RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 SHOXO15266 292 aa10□□□□□ -0.81
COPB1-208ENST00000532088 FGF16O43320 207 aa10□□□□□ -0.81
COPB1-208ENST00000532088 HOXA3O43365 443 aaPredicted RBP10□□□□□ -0.81
COPB1-208ENST00000532088 FCGR3BO75015 233 aa10□□□□□ -0.81
COPB1-208ENST00000532088 IGHV4-59P01825 116 aa10□□□□□ -0.81
COPB1-208ENST00000532088 TMEM11P17152 192 aa10□□□□□ -0.81
COPB1-208ENST00000532088 UCP1P25874 307 aa10□□□□□ -0.81
COPB1-208ENST00000532088 PAX6P26367 422 aa10□□□□□ -0.81
COPB1-208ENST00000532088 BRWD1-AS2P59051 145 aa10□□□□□ -0.81
COPB1-208ENST00000532088 SRPXP78539 464 aa10□□□□□ -0.81
COPB1-208ENST00000532088 POU2AF1Q16633 256 aa10□□□□□ -0.81
COPB1-208ENST00000532088 RGS21Q2M5E4 152 aa10□□□□□ -0.81
COPB1-208ENST00000532088 Q8N3U1 123 aa10□□□□□ -0.81
COPB1-208ENST00000532088 MINDY2Q8NBR6 621 aa10□□□□□ -0.81
COPB1-208ENST00000532088 ADAD2Q8NCV1 583 aaKnown RBP10□□□□□ -0.81
COPB1-208ENST00000532088 NPBQ8NG41 125 aa10□□□□□ -0.81
COPB1-208ENST00000532088 OR51H1Q8NH63 302 aa10□□□□□ -0.81
COPB1-208ENST00000532088 RBM14Q96PK6 669 aaKnown RBP10□□□□□ -0.81
COPB1-208ENST00000532088 TSNAXQ99598 290 aaKnown RBP10□□□□□ -0.81
COPB1-208ENST00000532088 MARVELD1Q9BSK0 173 aa10□□□□□ -0.81
COPB1-208ENST00000532088 NUDT15Q9NV35 164 aa10□□□□□ -0.81
COPB1-208ENST00000532088 PRR13Q9NZ81 148 aa10□□□□□ -0.81
COPB1-208ENST00000532088 C1RLQ9NZP8 487 aa10□□□□□ -0.81
COPB1-208ENST00000532088 FN1P02751 2386 aaKnown RBP10□□□□□ -0.81
COPB1-208ENST00000532088 NSD1Q96L73 2696 aaPredicted RBP9.99□□□□□ -0.81
COPB1-208ENST00000532088 ARPC1BO15143 372 aaKnown RBP9.99□□□□□ -0.81
COPB1-208ENST00000532088 TCF21O43680 179 aa9.99□□□□□ -0.81
COPB1-208ENST00000532088 PEX14O75381 377 aa9.99□□□□□ -0.81
COPB1-208ENST00000532088 ATG12O94817 140 aa9.99□□□□□ -0.81
COPB1-208ENST00000532088 NDUFA3O95167 84 aa9.99□□□□□ -0.81
COPB1-208ENST00000532088 SFT2D2O95562 160 aa9.99□□□□□ -0.81
COPB1-208ENST00000532088 HRASP01112 189 aa9.99□□□□□ -0.81
COPB1-208ENST00000532088 IFNA2P01563 188 aa9.99□□□□□ -0.81
COPB1-208ENST00000532088 IGKV1-16P04430 117 aa9.99□□□□□ -0.81
COPB1-208ENST00000532088 FGF2P09038 288 aa9.99□□□□□ -0.81
COPB1-208ENST00000532088 AKR1C4P17516 323 aa9.99□□□□□ -0.81
COPB1-208ENST00000532088 LINC00205P59089 165 aa9.99□□□□□ -0.81
COPB1-208ENST00000532088 SLC9A3R2Q15599 337 aa9.99□□□□□ -0.81
COPB1-208ENST00000532088 ZNF585BQ52M93 769 aa9.99□□□□□ -0.81
COPB1-208ENST00000532088 TMED4Q7Z7H5 227 aa9.99□□□□□ -0.81
COPB1-208ENST00000532088 IL22RA2Q969J5 263 aa9.99□□□□□ -0.81
COPB1-208ENST00000532088 GPHA2Q96T91 129 aa9.99□□□□□ -0.81
COPB1-208ENST00000532088 FLVCR2Q9UPI3 526 aa9.99□□□□□ -0.81
COPB1-208ENST00000532088 DNAJC9-AS1A6NH13 148 aa9.98□□□□□ -0.81
COPB1-208ENST00000532088 PRAF2O60831 178 aa9.98□□□□□ -0.81
COPB1-208ENST00000532088 CRYZL1O95825 349 aa9.98□□□□□ -0.81
COPB1-208ENST00000532088 IL5P05113 134 aa9.98□□□□□ -0.81
COPB1-208ENST00000532088 SERPINE2P07093 398 aa9.98□□□□□ -0.81
COPB1-208ENST00000532088 RNASE1P07998 156 aaKnown RBP9.98□□□□□ -0.81
COPB1-208ENST00000532088 OR4E1P0C645 316 aa9.98□□□□□ -0.81
COPB1-208ENST00000532088 NQO2P16083 231 aa9.98□□□□□ -0.81
COPB1-208ENST00000532088 SUPT4H1P63272 117 aaKnown RBP9.98□□□□□ -0.81
COPB1-208ENST00000532088 HES1Q14469 280 aa9.98□□□□□ -0.81
COPB1-208ENST00000532088 CCBE1Q6UXH8 406 aaPredicted RBP9.98□□□□□ -0.81
COPB1-208ENST00000532088 LRTM2Q8N967 370 aa9.98□□□□□ -0.81
COPB1-208ENST00000532088 VSTM2AQ8TAG5 236 aa9.98□□□□□ -0.81
COPB1-208ENST00000532088 GLYATL2Q8WU03 294 aa9.98□□□□□ -0.81
COPB1-208ENST00000532088 HARBI1Q96MB7 349 aa9.98□□□□□ -0.81
COPB1-208ENST00000532088 TMEM56Q96MV1 263 aa9.98□□□□□ -0.81
COPB1-208ENST00000532088 TP53RKQ96S44 253 aa9.98□□□□□ -0.81
COPB1-208ENST00000532088 SLC25A33Q9BSK2 321 aa9.98□□□□□ -0.81
COPB1-208ENST00000532088 TMEM222Q9H0R3 208 aa9.98□□□□□ -0.81
COPB1-208ENST00000532088 PLSCR3Q9NRY6 295 aa9.98□□□□□ -0.81
COPB1-208ENST00000532088 MOB4Q9Y3A3 225 aa9.98□□□□□ -0.81
COPB1-208ENST00000532088 TMEM56-RWDD3S4R434 201 aa9.98□□□□□ -0.81
COPB1-208ENST00000532088 A0A0B4J2A0 478 aa9.97□□□□□ -0.81
COPB1-208ENST00000532088 DUXBA0A1W2PPF3 345 aa9.97□□□□□ -0.81
COPB1-208ENST00000532088 C9orf170A2RU37 121 aa9.97□□□□□ -0.81
COPB1-208ENST00000532088 INMT-MINDY4F8WBC2 141 aa9.97□□□□□ -0.81
COPB1-208ENST00000532088 NBR2O15453 112 aa9.97□□□□□ -0.81
COPB1-208ENST00000532088 RAMP3O60896 148 aa9.97□□□□□ -0.81
COPB1-208ENST00000532088 CDS2O95674 445 aa9.97□□□□□ -0.81
COPB1-208ENST00000532088 IGLV2-23P01705 113 aa9.97□□□□□ -0.81
COPB1-208ENST00000532088 OR5AC1P0C628 307 aa9.97□□□□□ -0.81
COPB1-208ENST00000532088 VSIG10L2P0DP72 767 aa9.97□□□□□ -0.81
COPB1-208ENST00000532088 UBE2KP61086 200 aa9.97□□□□□ -0.81
COPB1-208ENST00000532088 RPS16P62249 146 aaKnown RBP9.97□□□□□ -0.81
COPB1-208ENST00000532088 UBA52P62987 128 aaKnown RBP9.97□□□□□ -0.81
COPB1-208ENST00000532088 PPP1R1AQ13522 171 aa9.97□□□□□ -0.81
COPB1-208ENST00000532088 TMEM187Q14656 261 aa9.97□□□□□ -0.81
COPB1-208ENST00000532088 OXA1LQ15070 435 aa9.97□□□□□ -0.81
COPB1-208ENST00000532088 MMDQ15546 238 aa9.97□□□□□ -0.81
COPB1-208ENST00000532088 VMA21Q3ZAQ7 101 aa9.97□□□□□ -0.81
COPB1-208ENST00000532088 LYG2Q86SG7 212 aa9.97□□□□□ -0.81
COPB1-208ENST00000532088 TEX45Q8NA69 505 aa9.97□□□□□ -0.81
COPB1-208ENST00000532088 OR4A5Q8NH83 315 aa9.97□□□□□ -0.81
COPB1-208ENST00000532088 RANBP3Q9H6Z4 567 aaPredicted RBP9.97□□□□□ -0.81
COPB1-208ENST00000532088 ESM1Q9NQ30 184 aa9.97□□□□□ -0.81
COPB1-208ENST00000532088 KIAA1456Q9P272 454 aa9.97□□□□□ -0.81
COPB1-208ENST00000532088 SHPKQ9UHJ6 478 aa9.97□□□□□ -0.81
COPB1-208ENST00000532088 TRAV6A0A075B6T7 132 aa9.96□□□□□ -0.82
COPB1-208ENST00000532088 TRIM77I1YAP6 450 aa9.96□□□□□ -0.82
COPB1-208ENST00000532088 RRHO14718 337 aa9.96□□□□□ -0.82
COPB1-208ENST00000532088 CREBL2O60519 120 aaPredicted RBP9.96□□□□□ -0.82
COPB1-208ENST00000532088 DUS4LO95620 317 aaKnown RBP9.96□□□□□ -0.82
COPB1-208ENST00000532088 DHFRP00374 187 aa9.96□□□□□ -0.82
COPB1-208ENST00000532088 HLA-AP01891 365 aaKnown RBP9.96□□□□□ -0.82
COPB1-208ENST00000532088 CRYGBP07316 175 aa9.96□□□□□ -0.82
COPB1-208ENST00000532088 ANXA7P20073 488 aaKnown RBP9.96□□□□□ -0.82
COPB1-208ENST00000532088 CD24P25063 80 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms