RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 CAMLGP49069 296 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 DYNLT3P51808 116 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 KRTAP10-3P60369 221 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 RPL15P61313 204 aaKnown RBP6.72□□□□□ -1.33
NEDD8-207ENST00000533242 ERVK11-1P61568 191 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 PSG7Q13046 419 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 GNMTQ14749 295 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 FAM76BQ5HYJ3 339 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 FIP1L1Q6UN15 594 aaKnown RBP6.72□□□□□ -1.33
NEDD8-207ENST00000533242 Q6YL49 198 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 ZNF826PQ6ZT77 177 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 FAM185AQ8N0U4 392 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 OR5C1Q8NGR4 320 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 RXFP4Q8TDU9 374 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 RARRES2Q99969 163 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 C20orf24Q9BUV8 137 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 LYRM2Q9NU23 88 aaPredicted RBP6.72□□□□□ -1.33
NEDD8-207ENST00000533242 FBXO7Q9Y3I1 522 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 OR2W1Q9Y3N9 320 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 TRBV6-6A0A0A6YYG2 114 aa6.71□□□□□ -1.33
NEDD8-207ENST00000533242 BORCS7-ASMTA0A0B4J1R7 106 aa6.71□□□□□ -1.33
NEDD8-207ENST00000533242 H0Y980 276 aa6.71□□□□□ -1.33
NEDD8-207ENST00000533242 DEGS1O15121 323 aa6.71□□□□□ -1.33
NEDD8-207ENST00000533242 PSPNO60542 156 aa6.71□□□□□ -1.33
NEDD8-207ENST00000533242 TUBG1P23258 451 aa6.71□□□□□ -1.33
NEDD8-207ENST00000533242 RELBQ01201 579 aa6.71□□□□□ -1.33
NEDD8-207ENST00000533242 GUK1Q16774 197 aa6.71□□□□□ -1.33
NEDD8-207ENST00000533242 DOCK11Q5JSL3 2073 aa6.71□□□□□ -1.33
NEDD8-207ENST00000533242 ZFP82Q8N141 532 aa6.71□□□□□ -1.33
NEDD8-207ENST00000533242 OR5D13Q8NGL4 314 aa6.71□□□□□ -1.33
NEDD8-207ENST00000533242 OR10J5Q8NHC4 309 aa6.71□□□□□ -1.33
NEDD8-207ENST00000533242 FAM213BQ8TBF2 198 aa6.71□□□□□ -1.33
NEDD8-207ENST00000533242 ITLN1Q8WWA0 313 aa6.71□□□□□ -1.33
NEDD8-207ENST00000533242 GPR146Q96CH1 333 aa6.71□□□□□ -1.33
NEDD8-207ENST00000533242 CLCC1Q96S66 551 aa6.71□□□□□ -1.33
NEDD8-207ENST00000533242 CABLES2Q9BTV7 478 aa6.71□□□□□ -1.33
NEDD8-207ENST00000533242 PKIBQ9C010 78 aa6.71□□□□□ -1.33
NEDD8-207ENST00000533242 SAV1Q9H4B6 383 aaPredicted RBP6.71□□□□□ -1.33
NEDD8-207ENST00000533242 TUBG2Q9NRH3 451 aa6.71□□□□□ -1.33
NEDD8-207ENST00000533242 MIOXQ9UGB7 285 aa6.71□□□□□ -1.33
NEDD8-207ENST00000533242 IL19Q9UHD0 177 aa6.71□□□□□ -1.33
NEDD8-207ENST00000533242 COLCA2A8K830 154 aa6.71□□□□□ -1.34
NEDD8-207ENST00000533242 TMEM178BH3BS89 294 aa6.71□□□□□ -1.34
NEDD8-207ENST00000533242 MLNRO43193 412 aa6.71□□□□□ -1.34
NEDD8-207ENST00000533242 PITX3O75364 302 aa6.71□□□□□ -1.34
NEDD8-207ENST00000533242 IGKV1-5P01602 117 aa6.71□□□□□ -1.34
NEDD8-207ENST00000533242 PRH1P02810 166 aa6.71□□□□□ -1.34
NEDD8-207ENST00000533242 GRPP07492 148 aa6.71□□□□□ -1.34
NEDD8-207ENST00000533242 KITLGP21583 273 aa6.71□□□□□ -1.34
NEDD8-207ENST00000533242 ZNF585BQ52M93 769 aa6.71□□□□□ -1.34
NEDD8-207ENST00000533242 SPSB3Q6PJ21 355 aa6.71□□□□□ -1.34
NEDD8-207ENST00000533242 ZNF497Q6ZNH5 498 aa6.71□□□□□ -1.34
NEDD8-207ENST00000533242 Q6ZR03 302 aa6.71□□□□□ -1.34
NEDD8-207ENST00000533242 OR2Z1Q8NG97 314 aa6.71□□□□□ -1.34
NEDD8-207ENST00000533242 OR10Z1Q8NGY1 313 aa6.71□□□□□ -1.34
NEDD8-207ENST00000533242 C2CD4CQ8TF44 421 aa6.71□□□□□ -1.34
NEDD8-207ENST00000533242 ISOC2Q96AB3 205 aa6.71□□□□□ -1.34
NEDD8-207ENST00000533242 C5orf30Q96GV9 206 aa6.71□□□□□ -1.34
NEDD8-207ENST00000533242 AIFM2Q9BRQ8 373 aa6.71□□□□□ -1.34
NEDD8-207ENST00000533242 OPA3Q9H6K4 179 aa6.71□□□□□ -1.34
NEDD8-207ENST00000533242 ZFP57Q9NU63 452 aa6.71□□□□□ -1.34
NEDD8-207ENST00000533242 PPP1R3CQ9UQK1 317 aa6.71□□□□□ -1.34
NEDD8-207ENST00000533242 CMYA5Q8N3K9 4069 aa6.7□□□□□ -1.34
NEDD8-207ENST00000533242 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.7□□□□□ -1.34
NEDD8-207ENST00000533242 NDUFA2O43678 99 aa6.7□□□□□ -1.34
NEDD8-207ENST00000533242 TSPAN9O75954 239 aa6.7□□□□□ -1.34
NEDD8-207ENST00000533242 PGA5P0DJD9 388 aa6.7□□□□□ -1.34
NEDD8-207ENST00000533242 GNB2P62879 340 aa6.7□□□□□ -1.34
NEDD8-207ENST00000533242 SRPXP78539 464 aa6.7□□□□□ -1.34
NEDD8-207ENST00000533242 TMEM267Q0VDI3 215 aaPredicted RBP6.7□□□□□ -1.34
NEDD8-207ENST00000533242 C1QL4Q86Z23 238 aa6.7□□□□□ -1.34
NEDD8-207ENST00000533242 CMTM1Q8IZ96 169 aa6.7□□□□□ -1.34
NEDD8-207ENST00000533242 OR2G3Q8NGZ4 309 aa6.7□□□□□ -1.34
NEDD8-207ENST00000533242 NEIL1Q96FI4 390 aaPredicted RBP6.7□□□□□ -1.34
NEDD8-207ENST00000533242 EIF5A2Q9GZV4 153 aaKnown RBP6.7□□□□□ -1.34
NEDD8-207ENST00000533242 IFT22Q9H7X7 185 aa6.7□□□□□ -1.34
NEDD8-207ENST00000533242 SPACA1Q9HBV2 294 aa6.7□□□□□ -1.34
NEDD8-207ENST00000533242 TNFRSF19Q9NS68 423 aa6.7□□□□□ -1.34
NEDD8-207ENST00000533242 RNF114Q9Y508 228 aa6.7□□□□□ -1.34
NEDD8-207ENST00000533242 H7C2Y5 167 aa6.7□□□□□ -1.34
NEDD8-207ENST00000533242 WRBO00258 174 aa6.7□□□□□ -1.34
NEDD8-207ENST00000533242 FSTL3O95633 263 aa6.7□□□□□ -1.34
NEDD8-207ENST00000533242 CTXN2P0C2S0 81 aa6.7□□□□□ -1.34
NEDD8-207ENST00000533242 OR13C7P0DN81 318 aa6.7□□□□□ -1.34
NEDD8-207ENST00000533242 LINC00205P59089 165 aa6.7□□□□□ -1.34
NEDD8-207ENST00000533242 ARL16Q0P5N6 197 aa6.7□□□□□ -1.34
NEDD8-207ENST00000533242 BRD3OSQ6XYD6 125 aa6.7□□□□□ -1.34
NEDD8-207ENST00000533242 LINC00596Q86U02 117 aa6.7□□□□□ -1.34
NEDD8-207ENST00000533242 C11orf53Q8IXP5 236 aa6.7□□□□□ -1.34
NEDD8-207ENST00000533242 OR10V1Q8NGI7 309 aa6.7□□□□□ -1.34
NEDD8-207ENST00000533242 RTL8AQ9BWD3 113 aa6.7□□□□□ -1.34
NEDD8-207ENST00000533242 OR14J1Q9UGF5 321 aa6.7□□□□□ -1.34
NEDD8-207ENST00000533242 PRELID3BQ9Y3B1 194 aa6.7□□□□□ -1.34
NEDD8-207ENST00000533242 TNFRSF13BO14836 293 aaPredicted RBP6.69□□□□□ -1.34
NEDD8-207ENST00000533242 EIF3GO75821 320 aaKnown RBP eCLIP6.69□□□□□ -1.341e-7■■■■□ 19.4
NEDD8-207ENST00000533242 NXPH2O95156 264 aa6.69□□□□□ -1.34
NEDD8-207ENST00000533242 FBP1P09467 338 aa6.69□□□□□ -1.34
NEDD8-207ENST00000533242 PROK1P58294 105 aa6.69□□□□□ -1.34
NEDD8-207ENST00000533242 FLI1Q01543 452 aaPredicted RBP6.69□□□□□ -1.34
NEDD8-207ENST00000533242 HAGHQ16775 308 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms