RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 UBE2NLQ5JXB2 153 aa10.79□□□□□ -0.68
CPSF1-201ENST00000526271 ZNF343Q6P1L6 599 aa10.79□□□□□ -0.68
CPSF1-201ENST00000526271 OR56B1Q8NGI3 324 aa10.79□□□□□ -0.68
CPSF1-201ENST00000526271 DCUN1D5Q9BTE7 237 aa10.79□□□□□ -0.68
CPSF1-201ENST00000526271 ELOVL1Q9BW60 279 aa10.79□□□□□ -0.68
CPSF1-201ENST00000526271 ATG5Q9H1Y0 275 aa10.79□□□□□ -0.68
CPSF1-201ENST00000526271 RHBDL2Q9NX52 303 aa10.79□□□□□ -0.68
CPSF1-201ENST00000526271 HSF4Q9ULV5 492 aa10.79□□□□□ -0.68
CPSF1-201ENST00000526271 DMRT1Q9Y5R6 373 aa10.79□□□□□ -0.68
CPSF1-201ENST00000526271 VPS13DQ5THJ4 4388 aa10.78□□□□□ -0.68
CPSF1-201ENST00000526271 A0A0A6YYH2 397 aa10.78□□□□□ -0.68
CPSF1-201ENST00000526271 A6NJ64 397 aa10.78□□□□□ -0.68
CPSF1-201ENST00000526271 CTDSP2O14595 271 aa10.78□□□□□ -0.68
CPSF1-201ENST00000526271 SCGNO76038 276 aa10.78□□□□□ -0.68
CPSF1-201ENST00000526271 SPDEFO95238 335 aa10.78□□□□□ -0.68
CPSF1-201ENST00000526271 BRI3O95415 125 aa10.78□□□□□ -0.68
CPSF1-201ENST00000526271 APOA1P02647 267 aa10.78□□□□□ -0.68
CPSF1-201ENST00000526271 CD7P09564 240 aa10.78□□□□□ -0.68
CPSF1-201ENST00000526271 CD3GP09693 182 aa10.78□□□□□ -0.68
CPSF1-201ENST00000526271 MC5RP33032 325 aa10.78□□□□□ -0.68
CPSF1-201ENST00000526271 CEACAM6P40199 344 aa10.78□□□□□ -0.68
CPSF1-201ENST00000526271 HLA-DRB3P79483 266 aa10.78□□□□□ -0.68
CPSF1-201ENST00000526271 PLAC9Q5JTB6 97 aa10.78□□□□□ -0.68
CPSF1-201ENST00000526271 SAMD12Q8N8I0 201 aa10.78□□□□□ -0.68
CPSF1-201ENST00000526271 OR10R2Q8NGX6 335 aa10.78□□□□□ -0.68
CPSF1-201ENST00000526271 NEDD4LQ96PU5 975 aa10.78□□□□□ -0.68
CPSF1-201ENST00000526271 TINAGL1Q9GZM7 467 aaPredicted RBP10.78□□□□□ -0.68
CPSF1-201ENST00000526271 PLEKHA3Q9HB20 300 aa10.78□□□□□ -0.68
CPSF1-201ENST00000526271 BMPR1BO00238 502 aa10.77□□□□□ -0.69
CPSF1-201ENST00000526271 HPGDSO60760 199 aa10.77□□□□□ -0.69
CPSF1-201ENST00000526271 APELAP0DMC3 54 aa10.77□□□□□ -0.69
CPSF1-201ENST00000526271 ZP3P21754 424 aa10.77□□□□□ -0.69
CPSF1-201ENST00000526271 RPS16P62249 146 aaKnown RBP10.77□□□□□ -0.69
CPSF1-201ENST00000526271 ZNF45Q02386 682 aa10.77□□□□□ -0.69
CPSF1-201ENST00000526271 CNPY1Q3B7I2 92 aa10.77□□□□□ -0.69
CPSF1-201ENST00000526271 MCFD2Q8NI22 146 aa10.77□□□□□ -0.69
CPSF1-201ENST00000526271 SETD6Q8TBK2 473 aa10.77□□□□□ -0.69
CPSF1-201ENST00000526271 S100A16Q96FQ6 103 aaKnown RBP10.77□□□□□ -0.69
CPSF1-201ENST00000526271 ARHGAP5-AS1Q96IT6 56 aa10.77□□□□□ -0.69
CPSF1-201ENST00000526271 PECRQ9BY49 303 aa10.77□□□□□ -0.69
CPSF1-201ENST00000526271 MIXL1Q9H2W2 232 aa10.77□□□□□ -0.69
CPSF1-201ENST00000526271 Q9N2K0 584 aa10.77□□□□□ -0.69
CPSF1-201ENST00000526271 PLEKHJ1Q9NW61 149 aa10.77□□□□□ -0.69
CPSF1-201ENST00000526271 SIGLEC8Q9NYZ4 499 aa10.77□□□□□ -0.69
CPSF1-201ENST00000526271 KCNK7Q9Y2U2 307 aa10.77□□□□□ -0.69
CPSF1-201ENST00000526271 H3BUA1 57 aa10.76□□□□□ -0.69
CPSF1-201ENST00000526271 XRCC3O43542 346 aa10.76□□□□□ -0.69
CPSF1-201ENST00000526271 EIF4EP06730 217 aaKnown RBP10.76□□□□□ -0.69
CPSF1-201ENST00000526271 ELK1P19419 428 aa10.76□□□□□ -0.69
CPSF1-201ENST00000526271 DEFB125Q8N687 156 aa10.76□□□□□ -0.69
CPSF1-201ENST00000526271 ADAD2Q8NCV1 583 aaKnown RBP10.76□□□□□ -0.69
CPSF1-201ENST00000526271 RAB3CQ96E17 227 aa10.76□□□□□ -0.69
CPSF1-201ENST00000526271 TSNAXQ99598 290 aaKnown RBP10.76□□□□□ -0.69
CPSF1-201ENST00000526271 DIABLOQ9NR28 239 aa10.76□□□□□ -0.69
CPSF1-201ENST00000526271 ZNF355PQ9NSJ1 428 aa10.76□□□□□ -0.69
CPSF1-201ENST00000526271 PEF1Q9UBV8 284 aaKnown RBP10.76□□□□□ -0.69
CPSF1-201ENST00000526271 C13orf42A0A1B0GVH6 325 aa10.75□□□□□ -0.69
CPSF1-201ENST00000526271 PRH1P02810 166 aa10.75□□□□□ -0.69
CPSF1-201ENST00000526271 EWSR1Q01844 656 aaKnown RBP eCLIP10.75□□□□□ -0.69
CPSF1-201ENST00000526271 ARL6IP1Q15041 203 aa10.75□□□□□ -0.69
CPSF1-201ENST00000526271 CD300EQ496F6 205 aaPredicted RBP10.75□□□□□ -0.69
CPSF1-201ENST00000526271 CDNFQ49AH0 187 aa10.75□□□□□ -0.69
CPSF1-201ENST00000526271 PDPNQ86YL7 162 aa10.75□□□□□ -0.69
CPSF1-201ENST00000526271 BVESQ8NE79 360 aa10.75□□□□□ -0.69
CPSF1-201ENST00000526271 SDHAF2Q9NX18 166 aa10.75□□□□□ -0.69
CPSF1-201ENST00000526271 ZNF230Q9UIE0 474 aaPredicted RBP10.75□□□□□ -0.69
CPSF1-201ENST00000526271 SELENOKQ9Y6D0 94 aa10.75□□□□□ -0.69
CPSF1-201ENST00000526271 H0Y980 276 aa10.74□□□□□ -0.69
CPSF1-201ENST00000526271 M0R1X1 148 aa10.74□□□□□ -0.69
CPSF1-201ENST00000526271 MFNGO00587 321 aa10.74□□□□□ -0.69
CPSF1-201ENST00000526271 HIST1H1DP16402 221 aaKnown RBP10.74□□□□□ -0.69
CPSF1-201ENST00000526271 GNB3P16520 340 aa10.74□□□□□ -0.69
CPSF1-201ENST00000526271 ZBTB25P24278 435 aa10.74□□□□□ -0.69
CPSF1-201ENST00000526271 C19orf35Q6ZS72 473 aa10.74□□□□□ -0.69
CPSF1-201ENST00000526271 MOB1BQ7L9L4 216 aa10.74□□□□□ -0.69
CPSF1-201ENST00000526271 LAX1Q8IWV1 398 aa10.74□□□□□ -0.69
CPSF1-201ENST00000526271 Q8N402 240 aa10.74□□□□□ -0.69
CPSF1-201ENST00000526271 EDARADDQ8WWZ3 215 aa10.74□□□□□ -0.69
CPSF1-201ENST00000526271 DDB2Q92466 427 aa10.74□□□□□ -0.69
CPSF1-201ENST00000526271 C6orf62Q9GZU0 229 aaPredicted RBP10.74□□□□□ -0.69
CPSF1-201ENST00000526271 CHMP1AQ9HD42 196 aaPredicted RBP10.74□□□□□ -0.69
CPSF1-201ENST00000526271 AKIP1Q9NQ31 210 aa10.74□□□□□ -0.69
CPSF1-201ENST00000526271 SLC35D1Q9NTN3 355 aa10.74□□□□□ -0.69
CPSF1-201ENST00000526271 RDH8Q9NYR8 311 aa10.74□□□□□ -0.69
CPSF1-201ENST00000526271 TRAV18A0A075B6X5 111 aa10.73□□□□□ -0.69
CPSF1-201ENST00000526271 RGS5O15539 181 aa10.73□□□□□ -0.69
CPSF1-201ENST00000526271 TPPPO94811 219 aa10.73□□□□□ -0.69
CPSF1-201ENST00000526271 HLA-DQB1P01920 261 aa10.73□□□□□ -0.69
CPSF1-201ENST00000526271 TNFSF8P32971 234 aa10.73□□□□□ -0.69
CPSF1-201ENST00000526271 CD81P60033 236 aa10.73□□□□□ -0.69
CPSF1-201ENST00000526271 TMEM177Q53S58 311 aa10.73□□□□□ -0.69
CPSF1-201ENST00000526271 HACD4Q5VWC8 232 aa10.73□□□□□ -0.69
CPSF1-201ENST00000526271 SOSTQ9BQB4 213 aa10.73□□□□□ -0.69
CPSF1-201ENST00000526271 NEURL2Q9BR09 285 aa10.73□□□□□ -0.69
CPSF1-201ENST00000526271 RIMS4Q9H426 269 aaPredicted RBP10.73□□□□□ -0.69
CPSF1-201ENST00000526271 AUNIPQ9H7T9 357 aa10.73□□□□□ -0.69
CPSF1-201ENST00000526271 ELF5Q9UKW6 265 aaPredicted RBP10.73□□□□□ -0.69
CPSF1-201ENST00000526271 HECTD4Q9Y4D8 3996 aa10.73□□□□□ -0.69
CPSF1-201ENST00000526271 TRBV9A0A0B4J1U6 114 aa10.72□□□□□ -0.69
CPSF1-201ENST00000526271 A0A0G2JLM5 398 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms