RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 H2BFWTQ7Z2G1 175 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 TBC1D26Q86UD7 250 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 SPAG16Q8N0X2 631 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 OR4D10Q8NGI6 311 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 OR5AN1Q8NGI8 311 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 CHPT1Q8WUD6 406 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 TAF15Q92804 592 aaKnown RBP eCLIP3.86□□□□□ -1.79
SSBP3-213ENST00000530618 IL22RA2Q969J5 263 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 AGMATQ9BSE5 352 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 GON7Q9BXV9 100 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 MRPL20Q9BYC9 149 aaKnown RBP3.86□□□□□ -1.79
SSBP3-213ENST00000530618 FXYD6Q9H0Q3 95 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 ALX4Q9H161 411 aaPredicted RBP3.86□□□□□ -1.79
SSBP3-213ENST00000530618 PLEKHA2Q9HB19 425 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 ENY2Q9NPA8 101 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 CCL28Q9NRJ3 127 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 ZFP57Q9NU63 452 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 ZNRD1Q9P1U0 126 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 VPREB3Q9UKI3 123 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 GPR132Q9UNW8 380 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 SOX21Q9Y651 276 aaPredicted RBP3.86□□□□□ -1.79
SSBP3-213ENST00000530618 DSCAML1Q8TD84 2053 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 EPPK1P58107 5090 aaKnown RBP3.85□□□□□ -1.79
SSBP3-213ENST00000530618 IGKV1D-13A0A0B4J2D9 117 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 A0A1W2PPI3 338 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 FAM90A9PA6NNJ1 464 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 SNRPGP15A8MWD9 76 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 INMT-MINDY4F8WBC2 141 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 H3BUX3 64 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 CLDN34H7C241 214 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 SLC31A2O15432 143 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 NBR2O15453 112 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 FGF16O43320 207 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 SSNA1O43805 119 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 SCGB2A1O75556 95 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 MED6O75586 246 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 OR2A4O95047 310 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 SCAF4O95104 1147 aaKnown RBP3.85□□□□□ -1.79
SSBP3-213ENST00000530618 CNIH1O95406 144 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 SFT2D2O95562 160 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 CRYZL1O95825 349 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 SNRNP70P08621 437 aaKnown RBP3.85□□□□□ -1.79
SSBP3-213ENST00000530618 OR4E1P0C645 316 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 PET100P0DJ07 73 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 IGKV1-13P0DP09 117 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 HKR1P10072 659 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 MAS1LP35410 378 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 CCR6P51684 374 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 ZNF134P52741 427 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 F2RL1P55085 397 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 RPP30P78346 268 aaKnown RBP3.85□□□□□ -1.79
SSBP3-213ENST00000530618 CYCSP99999 105 aaKnown RBP3.85□□□□□ -1.79
SSBP3-213ENST00000530618 TMEM267Q0VDI3 215 aaPredicted RBP3.85□□□□□ -1.79
SSBP3-213ENST00000530618 SMCO1Q147U7 214 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 DEFB112Q30KQ8 113 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 ZNF660Q6AZW8 331 aaPredicted RBP3.85□□□□□ -1.79
SSBP3-213ENST00000530618 HCP5Q6MZN7 132 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 Q6ZPA2 131 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 HSD17B13Q7Z5P4 300 aaPredicted RBP3.85□□□□□ -1.79
SSBP3-213ENST00000530618 LHFPL4Q7Z7J7 247 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 LYG2Q86SG7 212 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 NOXA1Q86UR1 476 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 SLC25A42Q86VD7 318 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 FOXRED2Q8IWF2 684 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 BCL6BQ8N143 479 aaPredicted RBP3.85□□□□□ -1.79
SSBP3-213ENST00000530618 TEX45Q8NA69 505 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 DUSP18Q8NEJ0 188 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 OR4A16Q8NH70 328 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 ABHD5Q8WTS1 349 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 CASTOR1Q8WTX7 329 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 ASB13Q8WXK3 278 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 RBPMSQ93062 196 aaKnown RBP3.85□□□□□ -1.79
SSBP3-213ENST00000530618 ST6GALNAC6Q969X2 333 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 GALNT14Q96FL9 552 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 AJUBAQ96IF1 538 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 RBM14Q96PK6 669 aaKnown RBP3.85□□□□□ -1.79
SSBP3-213ENST00000530618 OR2A7Q96R45 310 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 SDHCQ99643 169 aaPredicted RBP3.85□□□□□ -1.79
SSBP3-213ENST00000530618 NABP2Q9BQ15 211 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 SLC25A33Q9BSK2 321 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 ZNF747Q9BV97 191 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 PRSS22Q9GZN4 317 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 RANBP3Q9H6Z4 567 aaPredicted RBP3.85□□□□□ -1.79
SSBP3-213ENST00000530618 PRNDQ9UKY0 176 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 TBC1D24Q9ULP9 559 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 TCF19Q9Y242 345 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 BOLA1Q9Y3E2 137 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 TMED3Q9Y3Q3 217 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 PLXNB1O43157 2135 aa3.85□□□□□ -1.79
SSBP3-213ENST00000530618 TRAV6A0A075B6T7 132 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 A0A0B4J2A0 478 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 A0A1B0GUS0 222 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 A0A1W2PN81 502 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 MARCH11A6NNE9 402 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 LY6LH3BQJ8 138 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 WRBO00258 174 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 PLA2G10O15496 165 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 HOXA3O43365 443 aaPredicted RBP3.84□□□□□ -1.79
SSBP3-213ENST00000530618 DUS4LO95620 317 aaKnown RBP3.84□□□□□ -1.79
SSBP3-213ENST00000530618 IL5P05113 134 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms