RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 LDLRAD1Q5T700 205 aa11.77□□□□□ -0.53
LRRK1-202ENST00000525284 CLEC2AQ6UVW9 174 aa11.77□□□□□ -0.53
LRRK1-202ENST00000525284 CENPVQ7Z7K6 275 aaPredicted RBP11.77□□□□□ -0.53
LRRK1-202ENST00000525284 GATD1Q8NB37 220 aa11.77□□□□□ -0.53
LRRK1-202ENST00000525284 NPC2P61916 151 aa11.77□□□□□ -0.53
LRRK1-202ENST00000525284 LINC00305Q7Z4B0 112 aa11.77□□□□□ -0.53
LRRK1-202ENST00000525284 MS4A6AQ9H2W1 248 aa11.77□□□□□ -0.53
LRRK1-202ENST00000525284 MBD1Q9UIS9 605 aaPredicted RBP11.77□□□□□ -0.53
LRRK1-202ENST00000525284 CD8AP01732 235 aa11.77□□□□□ -0.53
LRRK1-202ENST00000525284 RPL32P62910 135 aaKnown RBP11.77□□□□□ -0.53
LRRK1-202ENST00000525284 MSRB3Q8IXL7 192 aa11.77□□□□□ -0.53
LRRK1-202ENST00000525284 ZNF688P0C7X2 276 aa11.76□□□□□ -0.53
LRRK1-202ENST00000525284 RNF182Q8N6D2 247 aa11.76□□□□□ -0.53
LRRK1-202ENST00000525284 APCDD1LQ8NCL9 501 aa11.76□□□□□ -0.53
LRRK1-202ENST00000525284 ORAOV1Q8WV07 137 aa11.76□□□□□ -0.53
LRRK1-202ENST00000525284 PROB1E7EW31 1015 aa11.76□□□□□ -0.53
LRRK1-202ENST00000525284 S100A7L2Q5SY68 101 aa11.76□□□□□ -0.53
LRRK1-202ENST00000525284 ABHD12Q8N2K0 398 aa11.76□□□□□ -0.53
LRRK1-202ENST00000525284 IGHV3-64A0A075B6Q5 118 aa11.76□□□□□ -0.53
LRRK1-202ENST00000525284 IGHV3OR16-10A0A075B7F0 116 aa11.76□□□□□ -0.53
LRRK1-202ENST00000525284 C16orf97H3BN30 126 aa11.76□□□□□ -0.53
LRRK1-202ENST00000525284 PGLYRP1O75594 196 aaPredicted RBP11.76□□□□□ -0.53
LRRK1-202ENST00000525284 HOXB3P14651 431 aaPredicted RBP11.76□□□□□ -0.53
LRRK1-202ENST00000525284 RSPO2Q6UXX9 243 aaPredicted RBP11.76□□□□□ -0.53
LRRK1-202ENST00000525284 CT55Q8WUE5 264 aa11.76□□□□□ -0.53
LRRK1-202ENST00000525284 MARS2Q96GW9 593 aaKnown RBP11.76□□□□□ -0.53
LRRK1-202ENST00000525284 R3HDMLQ9H3Y0 253 aa11.76□□□□□ -0.53
LRRK1-202ENST00000525284 Q6ZS52 159 aa11.76□□□□□ -0.53
LRRK1-202ENST00000525284 SELENOHQ8IZQ5 122 aaKnown RBP11.76□□□□□ -0.53
LRRK1-202ENST00000525284 LEAP2Q969E1 77 aa11.76□□□□□ -0.53
LRRK1-202ENST00000525284 PKIBQ9C010 78 aa11.76□□□□□ -0.53
LRRK1-202ENST00000525284 SEMA5BQ9P283 1151 aa11.76□□□□□ -0.53
LRRK1-202ENST00000525284 GCHFRP30047 84 aa11.76□□□□□ -0.53
LRRK1-202ENST00000525284 RNASE4P34096 147 aaKnown RBP11.76□□□□□ -0.53
LRRK1-202ENST00000525284 TIMM23BQ5SRD1 257 aa11.76□□□□□ -0.53
LRRK1-202ENST00000525284 RBM38Q9H0Z9 239 aaKnown RBP11.76□□□□□ -0.53
LRRK1-202ENST00000525284 CALYQ9NYX4 217 aa11.76□□□□□ -0.53
LRRK1-202ENST00000525284 HMGA2P52926 109 aa11.75□□□□□ -0.53
LRRK1-202ENST00000525284 FUT5Q11128 374 aa11.75□□□□□ -0.53
LRRK1-202ENST00000525284 TRA2AQ13595 282 aaKnown RBP eCLIP11.75□□□□□ -0.53
LRRK1-202ENST00000525284 RTN4RL2Q86UN3 420 aa11.75□□□□□ -0.53
LRRK1-202ENST00000525284 EEF1AKMT3Q96AZ1 226 aa11.75□□□□□ -0.53
LRRK1-202ENST00000525284 LAMTOR3Q9UHA4 124 aa11.75□□□□□ -0.53
LRRK1-202ENST00000525284 TRGV2A0A075B6R0 118 aa11.75□□□□□ -0.53
LRRK1-202ENST00000525284 OR2H2O95918 312 aa11.75□□□□□ -0.53
LRRK1-202ENST00000525284 CD69Q07108 199 aa11.75□□□□□ -0.53
LRRK1-202ENST00000525284 TOGARAM1Q9Y4F4 1720 aa11.75□□□□□ -0.53
LRRK1-202ENST00000525284 MGST3O14880 152 aa11.75□□□□□ -0.53
LRRK1-202ENST00000525284 NUTF2P61970 127 aaKnown RBP11.75□□□□□ -0.53
LRRK1-202ENST00000525284 GAGE13Q4V321 117 aa11.75□□□□□ -0.53
LRRK1-202ENST00000525284 NPIPB3Q92617 1050 aa11.75□□□□□ -0.53
LRRK1-202ENST00000525284 WDYHV1Q96HA8 205 aa11.75□□□□□ -0.53
LRRK1-202ENST00000525284 NINQ8N4C6 2090 aa11.75□□□□□ -0.53
LRRK1-202ENST00000525284 MYH14Q7Z406 1995 aaKnown RBP11.75□□□□□ -0.53
LRRK1-202ENST00000525284 TMEM42Q69YG0 159 aa11.75□□□□□ -0.53
LRRK1-202ENST00000525284 INO80CQ6PI98 192 aaPredicted RBP11.75□□□□□ -0.53
LRRK1-202ENST00000525284 PLSCR4Q9NRQ2 329 aa11.75□□□□□ -0.53
LRRK1-202ENST00000525284 LTBP3Q9NS15 1303 aa11.74□□□□□ -0.53
LRRK1-202ENST00000525284 CCL21O00585 134 aa11.74□□□□□ -0.53
LRRK1-202ENST00000525284 TOMM40O96008 361 aa11.74□□□□□ -0.53
LRRK1-202ENST00000525284 TMEM74BQ9NUR3 256 aa11.74□□□□□ -0.53
LRRK1-202ENST00000525284 ST6GALNAC2Q9UJ37 374 aa11.74□□□□□ -0.53
LRRK1-202ENST00000525284 S4R3C0 116 aa11.74□□□□□ -0.53
LRRK1-202ENST00000525284 ERVH48-1M5A8F1 160 aa11.74□□□□□ -0.53
LRRK1-202ENST00000525284 ATG4DQ86TL0 474 aaPredicted RBP11.74□□□□□ -0.53
LRRK1-202ENST00000525284 SPEM1Q8N4L4 309 aa11.74□□□□□ -0.53
LRRK1-202ENST00000525284 GCSAMQ8N6F7 178 aa11.74□□□□□ -0.53
LRRK1-202ENST00000525284 LINC01587Q99440 93 aa11.74□□□□□ -0.53
LRRK1-202ENST00000525284 BCORQ6W2J9 1755 aa11.74□□□□□ -0.53
LRRK1-202ENST00000525284 BTAF1O14981 1849 aa11.74□□□□□ -0.53
LRRK1-202ENST00000525284 MPV17P39210 176 aa11.74□□□□□ -0.53
LRRK1-202ENST00000525284 CLDND2Q8NHS1 167 aa11.74□□□□□ -0.53
LRRK1-202ENST00000525284 YAE1D1Q9NRH1 226 aa11.74□□□□□ -0.53
LRRK1-202ENST00000525284 SELENOKQ9Y6D0 94 aa11.74□□□□□ -0.53
LRRK1-202ENST00000525284 MYO9BQ13459 2157 aa11.74□□□□□ -0.53
LRRK1-202ENST00000525284 VWC2LB2RUY7 222 aa11.74□□□□□ -0.53
LRRK1-202ENST00000525284 SPINT1O43278 529 aa11.74□□□□□ -0.53
LRRK1-202ENST00000525284 TNFRSF9Q07011 255 aa11.74□□□□□ -0.53
LRRK1-202ENST00000525284 MRPL52Q86TS9 123 aaKnown RBP11.74□□□□□ -0.53
LRRK1-202ENST00000525284 RASL10BQ96S79 203 aa11.74□□□□□ -0.53
LRRK1-202ENST00000525284 TRAV5A0A0B4J249 113 aa11.74□□□□□ -0.53
LRRK1-202ENST00000525284 A6NNC1 897 aa11.74□□□□□ -0.53
LRRK1-202ENST00000525284 C2CD4DB7Z1M9 353 aa11.74□□□□□ -0.53
LRRK1-202ENST00000525284 PTP4A3O75365 173 aa11.74□□□□□ -0.53
LRRK1-202ENST00000525284 SSBP2P81877 361 aaPredicted RBP11.74□□□□□ -0.53
LRRK1-202ENST00000525284 LGALS1P09382 135 aaKnown RBP11.73□□□□□ -0.53
LRRK1-202ENST00000525284 IL36BQ9NZH7 164 aa11.73□□□□□ -0.53
LRRK1-202ENST00000525284 A0A1W2PRX2 142 aa11.73□□□□□ -0.53
LRRK1-202ENST00000525284 TBR1Q16650 682 aa11.73□□□□□ -0.53
LRRK1-202ENST00000525284 PRDM13Q9H4Q3 707 aa11.73□□□□□ -0.53
LRRK1-202ENST00000525284 M0R2P5 195 aa11.73□□□□□ -0.53
LRRK1-202ENST00000525284 NAPSAO96009 420 aa11.73□□□□□ -0.53
LRRK1-202ENST00000525284 HSPE1P61604 102 aaKnown RBP11.73□□□□□ -0.53
LRRK1-202ENST00000525284 TMEM91Q6ZNR0 172 aa11.73□□□□□ -0.53
LRRK1-202ENST00000525284 ZNF625Q96I27 306 aaPredicted RBP11.73□□□□□ -0.53
LRRK1-202ENST00000525284 MRPL32Q9BYC8 188 aaKnown RBP11.73□□□□□ -0.53
LRRK1-202ENST00000525284 PQLC2LA1A4F0 135 aa11.73□□□□□ -0.53
LRRK1-202ENST00000525284 C2orf68Q2NKX9 166 aa11.73□□□□□ -0.53
LRRK1-202ENST00000525284 ZNF826PQ6ZT77 177 aa11.73□□□□□ -0.53
LRRK1-202ENST00000525284 MGST2Q99735 147 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms