RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 FNDC9Q8TBE3 224 aa2.38□□□□□ -2.03
CSDE1-211ENST00000525970 GNPNAT1Q96EK6 184 aaPredicted RBP2.38□□□□□ -2.03
CSDE1-211ENST00000525970 ABCG5Q9H222 651 aa2.38□□□□□ -2.03
CSDE1-211ENST00000525970 ASF1BQ9NVP2 202 aa2.38□□□□□ -2.03
CSDE1-211ENST00000525970 PXMP4Q9Y6I8 212 aa2.38□□□□□ -2.03
CSDE1-211ENST00000525970 SMARCA4P51532 1647 aa2.38□□□□□ -2.03
CSDE1-211ENST00000525970 NKTRP30414 1462 aaKnown RBP2.38□□□□□ -2.03
CSDE1-211ENST00000525970 GRIN2BQ13224 1484 aa2.38□□□□□ -2.03
CSDE1-211ENST00000525970 COL1A2P08123 1366 aa2.37□□□□□ -2.03
CSDE1-211ENST00000525970 THOC2Q8NI27 1593 aaKnown RBP2.37□□□□□ -2.03
CSDE1-211ENST00000525970 DHRS12A0PJE2 317 aa2.37□□□□□ -2.03
CSDE1-211ENST00000525970 C19orf71A6NCJ1 209 aa2.37□□□□□ -2.03
CSDE1-211ENST00000525970 SLC17A3O00476 420 aa2.37□□□□□ -2.03
CSDE1-211ENST00000525970 HAND1O96004 215 aa2.37□□□□□ -2.03
CSDE1-211ENST00000525970 CDK9P50750 372 aaKnown RBP2.37□□□□□ -2.03
CSDE1-211ENST00000525970 GZMMP51124 257 aa2.37□□□□□ -2.03
CSDE1-211ENST00000525970 ZNF140P52738 457 aaPredicted RBP2.37□□□□□ -2.03
CSDE1-211ENST00000525970 FKBP1AP62942 108 aaKnown RBP2.37□□□□□ -2.03
CSDE1-211ENST00000525970 ZNF141Q15928 474 aa2.37□□□□□ -2.03
CSDE1-211ENST00000525970 FAM229BQ4G0N7 80 aa2.37□□□□□ -2.03
CSDE1-211ENST00000525970 HIST2H3PS2Q5TEC6 136 aa2.37□□□□□ -2.03
CSDE1-211ENST00000525970 RASL11AQ6T310 242 aa2.37□□□□□ -2.03
CSDE1-211ENST00000525970 OR11H1Q8NG94 326 aa2.37□□□□□ -2.03
CSDE1-211ENST00000525970 OR2T4Q8NH00 348 aa2.37□□□□□ -2.03
CSDE1-211ENST00000525970 SGMS2Q8NHU3 365 aa2.37□□□□□ -2.03
CSDE1-211ENST00000525970 FAM107BQ9H098 131 aa2.37□□□□□ -2.03
CSDE1-211ENST00000525970 SMDT1Q9H4I9 107 aa2.37□□□□□ -2.03
CSDE1-211ENST00000525970 FKBP14Q9NWM8 211 aa2.37□□□□□ -2.03
CSDE1-211ENST00000525970 TAAR3PQ9P1P4 343 aa2.37□□□□□ -2.03
CSDE1-211ENST00000525970 FYCO1Q9BQS8 1478 aa2.37□□□□□ -2.03
CSDE1-211ENST00000525970 GCC2Q8IWJ2 1684 aa2.37□□□□□ -2.03
CSDE1-211ENST00000525970 CCDC171Q6TFL3 1326 aa2.37□□□□□ -2.03
CSDE1-211ENST00000525970 SUPT6HQ7KZ85 1726 aaKnown RBP2.37□□□□□ -2.03
CSDE1-211ENST00000525970 NAIPQ13075 1403 aa2.36□□□□□ -2.03
CSDE1-211ENST00000525970 MYOM3Q5VTT5 1437 aa2.36□□□□□ -2.03
CSDE1-211ENST00000525970 TOP2BQ02880 1626 aa2.36□□□□□ -2.03
CSDE1-211ENST00000525970 A0A087WUJ7 227 aa2.36□□□□□ -2.03
CSDE1-211ENST00000525970 IGHV1-69-2A0A0G2JMI3 117 aa2.36□□□□□ -2.03
CSDE1-211ENST00000525970 LOC102725191A0A1B0GVB3 256 aa2.36□□□□□ -2.03
CSDE1-211ENST00000525970 A0A1W2PQ67 120 aa2.36□□□□□ -2.03
CSDE1-211ENST00000525970 C9JCJ5 164 aa2.36□□□□□ -2.03
CSDE1-211ENST00000525970 LY6HO94772 140 aa2.36□□□□□ -2.03
CSDE1-211ENST00000525970 COL8A2P25067 703 aa2.36□□□□□ -2.03
CSDE1-211ENST00000525970 BASP1P80723 227 aaKnown RBP2.36□□□□□ -2.03
CSDE1-211ENST00000525970 OR4K13Q8NH42 304 aa2.36□□□□□ -2.03
CSDE1-211ENST00000525970 OR52E6Q96RD3 313 aa2.36□□□□□ -2.03
CSDE1-211ENST00000525970 HEY1Q9Y5J3 304 aa2.36□□□□□ -2.03
CSDE1-211ENST00000525970 PRXQ9BXM0 1461 aa2.36□□□□□ -2.03
CSDE1-211ENST00000525970 NLRP1Q9C000 1473 aa2.36□□□□□ -2.03
CSDE1-211ENST00000525970 SHROOM3Q8TF72 1996 aa2.36□□□□□ -2.03
CSDE1-211ENST00000525970 REREQ9P2R6 1566 aa2.36□□□□□ -2.03
CSDE1-211ENST00000525970 ANKRD36BQ8N2N9 1353 aa2.36□□□□□ -2.03
CSDE1-211ENST00000525970 ABCC12Q96J65 1359 aa2.36□□□□□ -2.03
CSDE1-211ENST00000525970 TRPM6Q9BX84 2022 aa2.35□□□□□ -2.03
CSDE1-211ENST00000525970 KIAA1107Q9UPP5 1409 aa2.35□□□□□ -2.03
CSDE1-211ENST00000525970 A0A1B0GV50 99 aa2.35□□□□□ -2.03
CSDE1-211ENST00000525970 PQLC2LA1A4F0 135 aa2.35□□□□□ -2.03
CSDE1-211ENST00000525970 A8MUN3 132 aa2.35□□□□□ -2.03
CSDE1-211ENST00000525970 LST1O00453 97 aa2.35□□□□□ -2.03
CSDE1-211ENST00000525970 BHLHE40O14503 412 aa2.35□□□□□ -2.03
CSDE1-211ENST00000525970 COX7A2LO14548 114 aa2.35□□□□□ -2.03
CSDE1-211ENST00000525970 CD5P06127 495 aa2.35□□□□□ -2.03
CSDE1-211ENST00000525970 FAM228BP0C875 321 aa2.35□□□□□ -2.03
CSDE1-211ENST00000525970 FGF6P10767 208 aa2.35□□□□□ -2.03
CSDE1-211ENST00000525970 HIST1H1TP22492 207 aaPredicted RBP2.35□□□□□ -2.03
CSDE1-211ENST00000525970 ARF6P62330 175 aa2.35□□□□□ -2.03
CSDE1-211ENST00000525970 MRPS25P82663 173 aaKnown RBP2.35□□□□□ -2.03
CSDE1-211ENST00000525970 HTR4Q13639 388 aa2.35□□□□□ -2.03
CSDE1-211ENST00000525970 EDDM3AQ14507 147 aa2.35□□□□□ -2.03
CSDE1-211ENST00000525970 TNFAIP8L3Q5GJ75 292 aa2.35□□□□□ -2.03
CSDE1-211ENST00000525970 NOXRED1Q6NXP6 359 aa2.35□□□□□ -2.03
CSDE1-211ENST00000525970 IGF2BP2-AS1Q96M15 143 aa2.35□□□□□ -2.03
CSDE1-211ENST00000525970 OR8B2Q96RD0 313 aa2.35□□□□□ -2.03
CSDE1-211ENST00000525970 MRPL27Q9P0M9 148 aaKnown RBP2.35□□□□□ -2.03
CSDE1-211ENST00000525970 EHBP1L1Q8N3D4 1523 aa2.35□□□□□ -2.03
CSDE1-211ENST00000525970 FAM135AQ9P2D6 1515 aa2.35□□□□□ -2.03
CSDE1-211ENST00000525970 KDM5BQ9UGL1 1544 aa2.35□□□□□ -2.03
CSDE1-211ENST00000525970 KDM5CP41229 1560 aa2.35□□□□□ -2.03
CSDE1-211ENST00000525970 BIVM-ERCC5R4GMW8 1640 aa2.35□□□□□ -2.03
CSDE1-211ENST00000525970 CASKIN1Q8WXD9 1431 aa2.34□□□□□ -2.03
CSDE1-211ENST00000525970 NCOA3Q9Y6Q9 1424 aa2.34□□□□□ -2.03
CSDE1-211ENST00000525970 BCORL1Q5H9F3 1711 aa2.34□□□□□ -2.03
CSDE1-211ENST00000525970 POLA1P09884 1462 aaPredicted RBP2.34□□□□□ -2.03
CSDE1-211ENST00000525970 RALGAPBQ86X10 1494 aa2.34□□□□□ -2.03
CSDE1-211ENST00000525970 TEX14Q8IWB6 1497 aa2.34□□□□□ -2.03
CSDE1-211ENST00000525970 EFCAB5A4FU69 1503 aa2.34□□□□□ -2.03
CSDE1-211ENST00000525970 EPRSP07814 1512 aaKnown RBP2.34□□□□□ -2.03
CSDE1-211ENST00000525970 SIPA1L1O43166 1804 aa2.34□□□□□ -2.03
CSDE1-211ENST00000525970 A0A087WUU8 490 aa2.34□□□□□ -2.03
CSDE1-211ENST00000525970 C17orf51A8MQB3 221 aa2.34□□□□□ -2.03
CSDE1-211ENST00000525970 PSCAO43653 123 aa2.34□□□□□ -2.03
CSDE1-211ENST00000525970 NDUFB2O95178 105 aa2.34□□□□□ -2.03
CSDE1-211ENST00000525970 IGLV3-19P01714 112 aa2.34□□□□□ -2.03
CSDE1-211ENST00000525970 RNASE2P10153 161 aaKnown RBP2.34□□□□□ -2.03
CSDE1-211ENST00000525970 CD79AP11912 226 aa2.34□□□□□ -2.03
CSDE1-211ENST00000525970 SLC25A16P16260 332 aa2.34□□□□□ -2.03
CSDE1-211ENST00000525970 CRHBPP24387 322 aa2.34□□□□□ -2.03
CSDE1-211ENST00000525970 TBPL1P62380 186 aa2.34□□□□□ -2.03
CSDE1-211ENST00000525970 DEFB134Q4QY38 66 aa2.34□□□□□ -2.03
CSDE1-211ENST00000525970 TMEM97Q5BJF2 176 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms