RNA–Protein interactions for RNA: ENST00000528462.5

PACSIN3-205, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 1,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-205ENST00000528462 VPREB3Q9UKI3 123 aa17.59■□□□□ 0.41
PACSIN3-205ENST00000528462 SRRM4A7MD48 611 aaKnown RBP17.58■□□□□ 0.41
PACSIN3-205ENST00000528462 SNRPGP15A8MWD9 76 aa17.58■□□□□ 0.41
PACSIN3-205ENST00000528462 OR2F2O95006 317 aa17.58■□□□□ 0.41
PACSIN3-205ENST00000528462 HRASP01112 189 aa17.58■□□□□ 0.41
PACSIN3-205ENST00000528462 IGKV1-39P01597 117 aa17.58■□□□□ 0.41
PACSIN3-205ENST00000528462 IGKV1D-39P04432 117 aa17.58■□□□□ 0.41
PACSIN3-205ENST00000528462 NQO2P16083 231 aa17.58■□□□□ 0.41
PACSIN3-205ENST00000528462 SLC9A3R2Q15599 337 aa17.58■□□□□ 0.41
PACSIN3-205ENST00000528462 ZNF431Q8TF32 576 aaPredicted RBP17.58■□□□□ 0.41
PACSIN3-205ENST00000528462 RBPMSQ93062 196 aaKnown RBP17.58■□□□□ 0.41
PACSIN3-205ENST00000528462 RHOVQ96L33 236 aa17.58■□□□□ 0.41
PACSIN3-205ENST00000528462 GPN1Q9HCN4 374 aaPredicted RBP17.58■□□□□ 0.41
PACSIN3-205ENST00000528462 PLSCR3Q9NRY6 295 aa17.58■□□□□ 0.41
PACSIN3-205ENST00000528462 A0A0A6YYJ9 748 aa17.57■□□□□ 0.4
PACSIN3-205ENST00000528462 A0A0B4J2A0 478 aa17.57■□□□□ 0.4
PACSIN3-205ENST00000528462 C7orf66A4D0T2 115 aa17.57■□□□□ 0.4
PACSIN3-205ENST00000528462 NDUFA3O95167 84 aa17.57■□□□□ 0.4
PACSIN3-205ENST00000528462 IGLV2-23P01705 113 aa17.57■□□□□ 0.4
PACSIN3-205ENST00000528462 HILS1P60008 231 aa17.57■□□□□ 0.4
PACSIN3-205ENST00000528462 HNF4GQ14541 408 aa17.57■□□□□ 0.4
PACSIN3-205ENST00000528462 TATDN3Q17R31 274 aa17.57■□□□□ 0.4
PACSIN3-205ENST00000528462 ANKRD55Q3KP44 614 aa17.57■□□□□ 0.4
PACSIN3-205ENST00000528462 LGI3Q8N145 548 aa17.57■□□□□ 0.4
PACSIN3-205ENST00000528462 LHFPL5Q8TAF8 219 aa17.57■□□□□ 0.4
PACSIN3-205ENST00000528462 RBMXL1Q96E39 390 aaKnown RBP17.57■□□□□ 0.4
PACSIN3-205ENST00000528462 C1RLQ9NZP8 487 aa17.57■□□□□ 0.4
PACSIN3-205ENST00000528462 SHPKQ9UHJ6 478 aa17.57■□□□□ 0.4
PACSIN3-205ENST00000528462 MARCH11A6NNE9 402 aa17.57■□□□□ 0.4
PACSIN3-205ENST00000528462 ATG12O94817 140 aa17.57■□□□□ 0.4
PACSIN3-205ENST00000528462 CASTOR1Q8WTX7 329 aa17.57■□□□□ 0.4
PACSIN3-205ENST00000528462 SEC22AQ96IW7 307 aa17.57■□□□□ 0.4
PACSIN3-205ENST00000528462 SEC22CQ9BRL7 303 aa17.57■□□□□ 0.4
PACSIN3-205ENST00000528462 CUBNO60494 3623 aa17.56■□□□□ 0.4
PACSIN3-205ENST00000528462 JMJD1CQ15652 2540 aa17.56■□□□□ 0.4
PACSIN3-205ENST00000528462 NF1P21359 2839 aa17.56■□□□□ 0.4
PACSIN3-205ENST00000528462 A0A0B4J293 547 aa17.56■□□□□ 0.4
PACSIN3-205ENST00000528462 NBR2O15453 112 aa17.56■□□□□ 0.4
PACSIN3-205ENST00000528462 UBE2KP61086 200 aa17.56■□□□□ 0.4
PACSIN3-205ENST00000528462 MMDQ15546 238 aa17.56■□□□□ 0.4
PACSIN3-205ENST00000528462 ZNF695Q8IW36 515 aa17.56■□□□□ 0.4
PACSIN3-205ENST00000528462 SELENOHQ8IZQ5 122 aaKnown RBP17.56■□□□□ 0.4
PACSIN3-205ENST00000528462 OR52B4Q8NGK2 314 aa17.56■□□□□ 0.4
PACSIN3-205ENST00000528462 COQ8AQ8NI60 647 aa17.56■□□□□ 0.4
PACSIN3-205ENST00000528462 R3HDM4Q96D70 268 aa17.56■□□□□ 0.4
PACSIN3-205ENST00000528462 JMJD8Q96S16 334 aa17.56■□□□□ 0.4
PACSIN3-205ENST00000528462 PHB2Q99623 299 aa17.56■□□□□ 0.4
PACSIN3-205ENST00000528462 DUXBA0A1W2PPF3 345 aa17.55■□□□□ 0.4
PACSIN3-205ENST00000528462 M0QZK8 103 aa17.55■□□□□ 0.4
PACSIN3-205ENST00000528462 FGF16O43320 207 aa17.55■□□□□ 0.4
PACSIN3-205ENST00000528462 CREBL2O60519 120 aaPredicted RBP17.55■□□□□ 0.4
PACSIN3-205ENST00000528462 F2RL1P55085 397 aa17.55■□□□□ 0.4
PACSIN3-205ENST00000528462 PSG5Q15238 335 aa17.55■□□□□ 0.4
PACSIN3-205ENST00000528462 TMEM268Q5VZI3 342 aa17.55■□□□□ 0.4
PACSIN3-205ENST00000528462 FAM71E2Q8N5Q1 922 aa17.55■□□□□ 0.4
PACSIN3-205ENST00000528462 VSTM2AQ8TAG5 236 aa17.55■□□□□ 0.4
PACSIN3-205ENST00000528462 SLC25A33Q9BSK2 321 aa17.55■□□□□ 0.4
PACSIN3-205ENST00000528462 RAB18Q9NP72 206 aa17.55■□□□□ 0.4
PACSIN3-205ENST00000528462 SETD2Q9BYW2 2564 aaPredicted RBP17.54■□□□□ 0.4
PACSIN3-205ENST00000528462 DNAJC9-AS1A6NH13 148 aa17.54■□□□□ 0.4
PACSIN3-205ENST00000528462 RRHO14718 337 aa17.54■□□□□ 0.4
PACSIN3-205ENST00000528462 KRASP01116 189 aa17.54■□□□□ 0.4
PACSIN3-205ENST00000528462 IL6RP08887 468 aaPredicted RBP17.54■□□□□ 0.4
PACSIN3-205ENST00000528462 FGF2P09038 288 aa17.54■□□□□ 0.4
PACSIN3-205ENST00000528462 ERVK-16P61578 105 aa17.54■□□□□ 0.4
PACSIN3-205ENST00000528462 LY6EQ16553 131 aa17.54■□□□□ 0.4
PACSIN3-205ENST00000528462 VMA21Q3ZAQ7 101 aa17.54■□□□□ 0.4
PACSIN3-205ENST00000528462 TMEM219Q86XT9 240 aa17.54■□□□□ 0.4
PACSIN3-205ENST00000528462 TEX45Q8NA69 505 aa17.54■□□□□ 0.4
PACSIN3-205ENST00000528462 CHIAQ9BZP6 476 aa17.54■□□□□ 0.4
PACSIN3-205ENST00000528462 ESM1Q9NQ30 184 aa17.54■□□□□ 0.4
PACSIN3-205ENST00000528462 KIAA1456Q9P272 454 aa17.54■□□□□ 0.4
PACSIN3-205ENST00000528462 MOB4Q9Y3A3 225 aa17.54■□□□□ 0.4
PACSIN3-205ENST00000528462 DBX1A6NMT0 343 aa17.53■□□□□ 0.4
PACSIN3-205ENST00000528462 CRYGBP07316 175 aa17.53■□□□□ 0.4
PACSIN3-205ENST00000528462 P0C879 139 aa17.53■□□□□ 0.4
PACSIN3-205ENST00000528462 SAA1P0DJI8 122 aaPredicted RBP17.53■□□□□ 0.4
PACSIN3-205ENST00000528462 VDAC1P21796 283 aa17.53■□□□□ 0.4
PACSIN3-205ENST00000528462 CNTFRP26992 372 aa17.53■□□□□ 0.4
PACSIN3-205ENST00000528462 FAM219AQ8IW50 185 aa17.53■□□□□ 0.4
PACSIN3-205ENST00000528462 VKORC1L1Q8N0U8 176 aa17.53■□□□□ 0.4
PACSIN3-205ENST00000528462 PUSL1Q8N0Z8 303 aaKnown RBP17.53■□□□□ 0.4
PACSIN3-205ENST00000528462 SLC35G3Q8N808 338 aa17.53■□□□□ 0.4
PACSIN3-205ENST00000528462 LSM10Q969L4 123 aaKnown RBP17.53■□□□□ 0.4
PACSIN3-205ENST00000528462 BET1LQ9NYM9 111 aa17.53■□□□□ 0.4
PACSIN3-205ENST00000528462 PRR13Q9NZ81 148 aa17.53■□□□□ 0.4
PACSIN3-205ENST00000528462 SLC25A17O43808 307 aa17.53■□□□□ 0.4
PACSIN3-205ENST00000528462 IGKV1-5P01602 117 aa17.53■□□□□ 0.4
PACSIN3-205ENST00000528462 G6PCP35575 357 aa17.53■□□□□ 0.4
PACSIN3-205ENST00000528462 C5orf64Q2M2E5 130 aa17.53■□□□□ 0.4
PACSIN3-205ENST00000528462 OR4A47Q6IF82 309 aa17.53■□□□□ 0.4
PACSIN3-205ENST00000528462 C12orf45Q8N5I9 185 aaPredicted RBP17.53■□□□□ 0.4
PACSIN3-205ENST00000528462 Q8N9W7 124 aa17.53■□□□□ 0.4
PACSIN3-205ENST00000528462 SIGLEC9Q9Y336 463 aa17.53■□□□□ 0.4
PACSIN3-205ENST00000528462 TNCP24821 2201 aa17.53■□□□□ 0.4
PACSIN3-205ENST00000528462 NCBP2LA6PVI3 153 aaKnown RBP17.52■□□□□ 0.39
PACSIN3-205ENST00000528462 CHST1O43916 411 aa17.52■□□□□ 0.39
PACSIN3-205ENST00000528462 OR2A4O95047 310 aa17.52■□□□□ 0.39
PACSIN3-205ENST00000528462 AKR1C2P52895 323 aa17.52■□□□□ 0.39
PACSIN3-205ENST00000528462 LYZL2Q7Z4W2 148 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms