RNA–Protein interactions for RNA: ENST00000532461.5

RDX-213, Transcript of radixin, humanhuman

TSL 1 (best)

Gene RDX, Length 3,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-213ENST00000532461 ZNF788Q6ZQV5 615 aa4.78□□□□□ -1.64
RDX-213ENST00000532461 C1orf229Q6ZS94 237 aaPredicted RBP4.78□□□□□ -1.64
RDX-213ENST00000532461 NEUROG1Q92886 237 aa4.78□□□□□ -1.64
RDX-213ENST00000532461 C11orf52Q96A22 123 aa4.78□□□□□ -1.64
RDX-213ENST00000532461 OPN3Q9H1Y3 402 aaPredicted RBP4.78□□□□□ -1.64
RDX-213ENST00000532461 SLC39A9Q9NUM3 307 aa4.78□□□□□ -1.64
RDX-213ENST00000532461 USF3Q68DE3 2245 aa4.78□□□□□ -1.64
RDX-213ENST00000532461 INTS1Q8N201 2190 aaKnown RBP4.77□□□□□ -1.65
RDX-213ENST00000532461 TRAV9-1A0A075B6T8 112 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 ZNF729A6NN14 1252 aaPredicted RBP4.77□□□□□ -1.65
RDX-213ENST00000532461 CYB5BO43169 146 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 KRASP01116 189 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 STAG3L2P0CL84 134 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 STAG3L3P0CL85 134 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 FGF7P21781 194 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 GPR12P47775 334 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 GABRA2P47869 451 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 THBS3P49746 956 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 RAB11AP62491 216 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 LCN2P80188 198 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 TFF3Q07654 80 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 SRSF6Q13247 344 aaKnown RBP4.77□□□□□ -1.65
RDX-213ENST00000532461 FAM53AQ6NSI3 398 aaPredicted RBP4.77□□□□□ -1.65
RDX-213ENST00000532461 TREML4Q6UXN2 200 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 VASH2Q86V25 355 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 ZADH2Q8N4Q0 377 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 RNASE11Q8TAA1 199 aaKnown RBP4.77□□□□□ -1.65
RDX-213ENST00000532461 LHX4Q969G2 390 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 ZDHHC16Q969W1 377 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 BTF3L4Q96K17 158 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 FAM210BQ96KR6 192 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 GAFA1Q96PS6 74 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 ELOVL5Q9NYP7 299 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 DMRT1Q9Y5R6 373 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 DYSFO75923 2080 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 NPPCP23582 126 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 RPL29P47914 159 aaKnown RBP4.77□□□□□ -1.65
RDX-213ENST00000532461 ZNF137PP52743 207 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 KLF3P57682 345 aaPredicted RBP4.77□□□□□ -1.65
RDX-213ENST00000532461 PRR20EP86478 221 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 PRR20CP86479 221 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 PRR20DP86480 221 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 PRR20BP86481 221 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 PRR20AP86496 221 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 ZNF816Q0VGE8 651 aaPredicted RBP4.77□□□□□ -1.65
RDX-213ENST00000532461 FOXL1Q12952 345 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 FFAR4Q5NUL3 377 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 ZNF343Q6P1L6 599 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 SLC25A48Q6ZT89 311 aaKnown RBP4.77□□□□□ -1.65
RDX-213ENST00000532461 ZNF833PQ6ZTB9 187 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 PRR18Q8N4B5 295 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 CNEP1R1Q8N9A8 125 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 RAB24Q969Q5 203 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 MSL2Q9HCI7 577 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 GCM1Q9NP62 436 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 CALYQ9NYX4 217 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 ZNF835Q9Y2P0 537 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 A0A087X0M5 115 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 A0A1B0GX30 115 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 ST8SIA5O15466 376 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 FAM3BP58499 235 aaPredicted RBP4.77□□□□□ -1.65
RDX-213ENST00000532461 OR2B8PP59922 312 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 PAX2Q02962 417 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 MEF2CQ06413 473 aaPredicted RBP4.77□□□□□ -1.65
RDX-213ENST00000532461 KIAA0141Q14154 515 aaPredicted RBP4.77□□□□□ -1.65
RDX-213ENST00000532461 CT45A1Q5HYN5 189 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 ACTL10Q5JWF8 245 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 LCN15Q6UWW0 184 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 LINC00311Q8N616 119 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 OR4S2Q8NH73 311 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 CT45A3Q8NHU0 189 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 FAM57AQ8TBR7 257 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 ACY3Q96HD9 319 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 MGST2Q99735 147 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 PARLQ9H300 379 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 SLC25A10Q9UBX3 287 aaPredicted RBP4.77□□□□□ -1.65
RDX-213ENST00000532461 PSG11Q9UQ72 335 aa4.77□□□□□ -1.65
RDX-213ENST00000532461 ZFP92A6NM28 416 aa4.76□□□□□ -1.65
RDX-213ENST00000532461 HRASP01112 189 aa4.76□□□□□ -1.65
RDX-213ENST00000532461 CRYABP02511 175 aaKnown RBP4.76□□□□□ -1.65
RDX-213ENST00000532461 TDGF1P3P51864 188 aa4.76□□□□□ -1.65
RDX-213ENST00000532461 FGF8P55075 233 aaPredicted RBP4.76□□□□□ -1.65
RDX-213ENST00000532461 TLE1Q04724 770 aa4.76□□□□□ -1.65
RDX-213ENST00000532461 SPRNQ5BIV9 151 aa4.76□□□□□ -1.65
RDX-213ENST00000532461 SLC25A24Q6NUK1 477 aa4.76□□□□□ -1.65
RDX-213ENST00000532461 LRP11Q86VZ4 500 aa4.76□□□□□ -1.65
RDX-213ENST00000532461 RBMXL3Q8N7X1 1067 aaKnown RBP4.76□□□□□ -1.65
RDX-213ENST00000532461 OR5R1Q8NH85 324 aa4.76□□□□□ -1.65
RDX-213ENST00000532461 NEIL1Q96FI4 390 aaPredicted RBP4.76□□□□□ -1.65
RDX-213ENST00000532461 OR2V2Q96R30 315 aa4.76□□□□□ -1.65
RDX-213ENST00000532461 C19orf24Q9BVV8 132 aa4.76□□□□□ -1.65
RDX-213ENST00000532461 GGTLC1Q9BX51 225 aa4.76□□□□□ -1.65
RDX-213ENST00000532461 BET1LQ9NYM9 111 aa4.76□□□□□ -1.65
RDX-213ENST00000532461 PITPNC1Q9UKF7 332 aa4.76□□□□□ -1.65
RDX-213ENST00000532461 RBM7Q9Y580 266 aaKnown RBP4.76□□□□□ -1.65
RDX-213ENST00000532461 ZDBF2Q9HCK1 2354 aa4.76□□□□□ -1.65
RDX-213ENST00000532461 ZNF292O60281 2723 aa4.76□□□□□ -1.65
RDX-213ENST00000532461 A8MXE2 369 aa4.76□□□□□ -1.65
RDX-213ENST00000532461 PPP1R2P9O14990 202 aa4.76□□□□□ -1.65
RDX-213ENST00000532461 IGHV1-46P01743 117 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms