RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 CDK10Q15131 360 aa11.98□□□□□ -0.49
CPSF1-210ENST00000532935 DEFB136Q30KP8 78 aa11.98□□□□□ -0.49
CPSF1-210ENST00000532935 AKIRIN2Q53H80 203 aa11.98□□□□□ -0.49
CPSF1-210ENST00000532935 OSR1Q8TAX0 266 aaPredicted RBP11.98□□□□□ -0.49
CPSF1-210ENST00000532935 SECTM1Q8WVN6 248 aa11.98□□□□□ -0.49
CPSF1-210ENST00000532935 C4orf3Q8WVX3 66 aa11.98□□□□□ -0.49
CPSF1-210ENST00000532935 ARPC1AQ92747 370 aa11.98□□□□□ -0.49
CPSF1-210ENST00000532935 HSD17B10Q99714 261 aaKnown RBP11.98□□□□□ -0.49
CPSF1-210ENST00000532935 ANAPC10Q9UM13 185 aa11.98□□□□□ -0.49
CPSF1-210ENST00000532935 FOXA2Q9Y261 457 aaPredicted RBP11.98□□□□□ -0.49
CPSF1-210ENST00000532935 PRELID3BQ9Y3B1 194 aa11.98□□□□□ -0.49
CPSF1-210ENST00000532935 V9GYH0 126 aa11.98□□□□□ -0.49
CPSF1-210ENST00000532935 HPGDSO60760 199 aa11.97□□□□□ -0.49
CPSF1-210ENST00000532935 FCGR3BO75015 233 aa11.97□□□□□ -0.49
CPSF1-210ENST00000532935 CNIH1O95406 144 aa11.97□□□□□ -0.49
CPSF1-210ENST00000532935 PPYP01298 95 aa11.97□□□□□ -0.49
CPSF1-210ENST00000532935 ELK1P19419 428 aa11.97□□□□□ -0.49
CPSF1-210ENST00000532935 UBE2KP61086 200 aa11.97□□□□□ -0.49
CPSF1-210ENST00000532935 GNB1P62873 340 aa11.97□□□□□ -0.49
CPSF1-210ENST00000532935 RPL30P62888 115 aaKnown RBP11.97□□□□□ -0.49
CPSF1-210ENST00000532935 SSBP2P81877 361 aaPredicted RBP11.97□□□□□ -0.49
CPSF1-210ENST00000532935 PJVKQ0ZLH3 352 aa11.97□□□□□ -0.49
CPSF1-210ENST00000532935 VMA21Q3ZAQ7 101 aa11.97□□□□□ -0.49
CPSF1-210ENST00000532935 ACTBL2Q562R1 376 aa11.97□□□□□ -0.49
CPSF1-210ENST00000532935 OR2B11Q5JQS5 317 aa11.97□□□□□ -0.49
CPSF1-210ENST00000532935 UNQ5815/PRO19632Q6UWF5 114 aa11.97□□□□□ -0.49
CPSF1-210ENST00000532935 OVCH2Q7RTZ1 564 aa11.97□□□□□ -0.49
CPSF1-210ENST00000532935 ZNF491Q8N8L2 437 aa11.97□□□□□ -0.49
CPSF1-210ENST00000532935 LFNGQ8NES3 379 aa11.97□□□□□ -0.49
CPSF1-210ENST00000532935 GRPEL2Q8TAA5 225 aa11.97□□□□□ -0.49
CPSF1-210ENST00000532935 C15orf40Q8WUR7 153 aa11.97□□□□□ -0.49
CPSF1-210ENST00000532935 UBE2E2Q96LR5 201 aa11.97□□□□□ -0.49
CPSF1-210ENST00000532935 GNB4Q9HAV0 340 aa11.97□□□□□ -0.49
CPSF1-210ENST00000532935 VSIG4Q9Y279 399 aa11.97□□□□□ -0.49
CPSF1-210ENST00000532935 MRPS7Q9Y2R9 242 aaKnown RBP11.97□□□□□ -0.49
CPSF1-210ENST00000532935 DUS4LO95620 317 aaKnown RBP11.96□□□□□ -0.49
CPSF1-210ENST00000532935 NAT1P18440 290 aa11.96□□□□□ -0.49
CPSF1-210ENST00000532935 MSMO1Q15800 293 aa11.96□□□□□ -0.49
CPSF1-210ENST00000532935 RGS21Q2M5E4 152 aa11.96□□□□□ -0.49
CPSF1-210ENST00000532935 ZNF66Q6ZN08 573 aa11.96□□□□□ -0.49
CPSF1-210ENST00000532935 TEX45Q8NA69 505 aa11.96□□□□□ -0.49
CPSF1-210ENST00000532935 OR5M8Q8NGP6 311 aa11.96□□□□□ -0.49
CPSF1-210ENST00000532935 CASTOR1Q8WTX7 329 aa11.96□□□□□ -0.49
CPSF1-210ENST00000532935 TCTEX1D2Q8WW35 142 aa11.96□□□□□ -0.49
CPSF1-210ENST00000532935 GIMAP1Q8WWP7 306 aa11.96□□□□□ -0.49
CPSF1-210ENST00000532935 SRRQ9GZT4 340 aa11.96□□□□□ -0.49
CPSF1-210ENST00000532935 CCL28Q9NRJ3 127 aa11.96□□□□□ -0.49
CPSF1-210ENST00000532935 TAS2R8Q9NYW2 309 aa11.96□□□□□ -0.49
CPSF1-210ENST00000532935 EHFQ9NZC4 300 aa11.96□□□□□ -0.49
CPSF1-210ENST00000532935 FAM25AB3EWG3 89 aa11.95□□□□□ -0.5
CPSF1-210ENST00000532935 FAM25CB3EWG5 89 aa11.95□□□□□ -0.5
CPSF1-210ENST00000532935 FAM25GB3EWG6 89 aa11.95□□□□□ -0.5
CPSF1-210ENST00000532935 I3L521 148 aa11.95□□□□□ -0.5
CPSF1-210ENST00000532935 PRB2P02812 416 aaPredicted RBP11.95□□□□□ -0.5
CPSF1-210ENST00000532935 RAB25P57735 213 aa11.95□□□□□ -0.5
CPSF1-210ENST00000532935 TAS2R46P59540 309 aa11.95□□□□□ -0.5
CPSF1-210ENST00000532935 FXYD4P59646 89 aa11.95□□□□□ -0.5
CPSF1-210ENST00000532935 DEFA1P59665 94 aa11.95□□□□□ -0.5
CPSF1-210ENST00000532935 DEFA3P59666 94 aa11.95□□□□□ -0.5
CPSF1-210ENST00000532935 MRGPRG-AS1Q2M3A8 158 aa11.95□□□□□ -0.5
CPSF1-210ENST00000532935 PYHIN1Q6K0P9 492 aa11.95□□□□□ -0.5
CPSF1-210ENST00000532935 IDO2Q6ZQW0 420 aa11.95□□□□□ -0.5
CPSF1-210ENST00000532935 SNX29P2Q8IUI4 249 aa11.95□□□□□ -0.5
CPSF1-210ENST00000532935 OR4S2Q8NH73 311 aa11.95□□□□□ -0.5
CPSF1-210ENST00000532935 GPX8Q8TED1 209 aa11.95□□□□□ -0.5
CPSF1-210ENST00000532935 GPHA2Q96T91 129 aa11.95□□□□□ -0.5
CPSF1-210ENST00000532935 SLC5A7Q9GZV3 580 aa11.95□□□□□ -0.5
CPSF1-210ENST00000532935 TNFSF12O43508 249 aa11.94□□□□□ -0.5
CPSF1-210ENST00000532935 PMP2P02689 132 aa11.94□□□□□ -0.5
CPSF1-210ENST00000532935 SAA1P0DJI8 122 aaPredicted RBP11.94□□□□□ -0.5
CPSF1-210ENST00000532935 RFX2P48378 723 aa11.94□□□□□ -0.5
CPSF1-210ENST00000532935 HERV-K104P61576 105 aa11.94□□□□□ -0.5
CPSF1-210ENST00000532935 RUNX1Q01196 453 aa11.94□□□□□ -0.5
CPSF1-210ENST00000532935 DYRK1AQ13627 763 aa11.94□□□□□ -0.5
CPSF1-210ENST00000532935 ZNF79Q15937 498 aa11.94□□□□□ -0.5
CPSF1-210ENST00000532935 PRSS8Q16651 343 aa11.94□□□□□ -0.5
CPSF1-210ENST00000532935 ZBTB34Q8NCN2 500 aa11.94□□□□□ -0.5
CPSF1-210ENST00000532935 OR11H1Q8NG94 326 aa11.94□□□□□ -0.5
CPSF1-210ENST00000532935 OR5H2Q8NGV7 314 aa11.94□□□□□ -0.5
CPSF1-210ENST00000532935 OR5B12Q96R08 314 aa11.94□□□□□ -0.5
CPSF1-210ENST00000532935 SCPEP1Q9HB40 452 aa11.94□□□□□ -0.5
CPSF1-210ENST00000532935 EXTL2Q9UBQ6 330 aa11.94□□□□□ -0.5
CPSF1-210ENST00000532935 CTDSPLO15194 276 aa11.93□□□□□ -0.5
CPSF1-210ENST00000532935 KIR2DS2P43631 304 aa11.93□□□□□ -0.5
CPSF1-210ENST00000532935 BRWD1-AS2P59051 145 aa11.93□□□□□ -0.5
CPSF1-210ENST00000532935 FHL3Q13643 280 aa11.93□□□□□ -0.5
CPSF1-210ENST00000532935 DHRS11Q6UWP2 260 aa11.93□□□□□ -0.5
CPSF1-210ENST00000532935 REC114Q7Z4M0 266 aa11.93□□□□□ -0.5
CPSF1-210ENST00000532935 TMEM17Q86X19 198 aa11.93□□□□□ -0.5
CPSF1-210ENST00000532935 LYSMD2Q8IV50 215 aa11.93□□□□□ -0.5
CPSF1-210ENST00000532935 MS4A10Q96PG2 267 aa11.93□□□□□ -0.5
CPSF1-210ENST00000532935 SDHCQ99643 169 aaPredicted RBP11.93□□□□□ -0.5
CPSF1-210ENST00000532935 ZNF2Q9BSG1 426 aaPredicted RBP11.93□□□□□ -0.5
CPSF1-210ENST00000532935 MCRIP2Q9BUT9 160 aaKnown RBP11.93□□□□□ -0.5
CPSF1-210ENST00000532935 GPR61Q9BZJ8 451 aa11.93□□□□□ -0.5
CPSF1-210ENST00000532935 SULT1C2O00338 296 aa11.92□□□□□ -0.5
CPSF1-210ENST00000532935 HLA-DMAP28067 261 aa11.92□□□□□ -0.5
CPSF1-210ENST00000532935 HRH1P35367 487 aa11.92□□□□□ -0.5
CPSF1-210ENST00000532935 TPPP2P59282 170 aa11.92□□□□□ -0.5
CPSF1-210ENST00000532935 MRPS10P82664 201 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms