RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 ZNF117Q03924 483 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 FOXF1Q12946 379 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 LGALS9BQ3B8N2 356 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 ACSM3Q53FZ2 586 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 FAM78BQ5VT40 261 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 LGALS9CQ6DKI2 356 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 PP632Q6XCG6 107 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 ZNF550Q7Z398 422 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 BAP18Q8IXM2 172 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 PACRGLQ8N7B6 248 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 UBL4BQ8N7F7 174 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 OR1M1Q8NGA1 313 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 OR8K1Q8NGG5 319 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 OR2D3Q8NGH3 330 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 FNDC9Q8TBE3 224 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 ASB17Q8WXJ9 295 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 ANKRD36BP1Q96IX9 119 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 AICDAQ9GZX7 198 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 MRPL16Q9NX20 251 aaKnown RBP1.42□□□□□ -2.18
CD44-234ENST00000531873 UNC13BO14795 1591 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 NUMA1Q14980 2115 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 RALGAPA2Q2PPJ7 1873 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 DISP2A7MBM2 1401 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 ARHGEF12Q9NZN5 1544 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 DOCK3Q8IZD9 2030 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 SDHAF1A6NFY7 115 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 C17orf51A8MQB3 221 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 G3V3Q6 166 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 KCNK1O00180 336 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 SLC17A3O00476 420 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 HLA-DQB2P05538 268 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 ATP6V0CP27449 155 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 CCR7P32248 378 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 RAB5BP61020 215 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 EMX1Q04741 257 aaPredicted RBP1.41□□□□□ -2.18
CD44-234ENST00000531873 PRDX4Q13162 271 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 PLPPR5Q32ZL2 321 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 TMEM176BQ3YBM2 270 aaPredicted RBP1.41□□□□□ -2.18
CD44-234ENST00000531873 KRTAP5-7Q6L8G8 165 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 C8orf74Q6P047 294 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 ZNF322Q6U7Q0 402 aaPredicted RBP1.41□□□□□ -2.18
CD44-234ENST00000531873 ALKAL1Q6UXT8 129 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 BRD3OSQ6XYD6 125 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 SPATA12Q7Z6I5 190 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 GPHB5Q86YW7 130 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 DAND5Q8N907 189 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 OR2T27Q8NH04 317 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 OR4K13Q8NH42 304 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 OR10A6Q8NH74 314 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 JOSD2Q8TAC2 188 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 C16orf78Q8WTQ4 265 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 ITFG2Q969R8 447 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 OPTNQ96CV9 577 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 SLC35G5Q96KT7 338 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 STACQ99469 402 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 MGLLQ99685 303 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 MRPS26Q9BYN8 205 aaKnown RBP1.41□□□□□ -2.18
CD44-234ENST00000531873 TAS2R9Q9NYW1 312 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 MCTS1Q9ULC4 181 aaKnown RBP1.41□□□□□ -2.18
CD44-234ENST00000531873 SNX12Q9UMY4 172 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 KLK5Q9Y337 293 aaPredicted RBP1.41□□□□□ -2.18
CD44-234ENST00000531873 COQ4Q9Y3A0 265 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 MINOS1-NBL1R4GNA1 71 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 A2MP01023 1474 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 MAGI2Q86UL8 1455 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 NEO1Q92859 1461 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 DOCK5Q9H7D0 1870 aa1.41□□□□□ -2.18
CD44-234ENST00000531873 ABCC5O15440 1437 aa1.4□□□□□ -2.18
CD44-234ENST00000531873 ZFYVE16Q7Z3T8 1539 aa1.4□□□□□ -2.18
CD44-234ENST00000531873 WDR90Q96KV7 1748 aa1.4□□□□□ -2.18
CD44-234ENST00000531873 SLX4Q8IY92 1834 aa1.4□□□□□ -2.18
CD44-234ENST00000531873 FASNP49327 2511 aaKnown RBP1.4□□□□□ -2.18
CD44-234ENST00000531873 ABCA12Q86UK0 2595 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 TRIOBPQ9H2D6 2365 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 NRKQ7Z2Y5 1582 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 POLA1P09884 1462 aaPredicted RBP1.4□□□□□ -2.19
CD44-234ENST00000531873 IGKV3D-11A0A0A0MRZ8 115 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 MDFIC2A0A1B0GVS7 189 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 VPS37CA5D8V6 355 aaPredicted RBP1.4□□□□□ -2.19
CD44-234ENST00000531873 OR5K4A6NMS3 321 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 ODF3BA8MYP8 253 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 C9JCJ5 164 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 E7EQL1 145 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 M0R036 132 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 TP53I11O14683 189 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 ZNF73O43830 326 aaPredicted RBP1.4□□□□□ -2.19
CD44-234ENST00000531873 IGKV4-1P06312 121 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 MYL12AP19105 171 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 CRHBPP24387 322 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 CDKN2CP42773 168 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 LPAR6P43657 344 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 MAP2K4P45985 399 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 RWDD2BP57060 319 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 TNFAIP6P98066 277 aaPredicted RBP1.4□□□□□ -2.19
CD44-234ENST00000531873 HOXC5Q00444 222 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 TNFRSF9Q07011 255 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 OR2F1Q13607 317 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 UAP1Q16222 522 aaPredicted RBP1.4□□□□□ -2.19
CD44-234ENST00000531873 AMTNQ6UX39 209 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 HIST2H3AQ71DI3 136 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms