□□□□ -0.45
CHMP4A-207ENST00000533523 DUSP18Q8NEJ0 188 aa12.25□□□□□ -0.45
CHMP4A-207ENST00000533523 OR11H1Q8NG94 326 aa12.25□□□□□ -0.45
CHMP4A-207ENST00000533523 MRGPRFQ96AM1 343 aa12.25□□□□□ -0.45
CHMP4A-207ENST00000533523 RCHY1Q96PM5 261 aa12.25□□□□□ -0.45
CHMP4A-207ENST00000533523 MRPL20Q9BYC9 149 aaKnown RBP12.25□□□□□ -0.45
CHMP4A-207ENST00000533523 COPZ2Q9P299 210 aa12.25□□□□□ -0.45
CHMP4A-207ENST00000533523 OR2W1Q9Y3N9 320 aa12.25□□□□□ -0.45
CHMP4A-207ENST00000533523 SMAD5-AS1Q9Y6J3 95 aa12.25□□□□□ -0.45
CHMP4A-207ENST00000533523 IGKV1D-13A0A0B4J2D9 117 aa12.24□□□□□ -0.45
CHMP4A-207ENST00000533523 TCRBP04435 133 aa12.24□□□□□ -0.45
CHMP4A-207ENST00000533523 OR8U8P0C7N1 319 aa12.24□□□□□ -0.45
CHMP4A-207ENST00000533523 IGKV1-13P0DP09 117 aa12.24□□□□□ -0.45
CHMP4A-207ENST00000533523 PGAM2P15259 253 aa12.24□□□□□ -0.45
CHMP4A-207ENST00000533523 TNCP24821 2201 aa12.24□□□□□ -0.45
CHMP4A-207ENST00000533523 PSMB8P28062 276 aa12.24□□□□□ -0.45
CHMP4A-207ENST00000533523 OXA1LQ15070 435 aa12.24□□□□□ -0.45
CHMP4A-207ENST00000533523 CENPSQ8N2Z9 138 aa12.24□□□□□ -0.45
CHMP4A-207ENST00000533523 FAM71E2Q8N5Q1 922 aa12.24□□□□□ -0.45
CHMP4A-207ENST00000533523 MINDY2Q8NBR6 621 aa12.24□□□□□ -0.45
CHMP4A-207ENST00000533523 MARCH1Q8TCQ1 289 aa12.24□□□□□ -0.45
CHMP4A-207ENST00000533523 OR5B12Q96R08 314 aa12.24□□□□□ -0.45
CHMP4A-207ENST00000533523 NABP2Q9BQ15 211 aa12.24□□□□□ -0.45
CHMP4A-207ENST00000533523 SLC25A21Q9BQT8 299 aaPredicted RBP12.24□□□□□ -0.45
CHMP4A-207ENST00000533523 PLSCR3Q9NRY6 295 aa12.24□□□□□ -0.45
CHMP4A-207ENST00000533523 NUBP2Q9Y5Y2 271 aa12.24□□□□□ -0.45
CHMP4A-207ENST00000533523 F2RL1P55085 397 aa12.23□□□□□ -0.45
CHMP4A-207ENST00000533523 TMEM65Q6PI78 240 aa12.23□□□□□ -0.45
CHMP4A-207ENST00000533523 PLET1Q6UQ28 207 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms