RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 OXLD1Q5BKU9 147 aa13.08□□□□□ -0.32
PKP3-209ENST00000533069 IGSF11Q5DX21 431 aa13.08□□□□□ -0.32
PKP3-209ENST00000533069 CXorf66Q5JRM2 361 aaPredicted RBP13.08□□□□□ -0.32
PKP3-209ENST00000533069 ZNF660Q6AZW8 331 aaPredicted RBP13.08□□□□□ -0.32
PKP3-209ENST00000533069 RNF152Q8N8N0 203 aa13.08□□□□□ -0.32
PKP3-209ENST00000533069 OR4D10Q8NGI6 311 aa13.08□□□□□ -0.32
PKP3-209ENST00000533069 ZFAND1Q8TCF1 268 aa13.08□□□□□ -0.32
PKP3-209ENST00000533069 MOB3AQ96BX8 217 aa13.08□□□□□ -0.32
PKP3-209ENST00000533069 RBMXL1Q96E39 390 aaKnown RBP13.08□□□□□ -0.32
PKP3-209ENST00000533069 ZNF486Q96H40 463 aaPredicted RBP13.08□□□□□ -0.32
PKP3-209ENST00000533069 RCC1LQ96I51 464 aaKnown RBP13.08□□□□□ -0.32
PKP3-209ENST00000533069 RITA1Q96K30 269 aa13.08□□□□□ -0.32
PKP3-209ENST00000533069 RNF5Q99942 180 aa13.08□□□□□ -0.32
PKP3-209ENST00000533069 ZNF2Q9BSG1 426 aaPredicted RBP13.08□□□□□ -0.32
PKP3-209ENST00000533069 OR2W1Q9Y3N9 320 aa13.08□□□□□ -0.32
PKP3-209ENST00000533069 H7C2Y5 167 aa13.07□□□□□ -0.32
PKP3-209ENST00000533069 DUS4LO95620 317 aaKnown RBP13.07□□□□□ -0.32
PKP3-209ENST00000533069 PPYP01298 95 aa13.07□□□□□ -0.32
PKP3-209ENST00000533069 IGHG4P01861 327 aa13.07□□□□□ -0.32
PKP3-209ENST00000533069 CNTFRP26992 372 aa13.07□□□□□ -0.32
PKP3-209ENST00000533069 S100GP29377 79 aa13.07□□□□□ -0.32
PKP3-209ENST00000533069 BTCP35070 178 aa13.07□□□□□ -0.32
PKP3-209ENST00000533069 LIN54Q6MZP7 749 aa13.07□□□□□ -0.32
PKP3-209ENST00000533069 NRARPQ7Z6K4 114 aa13.07□□□□□ -0.32
PKP3-209ENST00000533069 ZNF695Q8IW36 515 aa13.07□□□□□ -0.32
PKP3-209ENST00000533069 KLHL30-AS1Q8NEE0 82 aa13.07□□□□□ -0.32
PKP3-209ENST00000533069 OR51J1Q9H342 316 aa13.07□□□□□ -0.32
PKP3-209ENST00000533069 RNF150Q9ULK6 438 aa13.07□□□□□ -0.32
PKP3-209ENST00000533069 TCRBP04435 133 aa13.06□□□□□ -0.32
PKP3-209ENST00000533069 MYCNOSP40205 109 aa13.06□□□□□ -0.32
PKP3-209ENST00000533069 LUMP51884 338 aaPredicted RBP13.06□□□□□ -0.32
PKP3-209ENST00000533069 FAAP20Q6NZ36 180 aa13.06□□□□□ -0.32
PKP3-209ENST00000533069 GLDNQ6ZMI3 551 aaPredicted RBP13.06□□□□□ -0.32
PKP3-209ENST00000533069 SLC38A6Q8IZM9 456 aa13.06□□□□□ -0.32
PKP3-209ENST00000533069 LINC00482Q8N8I6 264 aa13.06□□□□□ -0.32
PKP3-209ENST00000533069 ZBTB34Q8NCN2 500 aa13.06□□□□□ -0.32
PKP3-209ENST00000533069 GAB2Q9UQC2 676 aa13.06□□□□□ -0.32
PKP3-209ENST00000533069 IGHV7-81A0A0B4J1V7 117 aa13.05□□□□□ -0.32
PKP3-209ENST00000533069 RRHO14718 337 aa13.05□□□□□ -0.32
PKP3-209ENST00000533069 PROP1O75360 226 aa13.05□□□□□ -0.32
PKP3-209ENST00000533069 APOA2P02652 100 aa13.05□□□□□ -0.32
PKP3-209ENST00000533069 IGLL1P15814 213 aa13.05□□□□□ -0.32
PKP3-209ENST00000533069 CDX1P47902 265 aaPredicted RBP13.05□□□□□ -0.32
PKP3-209ENST00000533069 THBS3P49746 956 aa13.05□□□□□ -0.32
PKP3-209ENST00000533069 TAS2R31P59538 309 aa13.05□□□□□ -0.32
PKP3-209ENST00000533069 UBE2MP61081 183 aaKnown RBP13.05□□□□□ -0.32
PKP3-209ENST00000533069 AADACL3Q5VUY0 350 aa13.05□□□□□ -0.32
PKP3-209ENST00000533069 ETV3LQ6ZN32 361 aa13.05□□□□□ -0.32
PKP3-209ENST00000533069 C8orf86Q6ZUL3 223 aa13.05□□□□□ -0.32
PKP3-209ENST00000533069 PDPNQ86YL7 162 aa13.05□□□□□ -0.32
PKP3-209ENST00000533069 MRPL41Q8IXM3 137 aaKnown RBP13.05□□□□□ -0.32
PKP3-209ENST00000533069 MARVELD1Q9BSK0 173 aa13.05□□□□□ -0.32
PKP3-209ENST00000533069 GPR61Q9BZJ8 451 aa13.05□□□□□ -0.32
PKP3-209ENST00000533069 OR2D2Q9H210 308 aa13.05□□□□□ -0.32
PKP3-209ENST00000533069 PARP11Q9NR21 331 aa13.05□□□□□ -0.32
PKP3-209ENST00000533069 RBM7Q9Y580 266 aaKnown RBP13.05□□□□□ -0.32
PKP3-209ENST00000533069 ATP6V0E1O15342 81 aa13.04□□□□□ -0.32
PKP3-209ENST00000533069 PRAF2O60831 178 aa13.04□□□□□ -0.32
PKP3-209ENST00000533069 SPDEFO95238 335 aa13.04□□□□□ -0.32
PKP3-209ENST00000533069 DHFRP00374 187 aa13.04□□□□□ -0.32
PKP3-209ENST00000533069 RPLP1P05386 114 aaKnown RBP13.04□□□□□ -0.32
PKP3-209ENST00000533069 OR8U9P0C7N5 309 aa13.04□□□□□ -0.32
PKP3-209ENST00000533069 AADACP22760 399 aa13.04□□□□□ -0.32
PKP3-209ENST00000533069 NFYAP23511 347 aaPredicted RBP13.04□□□□□ -0.32
PKP3-209ENST00000533069 PSMB8P28062 276 aa13.04□□□□□ -0.32
PKP3-209ENST00000533069 MECP2P51608 486 aaKnown RBP13.04□□□□□ -0.32
PKP3-209ENST00000533069 CCR6P51684 374 aa13.04□□□□□ -0.32
PKP3-209ENST00000533069 PLGLAQ15195 96 aa13.04□□□□□ -0.32
PKP3-209ENST00000533069 CMTM1Q8IZ96 169 aa13.04□□□□□ -0.32
PKP3-209ENST00000533069 ZNF383Q8NA42 475 aa13.04□□□□□ -0.32
PKP3-209ENST00000533069 DRAXINQ8NBI3 349 aaPredicted RBP13.04□□□□□ -0.32
PKP3-209ENST00000533069 OR8U1Q8NH10 309 aa13.04□□□□□ -0.32
PKP3-209ENST00000533069 TSNAXQ99598 290 aaKnown RBP13.04□□□□□ -0.32
PKP3-209ENST00000533069 ALX4Q9H161 411 aaPredicted RBP13.04□□□□□ -0.32
PKP3-209ENST00000533069 C20orf85Q9H1P6 137 aa13.04□□□□□ -0.32
PKP3-209ENST00000533069 FBXL15Q9H469 300 aa13.04□□□□□ -0.32
PKP3-209ENST00000533069 C14orf166Q9Y224 244 aaKnown RBP13.04□□□□□ -0.32
PKP3-209ENST00000533069 TRAV41A0A0B4J266 112 aa13.03□□□□□ -0.32
PKP3-209ENST00000533069 PIGBOS1A0A0B4J2F0 54 aa13.03□□□□□ -0.32
PKP3-209ENST00000533069 M0R1X1 148 aa13.03□□□□□ -0.32
PKP3-209ENST00000533069 B3GALNT1O75752 331 aa13.03□□□□□ -0.32
PKP3-209ENST00000533069 CTSDP07339 412 aaPredicted RBP13.03□□□□□ -0.32
PKP3-209ENST00000533069 H2AFB2P0C5Z0 115 aa13.03□□□□□ -0.32
PKP3-209ENST00000533069 PGAM2P15259 253 aa13.03□□□□□ -0.32
PKP3-209ENST00000533069 PPIFP30405 207 aaKnown RBP13.03□□□□□ -0.32
PKP3-209ENST00000533069 TAGLNQ01995 201 aaKnown RBP13.03□□□□□ -0.32
PKP3-209ENST00000533069 C18orf65Q6ZTR6 163 aa13.03□□□□□ -0.32
PKP3-209ENST00000533069 CENPSQ8N2Z9 138 aa13.03□□□□□ -0.32
PKP3-209ENST00000533069 CCDC71LQ8N9Z2 235 aa13.03□□□□□ -0.32
PKP3-209ENST00000533069 OR13C8Q8NGS7 320 aa13.03□□□□□ -0.32
PKP3-209ENST00000533069 P2RX4Q99571 388 aa13.03□□□□□ -0.32
PKP3-209ENST00000533069 MCRIP2Q9BUT9 160 aaKnown RBP13.03□□□□□ -0.32
PKP3-209ENST00000533069 NUDT15Q9NV35 164 aa13.03□□□□□ -0.32
PKP3-209ENST00000533069 GPR132Q9UNW8 380 aa13.03□□□□□ -0.32
PKP3-209ENST00000533069 IGKV1-16P04430 117 aa13.02□□□□□ -0.33
PKP3-209ENST00000533069 CRIP2P52943 208 aaPredicted RBP13.02□□□□□ -0.33
PKP3-209ENST00000533069 TMEM65Q6PI78 240 aa13.02□□□□□ -0.33
PKP3-209ENST00000533069 TCTEX1D1Q8N7M0 179 aa13.02□□□□□ -0.33
PKP3-209ENST00000533069 MYOZ3Q8TDC0 251 aa13.02□□□□□ -0.33
PKP3-209ENST00000533069 FLYWCH2Q96CP2 140 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms