RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 GFI1Q99684 422 aa14.9□□□□□ -0.02
PHRF1-205ENST00000533464 GFRA3O60609 400 aa14.9□□□□□ -0.02
PHRF1-205ENST00000533464 TRGC2P03986 189 aa14.9□□□□□ -0.02
PHRF1-205ENST00000533464 ELOBQ15370 118 aa14.9□□□□□ -0.02
PHRF1-205ENST00000533464 RPL39P5Q59GN2 51 aa14.9□□□□□ -0.02
PHRF1-205ENST00000533464 FAM201AQ5SY85 155 aa14.9□□□□□ -0.02
PHRF1-205ENST00000533464 PRNTQ86SH4 94 aa14.9□□□□□ -0.02
PHRF1-205ENST00000533464 MIOXQ9UGB7 285 aa14.9□□□□□ -0.02
PHRF1-205ENST00000533464 ZNF716A6NP11 495 aa14.9□□□□□ -0.02
PHRF1-205ENST00000533464 LYZL4Q96KX0 146 aa14.9□□□□□ -0.02
PHRF1-205ENST00000533464 CACNA1HO95180 2353 aa14.9□□□□□ -0.02
PHRF1-205ENST00000533464 NTN3O00634 580 aaPredicted RBP14.89□□□□□ -0.03
PHRF1-205ENST00000533464 UCP1P25874 307 aa14.89□□□□□ -0.03
PHRF1-205ENST00000533464 RNF151Q2KHN1 245 aa14.89□□□□□ -0.03
PHRF1-205ENST00000533464 C19orf35Q6ZS72 473 aa14.89□□□□□ -0.03
PHRF1-205ENST00000533464 OR4C13Q8NGP0 309 aa14.89□□□□□ -0.03
PHRF1-205ENST00000533464 SNRNP40Q96DI7 357 aaKnown RBP14.89□□□□□ -0.03
PHRF1-205ENST00000533464 ZNF430Q9H8G1 570 aaPredicted RBP14.89□□□□□ -0.03
PHRF1-205ENST00000533464 ISLRO14498 428 aa14.89□□□□□ -0.03
PHRF1-205ENST00000533464 SCNM1Q9BWG6 230 aa14.89□□□□□ -0.03
PHRF1-205ENST00000533464 SBF1O95248 1867 aa14.89□□□□□ -0.03
PHRF1-205ENST00000533464 IGHV1-69-2A0A0G2JMI3 117 aa14.89□□□□□ -0.03
PHRF1-205ENST00000533464 APCSP02743 223 aa14.89□□□□□ -0.03
PHRF1-205ENST00000533464 FBLN5Q9UBX5 448 aa14.89□□□□□ -0.03
PHRF1-205ENST00000533464 ZNF646O15015 1829 aaPredicted RBP14.89□□□□□ -0.03
PHRF1-205ENST00000533464 PRSS1P07477 247 aa14.89□□□□□ -0.03
PHRF1-205ENST00000533464 OR4A5Q8NH83 315 aa14.89□□□□□ -0.03
PHRF1-205ENST00000533464 PLSCR2Q9NRY7 297 aa14.89□□□□□ -0.03
PHRF1-205ENST00000533464 BMPR1BO00238 502 aa14.89□□□□□ -0.03
PHRF1-205ENST00000533464 MUC15Q8N387 334 aa14.89□□□□□ -0.03
PHRF1-205ENST00000533464 QTRT1Q9BXR0 403 aaKnown RBP14.89□□□□□ -0.03
PHRF1-205ENST00000533464 IGHV2OR16-5A0A0B4J2B6 119 aa14.88□□□□□ -0.03
PHRF1-205ENST00000533464 OR2T8A6NH00 312 aa14.88□□□□□ -0.03
PHRF1-205ENST00000533464 C1orf162Q8NEQ5 155 aaPredicted RBP14.88□□□□□ -0.03
PHRF1-205ENST00000533464 RPRMQ9NS64 109 aa14.88□□□□□ -0.03
PHRF1-205ENST00000533464 DICER1Q9UPY3 1922 aaKnown RBP14.88□□□□□ -0.03
PHRF1-205ENST00000533464 G0S2P27469 103 aa14.88□□□□□ -0.03
PHRF1-205ENST00000533464 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.88□□□□□ -0.03
PHRF1-205ENST00000533464 PAQR4Q8N4S7 273 aaPredicted RBP14.88□□□□□ -0.03
PHRF1-205ENST00000533464 C9orf106Q8NAJ2 232 aa14.88□□□□□ -0.03
PHRF1-205ENST00000533464 LINC01560Q8TB33 94 aa14.88□□□□□ -0.03
PHRF1-205ENST00000533464 PQLC2LA1A4F0 135 aa14.88□□□□□ -0.03
PHRF1-205ENST00000533464 RNF222A6NCQ9 220 aa14.88□□□□□ -0.03
PHRF1-205ENST00000533464 FAM106CPP0CH98 169 aa14.88□□□□□ -0.03
PHRF1-205ENST00000533464 CEACAM1P13688 526 aa14.88□□□□□ -0.03
PHRF1-205ENST00000533464 RABAC1Q9UI14 185 aa14.88□□□□□ -0.03
PHRF1-205ENST00000533464 A0A087X0M5 115 aa14.88□□□□□ -0.03
PHRF1-205ENST00000533464 A0A1B0GX30 115 aa14.88□□□□□ -0.03
PHRF1-205ENST00000533464 CCL1P22362 96 aa14.88□□□□□ -0.03
PHRF1-205ENST00000533464 CD40P25942 277 aa14.88□□□□□ -0.03
PHRF1-205ENST00000533464 CLEC2AQ6UVW9 174 aa14.88□□□□□ -0.03
PHRF1-205ENST00000533464 WDFY1Q8IWB7 410 aa14.88□□□□□ -0.03
PHRF1-205ENST00000533464 TMEM186Q96B77 213 aa14.88□□□□□ -0.03
PHRF1-205ENST00000533464 PINLYPA6NC86 204 aa14.87□□□□□ -0.03
PHRF1-205ENST00000533464 PGPA6NDG6 321 aa14.87□□□□□ -0.03
PHRF1-205ENST00000533464 ARL14EPLP0DKL9 152 aa14.87□□□□□ -0.03
PHRF1-205ENST00000533464 GBGT1Q8N5D6 347 aa14.87□□□□□ -0.03
PHRF1-205ENST00000533464 OR13A1Q8NGR1 328 aa14.87□□□□□ -0.03
PHRF1-205ENST00000533464 DNAJC4Q9NNZ3 241 aa14.87□□□□□ -0.03
PHRF1-205ENST00000533464 ELOVL5Q9NYP7 299 aa14.87□□□□□ -0.03
PHRF1-205ENST00000533464 ZNF98A6NK75 572 aa14.87□□□□□ -0.03
PHRF1-205ENST00000533464 IGHV3-48P01763 117 aa14.87□□□□□ -0.03
PHRF1-205ENST00000533464 DCTN5Q9BTE1 182 aa14.87□□□□□ -0.03
PHRF1-205ENST00000533464 TMEM191AQ9H0A3 160 aa14.87□□□□□ -0.03
PHRF1-205ENST00000533464 TRAV14DV4A0A0A6YYC5 116 aa14.87□□□□□ -0.03
PHRF1-205ENST00000533464 REG1AP05451 166 aa14.87□□□□□ -0.03
PHRF1-205ENST00000533464 ABHD17AQ96GS6 310 aa14.87□□□□□ -0.03
PHRF1-205ENST00000533464 ZNF735P0CB33 412 aa14.86□□□□□ -0.03
PHRF1-205ENST00000533464 MARVELD3Q96A59 401 aa14.86□□□□□ -0.03
PHRF1-205ENST00000533464 TMEM30BQ3MIR4 351 aa14.86□□□□□ -0.03
PHRF1-205ENST00000533464 IBA57Q5T440 356 aaKnown RBP14.86□□□□□ -0.03
PHRF1-205ENST00000533464 ZNF383Q8NA42 475 aa14.86□□□□□ -0.03
PHRF1-205ENST00000533464 GUCD1Q96NT3 240 aa14.86□□□□□ -0.03
PHRF1-205ENST00000533464 C8orf88P0DMB2 117 aa14.86□□□□□ -0.03
PHRF1-205ENST00000533464 LRRC75BQ2VPJ9 315 aa14.86□□□□□ -0.03
PHRF1-205ENST00000533464 WDR25Q64LD2 544 aaPredicted RBP14.86□□□□□ -0.03
PHRF1-205ENST00000533464 FAM216BQ8N7L0 139 aa14.86□□□□□ -0.03
PHRF1-205ENST00000533464 ZIC4Q8N9L1 334 aa14.86□□□□□ -0.03
PHRF1-205ENST00000533464 RALYQ9UKM9 306 aaKnown RBP14.86□□□□□ -0.03
PHRF1-205ENST00000533464 C17orf98A8MV24 154 aa14.85□□□□□ -0.03
PHRF1-205ENST00000533464 A8MWL6 223 aa14.85□□□□□ -0.03
PHRF1-205ENST00000533464 B9A039 149 aa14.85□□□□□ -0.03
PHRF1-205ENST00000533464 Q6ZN92 141 aa14.85□□□□□ -0.03
PHRF1-205ENST00000533464 WFDC3Q8IUB2 231 aa14.85□□□□□ -0.03
PHRF1-205ENST00000533464 HTN1P15515 57 aa14.85□□□□□ -0.03
PHRF1-205ENST00000533464 EAF1Q96JC9 268 aaPredicted RBP14.85□□□□□ -0.03
PHRF1-205ENST00000533464 ATXN7O15265 892 aaPredicted RBP14.85□□□□□ -0.03
PHRF1-205ENST00000533464 PSMG3Q9BT73 122 aaPredicted RBP14.85□□□□□ -0.03
PHRF1-205ENST00000533464 CLEC7AQ9BXN2 247 aa14.85□□□□□ -0.03
PHRF1-205ENST00000533464 GSX1Q9H4S2 264 aaPredicted RBP14.85□□□□□ -0.03
PHRF1-205ENST00000533464 FGFBP3Q8TAT2 258 aa14.85□□□□□ -0.03
PHRF1-205ENST00000533464 BPIFA4PQ86YQ2 179 aa14.84□□□□□ -0.03
PHRF1-205ENST00000533464 FAM89BQ8N5H3 189 aa14.84□□□□□ -0.03
PHRF1-205ENST00000533464 TMEM116Q8NCL8 245 aa14.84□□□□□ -0.03
PHRF1-205ENST00000533464 NPIPB3Q92617 1050 aa14.84□□□□□ -0.03
PHRF1-205ENST00000533464 ZNF146Q15072 292 aa14.84□□□□□ -0.03
PHRF1-205ENST00000533464 ZNF343Q6P1L6 599 aa14.84□□□□□ -0.03
PHRF1-205ENST00000533464 FAM131CQ96AQ9 280 aa14.84□□□□□ -0.03
PHRF1-205ENST00000533464 RCC1LQ96I51 464 aaKnown RBP14.84□□□□□ -0.03
PHRF1-205ENST00000533464 RBM14Q96PK6 669 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms