RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 SNX29P2Q8IUI4 249 aa11.02□□□□□ -0.65
CAPN1-212ENST00000527887 TOMM5Q8N4H5 51 aa11.02□□□□□ -0.65
CAPN1-212ENST00000527887 DUSP18Q8NEJ0 188 aa11.02□□□□□ -0.65
CAPN1-212ENST00000527887 FLYWCH2Q96CP2 140 aaKnown RBP11.02□□□□□ -0.65
CAPN1-212ENST00000527887 RAB3CQ96E17 227 aa11.02□□□□□ -0.65
CAPN1-212ENST00000527887 PARP12Q9H0J9 701 aaKnown RBP11.02□□□□□ -0.65
CAPN1-212ENST00000527887 SLA2Q9H6Q3 261 aa11.02□□□□□ -0.65
CAPN1-212ENST00000527887 RDH8Q9NYR8 311 aa11.02□□□□□ -0.65
CAPN1-212ENST00000527887 ANKRD20A5PA0PJZ0 165 aa11.01□□□□□ -0.65
CAPN1-212ENST00000527887 FABP7O15540 132 aa11.01□□□□□ -0.65
CAPN1-212ENST00000527887 PROP1O75360 226 aa11.01□□□□□ -0.65
CAPN1-212ENST00000527887 HIST1H1DP16402 221 aaKnown RBP11.01□□□□□ -0.65
CAPN1-212ENST00000527887 LGALS7P47929 136 aa11.01□□□□□ -0.65
CAPN1-212ENST00000527887 NDPQ00604 133 aa11.01□□□□□ -0.65
CAPN1-212ENST00000527887 ECSCRQ19T08 205 aa11.01□□□□□ -0.65
CAPN1-212ENST00000527887 CDNFQ49AH0 187 aa11.01□□□□□ -0.65
CAPN1-212ENST00000527887 ACTBL2Q562R1 376 aa11.01□□□□□ -0.65
CAPN1-212ENST00000527887 PPP1R27Q86WC6 154 aa11.01□□□□□ -0.65
CAPN1-212ENST00000527887 CENPSQ8N2Z9 138 aa11.01□□□□□ -0.65
CAPN1-212ENST00000527887 OR52I2Q8NH67 350 aa11.01□□□□□ -0.65
CAPN1-212ENST00000527887 COPZ2Q9P299 210 aa11.01□□□□□ -0.65
CAPN1-212ENST00000527887 METTL1Q9UBP6 276 aaKnown RBP11.01□□□□□ -0.65
CAPN1-212ENST00000527887 ZNF256Q9Y2P7 627 aaPredicted RBP11.01□□□□□ -0.65
CAPN1-212ENST00000527887 IGKV1-6A0A0C4DH72 117 aa11□□□□□ -0.65
CAPN1-212ENST00000527887 LINC01619G3V211 115 aa11□□□□□ -0.65
CAPN1-212ENST00000527887 FCN1O00602 326 aa11□□□□□ -0.65
CAPN1-212ENST00000527887 OVOL1O14753 267 aa11□□□□□ -0.65
CAPN1-212ENST00000527887 LYRM1O43325 122 aa11□□□□□ -0.65
CAPN1-212ENST00000527887 SOX15O60248 233 aa11□□□□□ -0.65
CAPN1-212ENST00000527887 LGALS1P09382 135 aaKnown RBP11□□□□□ -0.65
CAPN1-212ENST00000527887 EGR2P11161 476 aaPredicted RBP11□□□□□ -0.65
CAPN1-212ENST00000527887 TBPP20226 339 aa11□□□□□ -0.65
CAPN1-212ENST00000527887 FAUP35544 74 aaKnown RBP11□□□□□ -0.65
CAPN1-212ENST00000527887 RPS16P62249 146 aaKnown RBP11□□□□□ -0.65
CAPN1-212ENST00000527887 GNB1P62873 340 aa11□□□□□ -0.65
CAPN1-212ENST00000527887 KLF9Q13886 244 aaPredicted RBP11□□□□□ -0.65
CAPN1-212ENST00000527887 ASPHD1Q5U4P2 390 aa11□□□□□ -0.65
CAPN1-212ENST00000527887 ZNF57Q68EA5 555 aaPredicted RBP11□□□□□ -0.65
CAPN1-212ENST00000527887 Q6ZS49 121 aa11□□□□□ -0.65
CAPN1-212ENST00000527887 ZNF383Q8NA42 475 aa11□□□□□ -0.65
CAPN1-212ENST00000527887 OR10J5Q8NHC4 309 aa11□□□□□ -0.65
CAPN1-212ENST00000527887 ABHD5Q8WTS1 349 aa11□□□□□ -0.65
CAPN1-212ENST00000527887 TMEM68Q96MH6 324 aa11□□□□□ -0.65
CAPN1-212ENST00000527887 WWC2-AS2Q96NR7 200 aa11□□□□□ -0.65
CAPN1-212ENST00000527887 CABLES2Q9BTV7 478 aa11□□□□□ -0.65
CAPN1-212ENST00000527887 FBXO7Q9Y3I1 522 aa11□□□□□ -0.65
CAPN1-212ENST00000527887 TRBV6-7A0A0A0MS04 114 aa10.99□□□□□ -0.65
CAPN1-212ENST00000527887 H3BUA1 57 aa10.99□□□□□ -0.65
CAPN1-212ENST00000527887 MFNGO00587 321 aa10.99□□□□□ -0.65
CAPN1-212ENST00000527887 IGKV1-16P04430 117 aa10.99□□□□□ -0.65
CAPN1-212ENST00000527887 HSPB1P04792 205 aaKnown RBP10.99□□□□□ -0.65
CAPN1-212ENST00000527887 FCGR3AP08637 254 aa10.99□□□□□ -0.65
CAPN1-212ENST00000527887 RRASP10301 218 aa10.99□□□□□ -0.65
CAPN1-212ENST00000527887 RCVRNP35243 200 aa10.99□□□□□ -0.65
CAPN1-212ENST00000527887 CBX3Q13185 183 aa10.99□□□□□ -0.65
CAPN1-212ENST00000527887 MOGAT2Q3SYC2 334 aa10.99□□□□□ -0.65
CAPN1-212ENST00000527887 C11orf87Q6NUJ2 197 aa10.99□□□□□ -0.65
CAPN1-212ENST00000527887 UNQ5815/PRO19632Q6UWF5 114 aa10.99□□□□□ -0.65
CAPN1-212ENST00000527887 TMEM229BQ8NBD8 167 aa10.99□□□□□ -0.65
CAPN1-212ENST00000527887 DRAXINQ8NBI3 349 aaPredicted RBP10.99□□□□□ -0.65
CAPN1-212ENST00000527887 LFNGQ8NES3 379 aa10.99□□□□□ -0.65
CAPN1-212ENST00000527887 DCUN1D4Q92564 292 aa10.99□□□□□ -0.65
CAPN1-212ENST00000527887 RHOVQ96L33 236 aa10.99□□□□□ -0.65
CAPN1-212ENST00000527887 OR5B12Q96R08 314 aa10.99□□□□□ -0.65
CAPN1-212ENST00000527887 TPSG1Q9NRR2 321 aa10.99□□□□□ -0.65
CAPN1-212ENST00000527887 SLC35D1Q9NTN3 355 aa10.99□□□□□ -0.65
CAPN1-212ENST00000527887 KLK11Q9UBX7 282 aa10.99□□□□□ -0.65
CAPN1-212ENST00000527887 ANAPC10Q9UM13 185 aa10.99□□□□□ -0.65
CAPN1-212ENST00000527887 KCNK7Q9Y2U2 307 aa10.99□□□□□ -0.65
CAPN1-212ENST00000527887 NBEAL2Q6ZNJ1 2754 aa10.98□□□□□ -0.65
CAPN1-212ENST00000527887 M0R1X1 148 aa10.98□□□□□ -0.65
CAPN1-212ENST00000527887 BRI3O95415 125 aa10.98□□□□□ -0.65
CAPN1-212ENST00000527887 CA2P00918 260 aa10.98□□□□□ -0.65
CAPN1-212ENST00000527887 NAT1P18440 290 aa10.98□□□□□ -0.65
CAPN1-212ENST00000527887 RFX2P48378 723 aa10.98□□□□□ -0.65
CAPN1-212ENST00000527887 ARPC1AQ92747 370 aa10.98□□□□□ -0.65
CAPN1-212ENST00000527887 ADTRPQ96IZ2 230 aa10.98□□□□□ -0.65
CAPN1-212ENST00000527887 PRR25Q96S07 402 aa10.98□□□□□ -0.65
CAPN1-212ENST00000527887 A0A0G2JLM5 398 aa10.97□□□□□ -0.65
CAPN1-212ENST00000527887 BET1O15155 118 aa10.97□□□□□ -0.65
CAPN1-212ENST00000527887 OR8U9P0C7N5 309 aa10.97□□□□□ -0.65
CAPN1-212ENST00000527887 GSTT2P0CG29 244 aa10.97□□□□□ -0.65
CAPN1-212ENST00000527887 GNB3P16520 340 aa10.97□□□□□ -0.65
CAPN1-212ENST00000527887 DTYMKP23919 212 aa10.97□□□□□ -0.65
CAPN1-212ENST00000527887 TAS2R19P59542 299 aa10.97□□□□□ -0.65
CAPN1-212ENST00000527887 GNG2P59768 71 aa10.97□□□□□ -0.65
CAPN1-212ENST00000527887 FXYD3Q14802 87 aa10.97□□□□□ -0.65
CAPN1-212ENST00000527887 RTL8BQ17RB0 113 aa10.97□□□□□ -0.65
CAPN1-212ENST00000527887 NRARPQ7Z6K4 114 aa10.97□□□□□ -0.65
CAPN1-212ENST00000527887 DLX4Q92988 240 aaPredicted RBP10.97□□□□□ -0.65
CAPN1-212ENST00000527887 CLCC1Q96S66 551 aa10.97□□□□□ -0.65
CAPN1-212ENST00000527887 OR2D2Q9H210 308 aa10.97□□□□□ -0.65
CAPN1-212ENST00000527887 SDHAF2Q9NX18 166 aa10.97□□□□□ -0.65
CAPN1-212ENST00000527887 SMAD5-AS1Q9Y6J3 95 aa10.97□□□□□ -0.65
CAPN1-212ENST00000527887 FAM240BA0A1B0GVZ2 78 aa10.96□□□□□ -0.65
CAPN1-212ENST00000527887 TMEM235A6NFC5 223 aa10.96□□□□□ -0.65
CAPN1-212ENST00000527887 SLC25A17O43808 307 aa10.96□□□□□ -0.65
CAPN1-212ENST00000527887 SAP30O75446 220 aa10.96□□□□□ -0.65
CAPN1-212ENST00000527887 CNIH1O95406 144 aa10.96□□□□□ -0.65
CAPN1-212ENST00000527887 CD74P04233 296 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms