RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 PJVKQ0ZLH3 352 aa19.53■□□□□ 0.72
USP48-214ENST00000532737 MRGPRG-AS1Q2M3A8 158 aa19.53■□□□□ 0.72
USP48-214ENST00000532737 VMA21Q3ZAQ7 101 aa19.53■□□□□ 0.72
USP48-214ENST00000532737 ZNF329Q86UD4 541 aa19.53■□□□□ 0.72
USP48-214ENST00000532737 PPP1R27Q86WC6 154 aa19.53■□□□□ 0.72
USP48-214ENST00000532737 VKORC1L1Q8N0U8 176 aa19.53■□□□□ 0.72
USP48-214ENST00000532737 TOMM5Q8N4H5 51 aa19.53■□□□□ 0.72
USP48-214ENST00000532737 MARCH1Q8TCQ1 289 aa19.53■□□□□ 0.72
USP48-214ENST00000532737 CHPT1Q8WUD6 406 aa19.53■□□□□ 0.72
USP48-214ENST00000532737 HRASLSQ9HDD0 168 aa19.53■□□□□ 0.72
USP48-214ENST00000532737 PARP11Q9NR21 331 aa19.53■□□□□ 0.72
USP48-214ENST00000532737 PTTG2Q9NZH5 202 aa19.53■□□□□ 0.72
USP48-214ENST00000532737 PSMB11A5LHX3 300 aa19.52■□□□□ 0.72
USP48-214ENST00000532737 ATP6V0E1O15342 81 aa19.52■□□□□ 0.72
USP48-214ENST00000532737 FBXO24O75426 580 aa19.52■□□□□ 0.72
USP48-214ENST00000532737 SAA1P0DJI8 122 aaPredicted RBP19.52■□□□□ 0.72
USP48-214ENST00000532737 ZNF562Q6V9R5 426 aa19.52■□□□□ 0.72
USP48-214ENST00000532737 IDO2Q6ZQW0 420 aa19.52■□□□□ 0.72
USP48-214ENST00000532737 TBC1D26Q86UD7 250 aa19.52■□□□□ 0.72
USP48-214ENST00000532737 TEX45Q8NA69 505 aa19.52■□□□□ 0.72
USP48-214ENST00000532737 OR13C8Q8NGS7 320 aa19.52■□□□□ 0.72
USP48-214ENST00000532737 PRRT1Q99946 306 aa19.52■□□□□ 0.72
USP48-214ENST00000532737 SLC2A9Q9NRM0 540 aa19.52■□□□□ 0.72
USP48-214ENST00000532737 MCUBQ9NWR8 336 aa19.52■□□□□ 0.72
USP48-214ENST00000532737 FBXO7Q9Y3I1 522 aa19.52■□□□□ 0.72
USP48-214ENST00000532737 PLXNB1O43157 2135 aa19.52■□□□□ 0.72
USP48-214ENST00000532737 EGR2P11161 476 aaPredicted RBP19.51■□□□□ 0.71
USP48-214ENST00000532737 F2RP25116 425 aa19.51■□□□□ 0.71
USP48-214ENST00000532737 S100GP29377 79 aa19.51■□□□□ 0.71
USP48-214ENST00000532737 AP3S2P59780 193 aa19.51■□□□□ 0.71
USP48-214ENST00000532737 SSBP2P81877 361 aaPredicted RBP19.51■□□□□ 0.71
USP48-214ENST00000532737 TCTEX1D4Q5JR98 221 aa19.51■□□□□ 0.71
USP48-214ENST00000532737 POC5Q8NA72 575 aa19.51■□□□□ 0.71
USP48-214ENST00000532737 CD300LFQ8TDQ1 290 aa19.51■□□□□ 0.71
USP48-214ENST00000532737 ZNF486Q96H40 463 aaPredicted RBP19.51■□□□□ 0.71
USP48-214ENST00000532737 AKIP1Q9NQ31 210 aa19.51■□□□□ 0.71
USP48-214ENST00000532737 SLC2A8Q9NY64 477 aa19.51■□□□□ 0.71
USP48-214ENST00000532737 ZNF580Q9UK33 172 aa19.51■□□□□ 0.71
USP48-214ENST00000532737 WSB1Q9Y6I7 421 aa19.51■□□□□ 0.71
USP48-214ENST00000532737 ARPC1BO15143 372 aaKnown RBP19.5■□□□□ 0.71
USP48-214ENST00000532737 RND3P61587 244 aa19.5■□□□□ 0.71
USP48-214ENST00000532737 ZNF585BQ52M93 769 aa19.5■□□□□ 0.71
USP48-214ENST00000532737 LINC00299Q6ZSB3 139 aa19.5■□□□□ 0.71
USP48-214ENST00000532737 SGMS2Q8NHU3 365 aa19.5■□□□□ 0.71
USP48-214ENST00000532737 ZFAND1Q8TCF1 268 aa19.5■□□□□ 0.71
USP48-214ENST00000532737 S1PR2O95136 353 aa19.49■□□□□ 0.71
USP48-214ENST00000532737 HPRT1P00492 218 aa19.49■□□□□ 0.71
USP48-214ENST00000532737 HRASP01112 189 aa19.49■□□□□ 0.71
USP48-214ENST00000532737 CTSDP07339 412 aaPredicted RBP19.49■□□□□ 0.71
USP48-214ENST00000532737 LPAR6P43657 344 aa19.49■□□□□ 0.71
USP48-214ENST00000532737 PIGPP57054 158 aa19.49■□□□□ 0.71
USP48-214ENST00000532737 PRSS8Q16651 343 aa19.49■□□□□ 0.71
USP48-214ENST00000532737 ZNF57Q68EA5 555 aaPredicted RBP19.49■□□□□ 0.71
USP48-214ENST00000532737 RHOVQ96L33 236 aa19.49■□□□□ 0.71
USP48-214ENST00000532737 CITED2Q99967 270 aaPredicted RBP19.49■□□□□ 0.71
USP48-214ENST00000532737 PLEKHA2Q9HB19 425 aa19.49■□□□□ 0.71
USP48-214ENST00000532737 SCP2D1Q9UJQ7 156 aa19.49■□□□□ 0.71
USP48-214ENST00000532737 G3V318 75 aa19.48■□□□□ 0.71
USP48-214ENST00000532737 MPPED1O15442 326 aa19.48■□□□□ 0.71
USP48-214ENST00000532737 FAUP35544 74 aaKnown RBP19.48■□□□□ 0.71
USP48-214ENST00000532737 GNB1P62873 340 aa19.48■□□□□ 0.71
USP48-214ENST00000532737 SLC35B1P78383 322 aa19.48■□□□□ 0.71
USP48-214ENST00000532737 CD83Q01151 205 aa19.48■□□□□ 0.71
USP48-214ENST00000532737 CFHR3Q02985 330 aa19.48■□□□□ 0.71
USP48-214ENST00000532737 FXYD3Q14802 87 aa19.48■□□□□ 0.71
USP48-214ENST00000532737 TRIQKQ629K1 86 aa19.48■□□□□ 0.71
USP48-214ENST00000532737 SSX9Q7RTT3 188 aa19.48■□□□□ 0.71
USP48-214ENST00000532737 PUSL1Q8N0Z8 303 aaKnown RBP19.48■□□□□ 0.71
USP48-214ENST00000532737 TCTEX1D1Q8N7M0 179 aa19.48■□□□□ 0.71
USP48-214ENST00000532737 RTBDNQ9BSG5 229 aaPredicted RBP19.48■□□□□ 0.71
USP48-214ENST00000532737 FAM103A1Q9BTL3 118 aaKnown RBP19.48■□□□□ 0.71
USP48-214ENST00000532737 GPR132Q9UNW8 380 aa19.48■□□□□ 0.71
USP48-214ENST00000532737 TRAV41A0A0B4J266 112 aa19.47■□□□□ 0.71
USP48-214ENST00000532737 OR2A4O95047 310 aa19.47■□□□□ 0.71
USP48-214ENST00000532737 VDAC1P21796 283 aa19.47■□□□□ 0.71
USP48-214ENST00000532737 ECI1P42126 302 aa19.47■□□□□ 0.71
USP48-214ENST00000532737 TAS2R31P59538 309 aa19.47■□□□□ 0.71
USP48-214ENST00000532737 SURF2Q15527 256 aaPredicted RBP19.47■□□□□ 0.71
USP48-214ENST00000532737 ABHD5Q8WTS1 349 aa19.47■□□□□ 0.71
USP48-214ENST00000532737 ARPC1AQ92747 370 aa19.47■□□□□ 0.71
USP48-214ENST00000532737 OR2A7Q96R45 310 aa19.47■□□□□ 0.71
USP48-214ENST00000532737 GON7Q9BXV9 100 aa19.47■□□□□ 0.71
USP48-214ENST00000532737 ZNF430Q9H8G1 570 aaPredicted RBP19.47■□□□□ 0.71
USP48-214ENST00000532737 NUBP2Q9Y5Y2 271 aa19.47■□□□□ 0.71
USP48-214ENST00000532737 CNIH1O95406 144 aa19.46■□□□□ 0.71
USP48-214ENST00000532737 IL7P13232 177 aa19.46■□□□□ 0.71
USP48-214ENST00000532737 NQO2P16083 231 aa19.46■□□□□ 0.71
USP48-214ENST00000532737 CRIP2P52943 208 aaPredicted RBP19.46■□□□□ 0.71
USP48-214ENST00000532737 POU2AF1Q16633 256 aa19.46■□□□□ 0.71
USP48-214ENST00000532737 C19orf54Q5BKX5 351 aa19.46■□□□□ 0.71
USP48-214ENST00000532737 OR4X2Q8NGF9 303 aa19.46■□□□□ 0.71
USP48-214ENST00000532737 GRPEL2Q8TAA5 225 aa19.46■□□□□ 0.71
USP48-214ENST00000532737 TMEM167AQ8TBQ9 72 aa19.46■□□□□ 0.71
USP48-214ENST00000532737 DEDD2Q8WXF8 326 aa19.46■□□□□ 0.71
USP48-214ENST00000532737 C5orf66Q9H5L9 145 aa19.46■□□□□ 0.71
USP48-214ENST00000532737 COMMD9Q9P000 198 aa19.46■□□□□ 0.71
USP48-214ENST00000532737 COPZ2Q9P299 210 aa19.46■□□□□ 0.71
USP48-214ENST00000532737 RPA2P15927 270 aa19.45■□□□□ 0.7
USP48-214ENST00000532737 PPIFP30405 207 aaKnown RBP19.45■□□□□ 0.7
USP48-214ENST00000532737 INPP1P49441 399 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms