RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 ASB7Q9H672 318 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 PARP11Q9NR21 331 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 PRTFDC1Q9NRG1 225 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 SLC39A9Q9NUM3 307 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 ARMC1Q9NVT9 282 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 TMEM216Q9P0N5 145 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 RSL24D1Q9UHA3 163 aaKnown RBP0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 MCTS1Q9ULC4 181 aaKnown RBP0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 HHLA2Q9UM44 414 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 GINS2Q9Y248 185 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 NDUFAF1Q9Y375 327 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 OR51B4Q9Y5P0 310 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 MTCH2Q9Y6C9 303 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 COL5A3P25940 1745 aaPredicted RBP0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 UNC13AQ9UPW8 1703 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 GPATCH8Q9UKJ3 1502 aaKnown RBP0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 ATRNO75882 1429 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 ZFYVE9O95405 1425 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 COL11A1P12107 1806 aaPredicted RBP0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 ARHGEF10O15013 1369 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 FLT4P35916 1363 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 ABCC11Q96J66 1382 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 USP42Q9H9J4 1324 aaKnown RBP0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 TRBV20OR9-2A0A075B6H5 130 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 A0A096LPI6 279 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 IGHV3-21A0A0B4J1V1 117 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 A0A0B4J2C4 111 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 LOC107984156A0A0G2JMH3 177 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 TEX50A0A1B0GTY4 177 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 LOC105371267A0A1B0GV96 52 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 ODAMA1E959 279 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 FAM92AA1XBS5 289 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 TRAPPC13A5PLN9 417 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 LINC00862A6NCI5 91 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 PGPA6NDG6 321 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 FAM183AA6NL82 134 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 BBIP1A8MTZ0 92 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 ATP6V1G2-DDX39BF2Z307 99 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 H3BSA7 217 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 M0QZK8 103 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 UPK1AO00322 258 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 FAAHO00519 579 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 CYB5BO43169 146 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 FGF16O43320 207 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 TCF21O43680 179 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 KLRC4O43908 158 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 MFSD11O43934 449 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 FADS1O60427 444 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 CREBL2O60519 120 aaPredicted RBP0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 SMIM24O75264 130 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 LYZL6O75951 148 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 OR2J2O76002 312 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 NAPSAO96009 420 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 CA2P00918 260 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 IGLV2-8P01709 118 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 IGLV6-57P01721 117 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 IGHV3-53P01767 116 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 SERPINE1P05121 402 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 PFN1P07737 140 aaKnown RBP0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 PAEPP09466 180 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 CD28P10747 220 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 ZNF708P17019 499 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 NFYBP25208 207 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 IMPA1P29218 277 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 POLR2IP36954 125 aaKnown RBP0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 SRP14P37108 136 aaKnown RBP0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 CCR2P41597 374 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 CA7P43166 264 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 CSN1S1P47710 185 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 SRP9P49458 86 aaKnown RBP0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 HINT1P49773 126 aaPredicted RBP0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 RAB5CP51148 216 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 AKR1C2P52895 323 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 TMBIM6P55061 237 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 CTBP2P56545 445 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 PIGPP57054 158 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 TAS2R45P59539 299 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 C1QTNF8P60827 252 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 RANP62826 216 aaKnown RBP0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 RBX1P62877 108 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 EIF5AP63241 154 aaKnown RBP0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 PSPHP78330 225 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 TFAMQ00059 246 aaKnown RBP0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 PSG4Q00888 419 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 MYL5Q02045 173 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 RELAQ04206 551 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 TMEM267Q0VDI3 215 aaPredicted RBP0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 IL15RAQ13261 267 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 ENDOGQ14249 297 aaKnown RBP0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 PAFAH1B3Q15102 231 aaKnown RBP0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 SURF2Q15527 256 aaPredicted RBP0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 MMDQ15546 238 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 HIST3H3Q16695 136 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 NDUFA5Q16718 116 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 Q499Y3 187 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 TMEM128Q5BJH2 165 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 MESTQ5EB52 335 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 CLLU1OSQ5K130 101 aa0.73□□□□□ -2.29
ECHDC1-219ENST00000526299 FAM201AQ5SY85 155 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms