RNA–Protein interactions for RNA: ENST00000530304.5

PCF11-203, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 1 (best)

Gene PCF11, Length 2,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-203ENST00000530304 TMEM170AQ8WVE7 144 aa16.15■□□□□ 0.18
PCF11-203ENST00000530304 FAM234AQ9H0X4 552 aa16.15■□□□□ 0.18
PCF11-203ENST00000530304 TUBG2Q9NRH3 451 aa16.15■□□□□ 0.18
PCF11-203ENST00000530304 GNG12Q9UBI6 72 aa16.15■□□□□ 0.18
PCF11-203ENST00000530304 PDE6DO43924 150 aa16.15■□□□□ 0.18
PCF11-203ENST00000530304 CD82P27701 267 aa16.15■□□□□ 0.18
PCF11-203ENST00000530304 CHRNA7P36544 502 aa16.15■□□□□ 0.18
PCF11-203ENST00000530304 ATP5G3P48201 142 aa16.15■□□□□ 0.18
PCF11-203ENST00000530304 PRAMEF5Q5TYX0 476 aa16.15■□□□□ 0.18
PCF11-203ENST00000530304 CST9LP1Q5W188 147 aa16.15■□□□□ 0.18
PCF11-203ENST00000530304 VKORC1L1Q8N0U8 176 aa16.15■□□□□ 0.18
PCF11-203ENST00000530304 OR4A16Q8NH70 328 aa16.15■□□□□ 0.18
PCF11-203ENST00000530304 OR5R1Q8NH85 324 aa16.15■□□□□ 0.18
PCF11-203ENST00000530304 RNASEH2CQ8TDP1 164 aaKnown RBP16.15■□□□□ 0.18
PCF11-203ENST00000530304 RAB1CQ92928 201 aa16.15■□□□□ 0.18
PCF11-203ENST00000530304 C14orf144Q96I85 54 aa16.15■□□□□ 0.18
PCF11-203ENST00000530304 LOXL4Q96JB6 756 aa16.15■□□□□ 0.18
PCF11-203ENST00000530304 DSPP15924 2871 aaKnown RBP16.15■□□□□ 0.18
PCF11-203ENST00000530304 A0A1W2PPV4 95 aa16.15■□□□□ 0.18
PCF11-203ENST00000530304 DVL1O14640 695 aa16.15■□□□□ 0.18
PCF11-203ENST00000530304 SPCS3P61009 180 aa16.15■□□□□ 0.18
PCF11-203ENST00000530304 JOSD1Q15040 202 aaPredicted RBP16.15■□□□□ 0.18
PCF11-203ENST00000530304 ACTL10Q5JWF8 245 aa16.15■□□□□ 0.18
PCF11-203ENST00000530304 MBNL2Q5VZF2 373 aaKnown RBP16.15■□□□□ 0.18
PCF11-203ENST00000530304 LINC01551Q86U37 167 aa16.15■□□□□ 0.18
PCF11-203ENST00000530304 FDCSPQ8NFU4 85 aa16.15■□□□□ 0.18
PCF11-203ENST00000530304 OR2Z1Q8NG97 314 aa16.15■□□□□ 0.18
PCF11-203ENST00000530304 Q8TCH9 128 aa16.15■□□□□ 0.18
PCF11-203ENST00000530304 TMEM37Q8WXS4 190 aa16.15■□□□□ 0.18
PCF11-203ENST00000530304 PRO1933Q9H354 126 aa16.15■□□□□ 0.18
PCF11-203ENST00000530304 PATZ1Q9HBE1 687 aaKnown RBP16.15■□□□□ 0.18
PCF11-203ENST00000530304 FUT9Q9Y231 359 aa16.15■□□□□ 0.18
PCF11-203ENST00000530304 HCFC1P51610 2035 aa16.14■□□□□ 0.17
PCF11-203ENST00000530304 IGHV2OR16-5A0A0B4J2B6 119 aa16.14■□□□□ 0.17
PCF11-203ENST00000530304 RRHO14718 337 aa16.14■□□□□ 0.17
PCF11-203ENST00000530304 NUBP1P53384 320 aa16.14■□□□□ 0.17
PCF11-203ENST00000530304 ACY3Q96HD9 319 aa16.14■□□□□ 0.17
PCF11-203ENST00000530304 AURKAIP1Q9NWT8 199 aaPredicted RBP16.14■□□□□ 0.17
PCF11-203ENST00000530304 IGKV1D-17A0A075B6S4 117 aa16.14■□□□□ 0.17
PCF11-203ENST00000530304 IGHV1-18A0A0C4DH31 117 aa16.14■□□□□ 0.17
PCF11-203ENST00000530304 FAM90A9PA6NNJ1 464 aa16.14■□□□□ 0.17
PCF11-203ENST00000530304 M0R1X1 148 aa16.14■□□□□ 0.17
PCF11-203ENST00000530304 NKX2-8O15522 239 aa16.14■□□□□ 0.17
PCF11-203ENST00000530304 GALR2O43603 387 aaPredicted RBP16.14■□□□□ 0.17
PCF11-203ENST00000530304 IGLV1-44P01699 117 aa16.14■□□□□ 0.17
PCF11-203ENST00000530304 IGHV3-13P01766 116 aa16.14■□□□□ 0.17
PCF11-203ENST00000530304 IGHV3-7P01780 117 aa16.14■□□□□ 0.17
PCF11-203ENST00000530304 RPP30P78346 268 aaKnown RBP16.14■□□□□ 0.17
PCF11-203ENST00000530304 TMEM249Q2WGJ8 235 aa16.14■□□□□ 0.17
PCF11-203ENST00000530304 RPL39P5Q59GN2 51 aa16.14■□□□□ 0.17
PCF11-203ENST00000530304 TREML4Q6UXN2 200 aa16.14■□□□□ 0.17
PCF11-203ENST00000530304 ASPMQ8IZT6 3477 aa16.14■□□□□ 0.17
PCF11-203ENST00000530304 TSTD3H0UI37 97 aa16.13■□□□□ 0.17
PCF11-203ENST00000530304 NDUFB4O95168 129 aa16.13■□□□□ 0.17
PCF11-203ENST00000530304 TYMSP04818 313 aa16.13■□□□□ 0.17
PCF11-203ENST00000530304 GZMBP10144 247 aa16.13■□□□□ 0.17
PCF11-203ENST00000530304 PDLIM4P50479 330 aa16.13■□□□□ 0.17
PCF11-203ENST00000530304 KCNIP4Q6PIL6 250 aa16.13■□□□□ 0.17
PCF11-203ENST00000530304 FAM90A1Q86YD7 464 aa16.13■□□□□ 0.17
PCF11-203ENST00000530304 MEGF10Q96KG7 1140 aa16.13■□□□□ 0.17
PCF11-203ENST00000530304 DERL1Q9BUN8 251 aa16.13■□□□□ 0.17
PCF11-203ENST00000530304 HEYLQ9NQ87 328 aaPredicted RBP16.13■□□□□ 0.17
PCF11-203ENST00000530304 DUSP13Q9UII6 198 aa16.13■□□□□ 0.17
PCF11-203ENST00000530304 JPT1Q9UK76 154 aa16.13■□□□□ 0.17
PCF11-203ENST00000530304 DDTP30046 118 aa16.13■□□□□ 0.17
PCF11-203ENST00000530304 ZNF134P52741 427 aa16.13■□□□□ 0.17
PCF11-203ENST00000530304 CISD2Q8N5K1 135 aaKnown RBP16.13■□□□□ 0.17
PCF11-203ENST00000530304 KCNIP2Q9NS61 270 aa16.13■□□□□ 0.17
PCF11-203ENST00000530304 YPEL1O60688 119 aa16.12■□□□□ 0.17
PCF11-203ENST00000530304 MPDU1O75352 247 aa16.12■□□□□ 0.17
PCF11-203ENST00000530304 OPRK1P41145 380 aa16.12■□□□□ 0.17
PCF11-203ENST00000530304 VDAC2P45880 294 aaPredicted RBP16.12■□□□□ 0.17
PCF11-203ENST00000530304 SRSF6Q13247 344 aaKnown RBP16.12■□□□□ 0.17
PCF11-203ENST00000530304 YPEL2Q96QA6 119 aa16.12■□□□□ 0.17
PCF11-203ENST00000530304 TRAV3A0A0B4J244 114 aa16.12■□□□□ 0.17
PCF11-203ENST00000530304 A0A1B0GWJ7 208 aa16.12■□□□□ 0.17
PCF11-203ENST00000530304 AQP7O14520 342 aa16.12■□□□□ 0.17
PCF11-203ENST00000530304 TMPRSS2O15393 492 aa16.12■□□□□ 0.17
PCF11-203ENST00000530304 PRSS8Q16651 343 aa16.12■□□□□ 0.17
PCF11-203ENST00000530304 FAM78BQ5VT40 261 aa16.12■□□□□ 0.17
PCF11-203ENST00000530304 OR52E5Q8NH55 327 aa16.12■□□□□ 0.17
PCF11-203ENST00000530304 MGST2Q99735 147 aa16.12■□□□□ 0.17
PCF11-203ENST00000530304 MS4A5Q9H3V2 200 aa16.12■□□□□ 0.17
PCF11-203ENST00000530304 PLSCR4Q9NRQ2 329 aa16.12■□□□□ 0.17
PCF11-203ENST00000530304 SRRM5B3KS81 715 aa16.11■□□□□ 0.17
PCF11-203ENST00000530304 SOX15O60248 233 aa16.11■□□□□ 0.17
PCF11-203ENST00000530304 LOXL3P58215 753 aa16.11■□□□□ 0.17
PCF11-203ENST00000530304 MZT1Q08AG7 82 aa16.11■□□□□ 0.17
PCF11-203ENST00000530304 UNQ6494/PRO21346Q6UXR6 183 aa16.11■□□□□ 0.17
PCF11-203ENST00000530304 ABHD12Q8N2K0 398 aa16.11■□□□□ 0.17
PCF11-203ENST00000530304 SDSLQ96GA7 329 aa16.11■□□□□ 0.17
PCF11-203ENST00000530304 HEATR1Q9H583 2144 aaKnown RBP16.11■□□□□ 0.17
PCF11-203ENST00000530304 ZFHX4Q86UP3 3567 aa16.11■□□□□ 0.17
PCF11-203ENST00000530304 IGHV3OR15-7A0A075B7D8 119 aa16.11■□□□□ 0.17
PCF11-203ENST00000530304 PRR33A8MZF0 331 aa16.11■□□□□ 0.17
PCF11-203ENST00000530304 PRSS46E5RG02 174 aa16.11■□□□□ 0.17
PCF11-203ENST00000530304 M0R296 226 aa16.11■□□□□ 0.17
PCF11-203ENST00000530304 GFRA3O60609 400 aa16.11■□□□□ 0.17
PCF11-203ENST00000530304 ERVK-16P61578 105 aa16.11■□□□□ 0.17
PCF11-203ENST00000530304 RELBQ01201 579 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms