RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 LIN54Q6MZP7 749 aa16.43■□□□□ 0.22
CD44-222ENST00000526025 TBC1D26Q86UD7 250 aa16.43■□□□□ 0.22
CD44-222ENST00000526025 WNT10AQ9GZT5 417 aa16.43■□□□□ 0.22
CD44-222ENST00000526025 COPZ2Q9P299 210 aa16.43■□□□□ 0.22
CD44-222ENST00000526025 METTL1Q9UBP6 276 aaKnown RBP16.43■□□□□ 0.22
CD44-222ENST00000526025 SIGLEC9Q9Y336 463 aa16.43■□□□□ 0.22
CD44-222ENST00000526025 TENM1Q9UKZ4 2725 aa16.43■□□□□ 0.22
CD44-222ENST00000526025 SLC25A17O43808 307 aa16.42■□□□□ 0.22
CD44-222ENST00000526025 RAMP3O60896 148 aa16.42■□□□□ 0.22
CD44-222ENST00000526025 VSIG10L2P0DP72 767 aa16.42■□□□□ 0.22
CD44-222ENST00000526025 C9orf152Q5JTZ5 239 aa16.42■□□□□ 0.22
CD44-222ENST00000526025 C12orf54Q6X4T0 127 aa16.42■□□□□ 0.22
CD44-222ENST00000526025 SLC35E3Q7Z769 313 aa16.42■□□□□ 0.22
CD44-222ENST00000526025 CADM3Q8N126 398 aa16.42■□□□□ 0.22
CD44-222ENST00000526025 VSTM2AQ8TAG5 236 aa16.42■□□□□ 0.22
CD44-222ENST00000526025 RTBDNQ9BSG5 229 aaPredicted RBP16.42■□□□□ 0.22
CD44-222ENST00000526025 FBXL15Q9H469 300 aa16.42■□□□□ 0.22
CD44-222ENST00000526025 C5orf66Q9H5L9 145 aa16.42■□□□□ 0.22
CD44-222ENST00000526025 SH2D7A6NKC9 451 aaPredicted RBP16.41■□□□□ 0.22
CD44-222ENST00000526025 CREBL2O60519 120 aaPredicted RBP16.41■□□□□ 0.22
CD44-222ENST00000526025 PEX14O75381 377 aa16.41■□□□□ 0.22
CD44-222ENST00000526025 PLGLAQ15195 96 aa16.41■□□□□ 0.22
CD44-222ENST00000526025 ARSJQ5FYB0 599 aaPredicted RBP16.41■□□□□ 0.22
CD44-222ENST00000526025 PPP1R27Q86WC6 154 aa16.41■□□□□ 0.22
CD44-222ENST00000526025 FOXRED2Q8IWF2 684 aa16.41■□□□□ 0.22
CD44-222ENST00000526025 SPATA3Q8NHX4 192 aa16.41■□□□□ 0.22
CD44-222ENST00000526025 WFDC12Q8WWY7 111 aa16.41■□□□□ 0.22
CD44-222ENST00000526025 IGHV7-81A0A0B4J1V7 117 aa16.4■□□□□ 0.22
CD44-222ENST00000526025 H0Y980 276 aa16.4■□□□□ 0.22
CD44-222ENST00000526025 AP4M1O00189 453 aa16.4■□□□□ 0.22
CD44-222ENST00000526025 IGF1P05019 195 aa16.4■□□□□ 0.22
CD44-222ENST00000526025 FGF2P09038 288 aa16.4■□□□□ 0.22
CD44-222ENST00000526025 SAA1P0DJI8 122 aaPredicted RBP16.4■□□□□ 0.22
CD44-222ENST00000526025 NQO2P16083 231 aa16.4■□□□□ 0.22
CD44-222ENST00000526025 PI3P19957 117 aa16.4■□□□□ 0.22
CD44-222ENST00000526025 RBMS2Q15434 407 aaKnown RBP16.4■□□□□ 0.22
CD44-222ENST00000526025 ZNF562Q6V9R5 426 aa16.4■□□□□ 0.22
CD44-222ENST00000526025 WIPF2Q8TF74 440 aaPredicted RBP16.4■□□□□ 0.22
CD44-222ENST00000526025 RHOVQ96L33 236 aa16.4■□□□□ 0.22
CD44-222ENST00000526025 HSPB9Q9BQS6 159 aa16.4■□□□□ 0.22
CD44-222ENST00000526025 RPA2P15927 270 aa16.39■□□□□ 0.21
CD44-222ENST00000526025 ZNF585BQ52M93 769 aa16.39■□□□□ 0.21
CD44-222ENST00000526025 PUSL1Q8N0Z8 303 aaKnown RBP16.39■□□□□ 0.21
CD44-222ENST00000526025 OR4A5Q8NH83 315 aa16.39■□□□□ 0.21
CD44-222ENST00000526025 CHPT1Q8WUD6 406 aa16.39■□□□□ 0.21
CD44-222ENST00000526025 ZNF747Q9BV97 191 aa16.39■□□□□ 0.21
CD44-222ENST00000526025 OR51J1Q9H342 316 aa16.39■□□□□ 0.21
CD44-222ENST00000526025 BET1LQ9NYM9 111 aa16.39■□□□□ 0.21
CD44-222ENST00000526025 VSIG4Q9Y279 399 aa16.39■□□□□ 0.21
CD44-222ENST00000526025 PLA2G10O15496 165 aa16.38■□□□□ 0.21
CD44-222ENST00000526025 UPK1BO75841 260 aa16.38■□□□□ 0.21
CD44-222ENST00000526025 OR2A4O95047 310 aa16.38■□□□□ 0.21
CD44-222ENST00000526025 CRIP2P52943 208 aaPredicted RBP16.38■□□□□ 0.21
CD44-222ENST00000526025 CX3CL1P78423 397 aa16.38■□□□□ 0.21
CD44-222ENST00000526025 TMEM95Q3KNT9 176 aa16.38■□□□□ 0.21
CD44-222ENST00000526025 KLHDC1Q8N7A1 406 aa16.38■□□□□ 0.21
CD44-222ENST00000526025 OR2A7Q96R45 310 aa16.38■□□□□ 0.21
CD44-222ENST00000526025 GON7Q9BXV9 100 aa16.38■□□□□ 0.21
CD44-222ENST00000526025 NAA60Q9H7X0 242 aa16.38■□□□□ 0.21
CD44-222ENST00000526025 TPSG1Q9NRR2 321 aa16.38■□□□□ 0.21
CD44-222ENST00000526025 ANK2Q01484 3957 aa16.37■□□□□ 0.21
CD44-222ENST00000526025 C3orf85A0A1B0GTC6 90 aa16.37■□□□□ 0.21
CD44-222ENST00000526025 CRYM-AS1A6NIL9 109 aa16.37■□□□□ 0.21
CD44-222ENST00000526025 FCN1O00602 326 aa16.37■□□□□ 0.21
CD44-222ENST00000526025 LYRM1O43325 122 aa16.37■□□□□ 0.21
CD44-222ENST00000526025 KBTBD11O94819 623 aa16.37■□□□□ 0.21
CD44-222ENST00000526025 S1PR2O95136 353 aa16.37■□□□□ 0.21
CD44-222ENST00000526025 BTCP35070 178 aa16.37■□□□□ 0.21
CD44-222ENST00000526025 LPAR6P43657 344 aa16.37■□□□□ 0.21
CD44-222ENST00000526025 PRSS8Q16651 343 aa16.37■□□□□ 0.21
CD44-222ENST00000526025 MRGPRG-AS1Q2M3A8 158 aa16.37■□□□□ 0.21
CD44-222ENST00000526025 MMD2Q8IY49 270 aa16.37■□□□□ 0.21
CD44-222ENST00000526025 TMEM167AQ8TBQ9 72 aa16.37■□□□□ 0.21
CD44-222ENST00000526025 NDUFB6O95139 128 aa16.36■□□□□ 0.21
CD44-222ENST00000526025 CA2P00918 260 aa16.36■□□□□ 0.21
CD44-222ENST00000526025 SERPINE2P07093 398 aa16.36■□□□□ 0.21
CD44-222ENST00000526025 IL6RP08887 468 aaPredicted RBP16.36■□□□□ 0.21
CD44-222ENST00000526025 UCP1P25874 307 aa16.36■□□□□ 0.21
CD44-222ENST00000526025 STPG2Q8N412 459 aa16.36■□□□□ 0.21
CD44-222ENST00000526025 C3orf56Q8N813 242 aa16.36■□□□□ 0.21
CD44-222ENST00000526025 R3HDM4Q96D70 268 aa16.36■□□□□ 0.21
CD44-222ENST00000526025 GALNT14Q96FL9 552 aa16.36■□□□□ 0.21
CD44-222ENST00000526025 TEX13DA0A0J9YY54 714 aaPredicted RBP16.35■□□□□ 0.21
CD44-222ENST00000526025 LINC01548A6NM66 108 aa16.35■□□□□ 0.21
CD44-222ENST00000526025 MARCH11A6NNE9 402 aa16.35■□□□□ 0.21
CD44-222ENST00000526025 MAS1LP35410 378 aa16.35■□□□□ 0.21
CD44-222ENST00000526025 UBE2MP61081 183 aaKnown RBP16.35■□□□□ 0.21
CD44-222ENST00000526025 ERVK-16P61578 105 aa16.35■□□□□ 0.21
CD44-222ENST00000526025 DHODHQ02127 395 aa16.35■□□□□ 0.21
CD44-222ENST00000526025 ASAH1Q13510 395 aa16.35■□□□□ 0.21
CD44-222ENST00000526025 OR4A47Q6IF82 309 aa16.35■□□□□ 0.21
CD44-222ENST00000526025 SGPP2Q8IWX5 399 aa16.35■□□□□ 0.21
CD44-222ENST00000526025 TMEM230Q96A57 120 aa16.35■□□□□ 0.21
CD44-222ENST00000526025 TP53RKQ96S44 253 aa16.35■□□□□ 0.21
CD44-222ENST00000526025 LINC00854A0A1B0GVQ3 168 aa16.34■□□□□ 0.21
CD44-222ENST00000526025 HAX1O00165 279 aa16.34■□□□□ 0.21
CD44-222ENST00000526025 ATP6V0E1O15342 81 aa16.34■□□□□ 0.21
CD44-222ENST00000526025 ATG12O94817 140 aa16.34■□□□□ 0.21
CD44-222ENST00000526025 CCR6P51684 374 aa16.34■□□□□ 0.21
CD44-222ENST00000526025 SSBP2P81877 361 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms