RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 CCDC144AA2RUR9 1427 aa2.37□□□□□ -2.03
USP47-211ENST00000531513 WRNQ14191 1432 aaPredicted RBP eCLIP2.37□□□□□ -2.03
USP47-211ENST00000531513 A0A087WUJ7 227 aa2.37□□□□□ -2.03
USP47-211ENST00000531513 OR5K4A6NMS3 321 aa2.37□□□□□ -2.03
USP47-211ENST00000531513 TMEM238C9JI98 176 aa2.37□□□□□ -2.03
USP47-211ENST00000531513 LST1O00453 97 aa2.37□□□□□ -2.03
USP47-211ENST00000531513 BHLHE40O14503 412 aa2.37□□□□□ -2.03
USP47-211ENST00000531513 LY6HO94772 140 aa2.37□□□□□ -2.03
USP47-211ENST00000531513 CNIH1O95406 144 aa2.37□□□□□ -2.03
USP47-211ENST00000531513 FGF6P10767 208 aa2.37□□□□□ -2.03
USP47-211ENST00000531513 GZMMP51124 257 aa2.37□□□□□ -2.03
USP47-211ENST00000531513 TBPL1P62380 186 aa2.37□□□□□ -2.03
USP47-211ENST00000531513 FKBP1AP62942 108 aaKnown RBP2.37□□□□□ -2.03
USP47-211ENST00000531513 POU6F1Q14863 301 aa2.37□□□□□ -2.03
USP47-211ENST00000531513 CST6Q15828 149 aa2.37□□□□□ -2.03
USP47-211ENST00000531513 NOXRED1Q6NXP6 359 aa2.37□□□□□ -2.03
USP47-211ENST00000531513 WDR59Q6PJI9 974 aa2.37□□□□□ -2.03
USP47-211ENST00000531513 GPHB5Q86YW7 130 aa2.37□□□□□ -2.03
USP47-211ENST00000531513 OR6V1Q8N148 313 aa2.37□□□□□ -2.03
USP47-211ENST00000531513 RNASE6Q93091 150 aaKnown RBP2.37□□□□□ -2.03
USP47-211ENST00000531513 RAD51AP1Q96B01 352 aa2.37□□□□□ -2.03
USP47-211ENST00000531513 SFRP2Q96HF1 295 aa2.37□□□□□ -2.03
USP47-211ENST00000531513 IGF2BP2-AS1Q96M15 143 aa2.37□□□□□ -2.03
USP47-211ENST00000531513 CNBD2Q96M20 576 aa2.37□□□□□ -2.03
USP47-211ENST00000531513 PHB2Q99623 299 aa2.37□□□□□ -2.03
USP47-211ENST00000531513 MGLLQ99685 303 aa2.37□□□□□ -2.03
USP47-211ENST00000531513 DCSTAMPQ9H295 470 aa2.37□□□□□ -2.03
USP47-211ENST00000531513 SMDT1Q9H4I9 107 aa2.37□□□□□ -2.03
USP47-211ENST00000531513 GPR84Q9NQS5 396 aa2.37□□□□□ -2.03
USP47-211ENST00000531513 AK3Q9UIJ7 227 aa2.37□□□□□ -2.03
USP47-211ENST00000531513 PKIGQ9Y2B9 76 aa2.37□□□□□ -2.03
USP47-211ENST00000531513 ROCK1Q13464 1354 aa2.36□□□□□ -2.03
USP47-211ENST00000531513 CHD5Q8TDI0 1954 aa2.36□□□□□ -2.03
USP47-211ENST00000531513 LTBP4Q8N2S1 1624 aa2.36□□□□□ -2.03
USP47-211ENST00000531513 LOC102725191A0A1B0GVB3 256 aa2.36□□□□□ -2.03
USP47-211ENST00000531513 C9JCJ5 164 aa2.36□□□□□ -2.03
USP47-211ENST00000531513 UBE2L6O14933 153 aa2.36□□□□□ -2.03
USP47-211ENST00000531513 PSCAO43653 123 aa2.36□□□□□ -2.03
USP47-211ENST00000531513 NOS1APO75052 506 aaPredicted RBP2.36□□□□□ -2.03
USP47-211ENST00000531513 NDUFB2O95178 105 aa2.36□□□□□ -2.03
USP47-211ENST00000531513 RPSAP08865 295 aaKnown RBP2.36□□□□□ -2.03
USP47-211ENST00000531513 CCL3P10147 92 aa2.36□□□□□ -2.03
USP47-211ENST00000531513 HIST1H1TP22492 207 aaPredicted RBP2.36□□□□□ -2.03
USP47-211ENST00000531513 CRHBPP24387 322 aa2.36□□□□□ -2.03
USP47-211ENST00000531513 G0S2P27469 103 aa2.36□□□□□ -2.03
USP47-211ENST00000531513 RPL19P84098 196 aaKnown RBP2.36□□□□□ -2.03
USP47-211ENST00000531513 CAV1Q03135 178 aa2.36□□□□□ -2.03
USP47-211ENST00000531513 KRR1Q13601 381 aaKnown RBP2.36□□□□□ -2.03
USP47-211ENST00000531513 HTR4Q13639 388 aa2.36□□□□□ -2.03
USP47-211ENST00000531513 LGALS9BQ3B8N2 356 aa2.36□□□□□ -2.03
USP47-211ENST00000531513 DEFB134Q4QY38 66 aa2.36□□□□□ -2.03
USP47-211ENST00000531513 HACD4Q5VWC8 232 aa2.36□□□□□ -2.03
USP47-211ENST00000531513 TMEM42Q69YG0 159 aa2.36□□□□□ -2.03
USP47-211ENST00000531513 LGALS9CQ6DKI2 356 aa2.36□□□□□ -2.03
USP47-211ENST00000531513 C20orf196Q8IYI0 205 aa2.36□□□□□ -2.03
USP47-211ENST00000531513 DAND5Q8N907 189 aa2.36□□□□□ -2.03
USP47-211ENST00000531513 SGMS2Q8NHU3 365 aa2.36□□□□□ -2.03
USP47-211ENST00000531513 LMX1AQ8TE12 382 aa2.36□□□□□ -2.03
USP47-211ENST00000531513 FAM172AQ8WUF8 416 aa2.36□□□□□ -2.03
USP47-211ENST00000531513 PPP1R2P1Q96PQ5 205 aa2.36□□□□□ -2.03
USP47-211ENST00000531513 OR8B2Q96RD0 313 aa2.36□□□□□ -2.03
USP47-211ENST00000531513 NIPSNAP1Q9BPW8 284 aa2.36□□□□□ -2.03
USP47-211ENST00000531513 C16orf95Q9H693 158 aa2.36□□□□□ -2.03
USP47-211ENST00000531513 NMNAT1Q9HAN9 279 aaPredicted RBP2.36□□□□□ -2.03
USP47-211ENST00000531513 MRPL40Q9NQ50 206 aaKnown RBP2.36□□□□□ -2.03
USP47-211ENST00000531513 CMTM6Q9NX76 183 aa2.36□□□□□ -2.03
USP47-211ENST00000531513 ZNF391Q9UJN7 358 aa2.36□□□□□ -2.03
USP47-211ENST00000531513 ANGPT4Q9Y264 503 aa2.36□□□□□ -2.03
USP47-211ENST00000531513 CAMSAP1Q5T5Y3 1602 aa2.35□□□□□ -2.03
USP47-211ENST00000531513 DICER1Q9UPY3 1922 aaKnown RBP2.35□□□□□ -2.03
USP47-211ENST00000531513 SPRR5A0A1B0GTR4 108 aa2.35□□□□□ -2.03
USP47-211ENST00000531513 A0A1W2PQ67 120 aa2.35□□□□□ -2.03
USP47-211ENST00000531513 GRIFINA4D1Z8 144 aa2.35□□□□□ -2.03
USP47-211ENST00000531513 C19orf71A6NCJ1 209 aa2.35□□□□□ -2.03
USP47-211ENST00000531513 C17orf98A8MV24 154 aa2.35□□□□□ -2.03
USP47-211ENST00000531513 OR11H12B2RN74 326 aa2.35□□□□□ -2.03
USP47-211ENST00000531513 CST2P09228 141 aa2.35□□□□□ -2.03
USP47-211ENST00000531513 LPAR6P43657 344 aa2.35□□□□□ -2.03
USP47-211ENST00000531513 HIST1H3AP68431 136 aa2.35□□□□□ -2.03
USP47-211ENST00000531513 H3F3AP84243 136 aa2.35□□□□□ -2.03
USP47-211ENST00000531513 TAF1AQ15573 450 aaPredicted RBP2.35□□□□□ -2.03
USP47-211ENST00000531513 FAM229BQ4G0N7 80 aa2.35□□□□□ -2.03
USP47-211ENST00000531513 LIN52Q52LA3 116 aa2.35□□□□□ -2.03
USP47-211ENST00000531513 LPCAT3Q6P1A2 487 aa2.35□□□□□ -2.03
USP47-211ENST00000531513 SLC36A1Q7Z2H8 476 aa2.35□□□□□ -2.03
USP47-211ENST00000531513 SMIM15Q7Z3B0 74 aa2.35□□□□□ -2.03
USP47-211ENST00000531513 OR10X1Q8NGY0 326 aa2.35□□□□□ -2.03
USP47-211ENST00000531513 OR11H2Q8NH07 326 aa2.35□□□□□ -2.03
USP47-211ENST00000531513 RPS4Y2Q8TD47 263 aa2.35□□□□□ -2.03
USP47-211ENST00000531513 GPR119Q8TDV5 335 aa2.35□□□□□ -2.03
USP47-211ENST00000531513 ROPN1LQ96C74 230 aa2.35□□□□□ -2.03
USP47-211ENST00000531513 NMNAT3Q96T66 252 aa2.35□□□□□ -2.03
USP47-211ENST00000531513 HIGD2AQ9BW72 106 aa2.35□□□□□ -2.03
USP47-211ENST00000531513 TRIM4Q9C037 500 aa2.35□□□□□ -2.03
USP47-211ENST00000531513 MRPL27Q9P0M9 148 aaKnown RBP2.35□□□□□ -2.03
USP47-211ENST00000531513 DOK5Q9P104 306 aa2.35□□□□□ -2.03
USP47-211ENST00000531513 PRELID3BQ9Y3B1 194 aa2.35□□□□□ -2.03
USP47-211ENST00000531513 HEY1Q9Y5J3 304 aa2.35□□□□□ -2.03
USP47-211ENST00000531513 MTUS2Q5JR59 1369 aa2.35□□□□□ -2.03
USP47-211ENST00000531513 DHX57Q6P158 1386 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms