RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 RELBQ01201 579 aa12.68□□□□□ -0.38
USH1C-207ENST00000527720 FFAR4Q5NUL3 377 aa12.68□□□□□ -0.38
USH1C-207ENST00000527720 SSUH2Q9Y2M2 353 aa12.68□□□□□ -0.38
USH1C-207ENST00000527720 A0A0G2JNJ9 132 aa12.67□□□□□ -0.38
USH1C-207ENST00000527720 UBE2CO00762 179 aa12.67□□□□□ -0.38
USH1C-207ENST00000527720 OR2B8PP59922 312 aa12.67□□□□□ -0.38
USH1C-207ENST00000527720 SNRPEP62304 92 aaKnown RBP12.67□□□□□ -0.38
USH1C-207ENST00000527720 TFF3Q07654 80 aa12.67□□□□□ -0.38
USH1C-207ENST00000527720 CT45A1Q5HYN5 189 aa12.67□□□□□ -0.38
USH1C-207ENST00000527720 FAM201AQ5SY85 155 aa12.67□□□□□ -0.38
USH1C-207ENST00000527720 ADAM5Q6NVV9 412 aa12.67□□□□□ -0.38
USH1C-207ENST00000527720 CT45A3Q8NHU0 189 aa12.67□□□□□ -0.38
USH1C-207ENST00000527720 ABHD17AQ96GS6 310 aa12.67□□□□□ -0.38
USH1C-207ENST00000527720 MANBALQ9NQG1 85 aa12.67□□□□□ -0.38
USH1C-207ENST00000527720 Q9UFV3 132 aa12.67□□□□□ -0.38
USH1C-207ENST00000527720 WDR83OSQ9Y284 106 aa12.67□□□□□ -0.38
USH1C-207ENST00000527720 ZGRF1Q86YA3 2104 aa12.67□□□□□ -0.38
USH1C-207ENST00000527720 TRGV8A0A0C4DH27 118 aa12.67□□□□□ -0.38
USH1C-207ENST00000527720 SLC31A2O15432 143 aa12.67□□□□□ -0.38
USH1C-207ENST00000527720 CYB5R3P00387 301 aaPredicted RBP12.67□□□□□ -0.38
USH1C-207ENST00000527720 TNFRSF1AP19438 455 aa12.67□□□□□ -0.38
USH1C-207ENST00000527720 CD1BP29016 333 aa12.67□□□□□ -0.38
USH1C-207ENST00000527720 VDAC2P45880 294 aaPredicted RBP12.67□□□□□ -0.38
USH1C-207ENST00000527720 MEF2BQ02080 365 aaPredicted RBP12.67□□□□□ -0.38
USH1C-207ENST00000527720 SPINK9Q5DT21 86 aa12.67□□□□□ -0.38
USH1C-207ENST00000527720 TMEM140Q9NV12 185 aa12.67□□□□□ -0.38
USH1C-207ENST00000527720 IDI2-AS1Q9NZ38 188 aa12.67□□□□□ -0.38
USH1C-207ENST00000527720 ZMAT5Q9UDW3 170 aaKnown RBP12.67□□□□□ -0.38
USH1C-207ENST00000527720 CYB5BO43169 146 aa12.66□□□□□ -0.38
USH1C-207ENST00000527720 SELLP14151 372 aa12.66□□□□□ -0.38
USH1C-207ENST00000527720 PSMB3P49720 205 aa12.66□□□□□ -0.38
USH1C-207ENST00000527720 TMPRSS3P57727 454 aa12.66□□□□□ -0.38
USH1C-207ENST00000527720 ELOBQ15370 118 aa12.66□□□□□ -0.38
USH1C-207ENST00000527720 ACOT6Q3I5F7 207 aaPredicted RBP12.66□□□□□ -0.38
USH1C-207ENST00000527720 SSX9Q7RTT3 188 aa12.66□□□□□ -0.38
USH1C-207ENST00000527720 ZNF439Q8NDP4 499 aa12.66□□□□□ -0.38
USH1C-207ENST00000527720 SDF2L1Q9HCN8 221 aa12.66□□□□□ -0.38
USH1C-207ENST00000527720 SAA2-SAA4A0A096LPE2 208 aa12.65□□□□□ -0.38
USH1C-207ENST00000527720 ZNF727A8MUV8 499 aa12.65□□□□□ -0.38
USH1C-207ENST00000527720 TMEM250H0YL14 139 aa12.65□□□□□ -0.38
USH1C-207ENST00000527720 SAA2P0DJI9 122 aaPredicted RBP12.65□□□□□ -0.38
USH1C-207ENST00000527720 SLC25A22Q9H936 323 aa12.65□□□□□ -0.38
USH1C-207ENST00000527720 HEYLQ9NQ87 328 aaPredicted RBP12.65□□□□□ -0.38
USH1C-207ENST00000527720 JKAMPQ9P055 326 aa12.65□□□□□ -0.38
USH1C-207ENST00000527720 METTL1Q9UBP6 276 aaKnown RBP12.65□□□□□ -0.38
USH1C-207ENST00000527720 RIF1Q5UIP0 2472 aaKnown RBP12.65□□□□□ -0.38
USH1C-207ENST00000527720 ZNF98A6NK75 572 aa12.65□□□□□ -0.38
USH1C-207ENST00000527720 IFNA10P01566 189 aa12.65□□□□□ -0.38
USH1C-207ENST00000527720 TMEM249Q2WGJ8 235 aa12.65□□□□□ -0.38
USH1C-207ENST00000527720 WDR25Q64LD2 544 aaPredicted RBP12.65□□□□□ -0.38
USH1C-207ENST00000527720 TCF23Q7RTU1 214 aa12.65□□□□□ -0.38
USH1C-207ENST00000527720 TP53TG5Q9Y2B4 290 aa12.65□□□□□ -0.38
USH1C-207ENST00000527720 ICE1Q9Y2F5 2266 aa12.65□□□□□ -0.38
USH1C-207ENST00000527720 C15orf61A6NNL5 157 aa12.64□□□□□ -0.39
USH1C-207ENST00000527720 IGHV2-5P01817 119 aa12.64□□□□□ -0.39
USH1C-207ENST00000527720 CD81P60033 236 aa12.64□□□□□ -0.39
USH1C-207ENST00000527720 MRPS11P82912 194 aaKnown RBP12.64□□□□□ -0.39
USH1C-207ENST00000527720 POU2AF1Q16633 256 aa12.64□□□□□ -0.39
USH1C-207ENST00000527720 C1orf229Q6ZS94 237 aaPredicted RBP12.64□□□□□ -0.39
USH1C-207ENST00000527720 Q8N7P7 452 aa12.64□□□□□ -0.39
USH1C-207ENST00000527720 OR10A7Q8NGE5 316 aa12.64□□□□□ -0.39
USH1C-207ENST00000527720 RAB1CQ92928 201 aa12.64□□□□□ -0.39
USH1C-207ENST00000527720 RAB24Q969Q5 203 aa12.64□□□□□ -0.39
USH1C-207ENST00000527720 CCL13Q99616 98 aa12.64□□□□□ -0.39
USH1C-207ENST00000527720 ZNF835Q9Y2P0 537 aa12.64□□□□□ -0.39
USH1C-207ENST00000527720 YLPM1P49750 1951 aaKnown RBP12.64□□□□□ -0.39
USH1C-207ENST00000527720 NKX6-3A6NJ46 265 aa12.64□□□□□ -0.39
USH1C-207ENST00000527720 SEC14L6B5MCN3 397 aa12.64□□□□□ -0.39
USH1C-207ENST00000527720 GFRA3O60609 400 aa12.64□□□□□ -0.39
USH1C-207ENST00000527720 IGHV3-7P01780 117 aa12.64□□□□□ -0.39
USH1C-207ENST00000527720 GYPAP02724 150 aa12.64□□□□□ -0.39
USH1C-207ENST00000527720 S100A8P05109 93 aa12.64□□□□□ -0.39
USH1C-207ENST00000527720 TLE1Q04724 770 aa12.64□□□□□ -0.39
USH1C-207ENST00000527720 DUX4L9Q6RFH8 374 aaPredicted RBP12.64□□□□□ -0.39
USH1C-207ENST00000527720 Q8WTZ3 238 aa12.64□□□□□ -0.39
USH1C-207ENST00000527720 CTDSP1Q9GZU7 261 aa12.64□□□□□ -0.39
USH1C-207ENST00000527720 TCF19Q9Y242 345 aa12.64□□□□□ -0.39
USH1C-207ENST00000527720 FOXA2Q9Y261 457 aaPredicted RBP12.64□□□□□ -0.39
USH1C-207ENST00000527720 hADV38S2A0JD32 116 aa12.63□□□□□ -0.39
USH1C-207ENST00000527720 C17orf100A8MU93 164 aa12.63□□□□□ -0.39
USH1C-207ENST00000527720 PRSS46E5RG02 174 aa12.63□□□□□ -0.39
USH1C-207ENST00000527720 HRASP01112 189 aa12.63□□□□□ -0.39
USH1C-207ENST00000527720 CDC34P49427 236 aaPredicted RBP12.63□□□□□ -0.39
USH1C-207ENST00000527720 RND2P52198 227 aa12.63□□□□□ -0.39
USH1C-207ENST00000527720 RPS16P62249 146 aaKnown RBP12.63□□□□□ -0.39
USH1C-207ENST00000527720 VKORC1L1Q8N0U8 176 aa12.63□□□□□ -0.39
USH1C-207ENST00000527720 DEFB108BQ8NET1 73 aa12.63□□□□□ -0.39
USH1C-207ENST00000527720 RHOVQ96L33 236 aa12.63□□□□□ -0.39
USH1C-207ENST00000527720 NAT8Q9UHE5 227 aa12.63□□□□□ -0.39
USH1C-207ENST00000527720 RPUSD1Q9UJJ7 312 aaKnown RBP12.63□□□□□ -0.39
USH1C-207ENST00000527720 LINC00312Q9Y6C7 94 aa12.63□□□□□ -0.39
USH1C-207ENST00000527720 BOD1L1Q8NFC6 3051 aa12.63□□□□□ -0.39
USH1C-207ENST00000527720 AKAP13Q12802 2813 aa12.63□□□□□ -0.39
USH1C-207ENST00000527720 DPRXA6NFQ7 191 aa12.63□□□□□ -0.39
USH1C-207ENST00000527720 CLDN34H7C241 214 aa12.63□□□□□ -0.39
USH1C-207ENST00000527720 OPRK1P41145 380 aa12.63□□□□□ -0.39
USH1C-207ENST00000527720 RPS10P46783 165 aaKnown RBP12.63□□□□□ -0.39
USH1C-207ENST00000527720 HNF4GQ14541 408 aa12.63□□□□□ -0.39
USH1C-207ENST00000527720 ADIPOQQ15848 244 aa12.63□□□□□ -0.39
USH1C-207ENST00000527720 GFRALQ6UXV0 394 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms