RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 LSM4Q9Y4Z0 139 aaKnown RBP14.3□□□□□ -0.12
CAPN1-203ENST00000525013 TNFAIP8O95379 198 aa14.29□□□□□ -0.12
CAPN1-203ENST00000525013 IGLV2-14P01704 120 aa14.29□□□□□ -0.12
CAPN1-203ENST00000525013 SAA1P0DJI8 122 aaPredicted RBP14.29□□□□□ -0.12
CAPN1-203ENST00000525013 PTHLHP12272 177 aa14.29□□□□□ -0.12
CAPN1-203ENST00000525013 FCGR2CP31995 323 aa14.29□□□□□ -0.12
CAPN1-203ENST00000525013 HOGA1Q86XE5 327 aa14.29□□□□□ -0.12
CAPN1-203ENST00000525013 CROCCP3Q8IVE0 287 aa14.29□□□□□ -0.12
CAPN1-203ENST00000525013 SECTM1Q8WVN6 248 aa14.29□□□□□ -0.12
CAPN1-203ENST00000525013 SRSF12Q8WXF0 261 aaKnown RBP14.29□□□□□ -0.12
CAPN1-203ENST00000525013 OR4C12Q96R67 309 aa14.29□□□□□ -0.12
CAPN1-203ENST00000525013 HSD17B10Q99714 261 aaKnown RBP14.29□□□□□ -0.12
CAPN1-203ENST00000525013 ZNF430Q9H8G1 570 aaPredicted RBP14.29□□□□□ -0.12
CAPN1-203ENST00000525013 RANGRFQ9HD47 186 aaPredicted RBP14.29□□□□□ -0.12
CAPN1-203ENST00000525013 CREBL2O60519 120 aaPredicted RBP14.28□□□□□ -0.12
CAPN1-203ENST00000525013 TMEM127O75204 238 aa14.28□□□□□ -0.12
CAPN1-203ENST00000525013 AADACP22760 399 aa14.28□□□□□ -0.12
CAPN1-203ENST00000525013 DEFA5Q01523 94 aa14.28□□□□□ -0.12
CAPN1-203ENST00000525013 CDK10Q15131 360 aa14.28□□□□□ -0.12
CAPN1-203ENST00000525013 ACSM6Q6P461 480 aa14.28□□□□□ -0.12
CAPN1-203ENST00000525013 VKORC1L1Q8N0U8 176 aa14.28□□□□□ -0.12
CAPN1-203ENST00000525013 OR4S2Q8NH73 311 aa14.28□□□□□ -0.12
CAPN1-203ENST00000525013 YIPF6Q96EC8 236 aa14.28□□□□□ -0.12
CAPN1-203ENST00000525013 S100A16Q96FQ6 103 aaKnown RBP14.28□□□□□ -0.12
CAPN1-203ENST00000525013 TINAGL1Q9GZM7 467 aaPredicted RBP14.28□□□□□ -0.12
CAPN1-203ENST00000525013 DNAH9Q9NYC9 4486 aa14.28□□□□□ -0.12
CAPN1-203ENST00000525013 MEIS3P1A6NDR6 274 aa14.27□□□□□ -0.13
CAPN1-203ENST00000525013 ZP3P21754 424 aa14.27□□□□□ -0.13
CAPN1-203ENST00000525013 RPS19P39019 145 aaKnown RBP14.27□□□□□ -0.13
CAPN1-203ENST00000525013 OVCH2Q7RTZ1 564 aa14.27□□□□□ -0.13
CAPN1-203ENST00000525013 MMD2Q8IY49 270 aa14.27□□□□□ -0.13
CAPN1-203ENST00000525013 MFSD4AQ8N468 514 aa14.27□□□□□ -0.13
CAPN1-203ENST00000525013 OR13F1Q8NGS4 319 aa14.27□□□□□ -0.13
CAPN1-203ENST00000525013 GPHA2Q96T91 129 aa14.27□□□□□ -0.13
CAPN1-203ENST00000525013 ELOVL1Q9BW60 279 aa14.27□□□□□ -0.13
CAPN1-203ENST00000525013 TNFSF12O43508 249 aa14.26□□□□□ -0.13
CAPN1-203ENST00000525013 XRCC3O43542 346 aa14.26□□□□□ -0.13
CAPN1-203ENST00000525013 OR9G9P0C7N8 305 aa14.26□□□□□ -0.13
CAPN1-203ENST00000525013 CBX5P45973 191 aa14.26□□□□□ -0.13
CAPN1-203ENST00000525013 UBE2NLQ5JXB2 153 aa14.26□□□□□ -0.13
CAPN1-203ENST00000525013 ZNF66Q6ZN08 573 aa14.26□□□□□ -0.13
CAPN1-203ENST00000525013 SAMD12Q8N8I0 201 aa14.26□□□□□ -0.13
CAPN1-203ENST00000525013 OR6Q1Q8NGQ2 317 aa14.26□□□□□ -0.13
CAPN1-203ENST00000525013 USMG5Q96IX5 58 aa14.26□□□□□ -0.13
CAPN1-203ENST00000525013 SPIN2AQ99865 258 aa14.26□□□□□ -0.13
CAPN1-203ENST00000525013 SPIN2BQ9BPZ2 258 aa14.26□□□□□ -0.13
CAPN1-203ENST00000525013 IFT46Q9NQC8 304 aa14.26□□□□□ -0.13
CAPN1-203ENST00000525013 CCL28Q9NRJ3 127 aa14.26□□□□□ -0.13
CAPN1-203ENST00000525013 BRI3O95415 125 aa14.25□□□□□ -0.13
CAPN1-203ENST00000525013 PPYP01298 95 aa14.25□□□□□ -0.13
CAPN1-203ENST00000525013 SPNP16150 400 aa14.25□□□□□ -0.13
CAPN1-203ENST00000525013 FXYD4P59646 89 aa14.25□□□□□ -0.13
CAPN1-203ENST00000525013 EIF4EBP1Q13541 118 aaPredicted RBP14.25□□□□□ -0.13
CAPN1-203ENST00000525013 C10orf55Q5SWW7 151 aa14.25□□□□□ -0.13
CAPN1-203ENST00000525013 ADAD2Q8NCV1 583 aaKnown RBP14.25□□□□□ -0.13
CAPN1-203ENST00000525013 SNAPC3Q92966 411 aa14.25□□□□□ -0.13
CAPN1-203ENST00000525013 RSRP1Q9BUV0 290 aa14.25□□□□□ -0.13
CAPN1-203ENST00000525013 SLC5A7Q9GZV3 580 aa14.25□□□□□ -0.13
CAPN1-203ENST00000525013 TENM3Q9P273 2699 aa14.25□□□□□ -0.13
CAPN1-203ENST00000525013 OR2A4O95047 310 aa14.24□□□□□ -0.13
CAPN1-203ENST00000525013 PRH1P02810 166 aa14.24□□□□□ -0.13
CAPN1-203ENST00000525013 DYRK1AQ13627 763 aa14.24□□□□□ -0.13
CAPN1-203ENST00000525013 TMEM69Q5SWH9 247 aa14.24□□□□□ -0.13
CAPN1-203ENST00000525013 VSTM2AQ8TAG5 236 aa14.24□□□□□ -0.13
CAPN1-203ENST00000525013 OR2A7Q96R45 310 aa14.24□□□□□ -0.13
CAPN1-203ENST00000525013 ASCL2Q99929 193 aa14.24□□□□□ -0.13
CAPN1-203ENST00000525013 PEF1Q9UBV8 284 aaKnown RBP14.24□□□□□ -0.13
CAPN1-203ENST00000525013 SMAD5-AS1Q9Y6J3 95 aa14.24□□□□□ -0.13
CAPN1-203ENST00000525013 RBMXL2O75526 392 aaKnown RBP14.23□□□□□ -0.13
CAPN1-203ENST00000525013 HRASP01112 189 aa14.23□□□□□ -0.13
CAPN1-203ENST00000525013 NHLRC4P0CG21 123 aaPredicted RBP14.23□□□□□ -0.13
CAPN1-203ENST00000525013 KIR2DS2P43631 304 aa14.23□□□□□ -0.13
CAPN1-203ENST00000525013 BRWD1-AS2P59051 145 aa14.23□□□□□ -0.13
CAPN1-203ENST00000525013 RHOGP84095 191 aa14.23□□□□□ -0.13
CAPN1-203ENST00000525013 ZNF343Q6P1L6 599 aa14.23□□□□□ -0.13
CAPN1-203ENST00000525013 SSX9Q7RTT3 188 aa14.23□□□□□ -0.13
CAPN1-203ENST00000525013 HAPLN4Q86UW8 402 aa14.23□□□□□ -0.13
CAPN1-203ENST00000525013 ANKRD13BQ86YJ7 626 aa14.23□□□□□ -0.13
CAPN1-203ENST00000525013 OR5AP2Q8NGF4 316 aa14.23□□□□□ -0.13
CAPN1-203ENST00000525013 SULT1C2O00338 296 aa14.22□□□□□ -0.13
CAPN1-203ENST00000525013 KBTBD11O94819 623 aa14.22□□□□□ -0.13
CAPN1-203ENST00000525013 TRBV12-3P01733 135 aa14.22□□□□□ -0.13
CAPN1-203ENST00000525013 GP9P14770 177 aa14.22□□□□□ -0.13
CAPN1-203ENST00000525013 SYNJ2BPP57105 145 aa14.22□□□□□ -0.13
CAPN1-203ENST00000525013 HERV-K104P61576 105 aa14.22□□□□□ -0.13
CAPN1-203ENST00000525013 ATP5G2Q06055 141 aa14.22□□□□□ -0.13
CAPN1-203ENST00000525013 MSMO1Q15800 293 aa14.22□□□□□ -0.13
CAPN1-203ENST00000525013 TMEM17Q86X19 198 aa14.22□□□□□ -0.13
CAPN1-203ENST00000525013 SPAG16Q8N0X2 631 aa14.22□□□□□ -0.13
CAPN1-203ENST00000525013 ZBTB34Q8NCN2 500 aa14.22□□□□□ -0.13
CAPN1-203ENST00000525013 FYTTD1Q96QD9 318 aaKnown RBP14.22□□□□□ -0.13
CAPN1-203ENST00000525013 AKIP1Q9NQ31 210 aa14.22□□□□□ -0.13
CAPN1-203ENST00000525013 EHFQ9NZC4 300 aa14.22□□□□□ -0.13
CAPN1-203ENST00000525013 DPPA5A6NC42 116 aa14.21□□□□□ -0.13
CAPN1-203ENST00000525013 HMX3A6NHT5 357 aa14.21□□□□□ -0.13
CAPN1-203ENST00000525013 FAM223BA6NKX1 122 aa14.21□□□□□ -0.13
CAPN1-203ENST00000525013 RPL27AP46776 148 aaKnown RBP14.21□□□□□ -0.13
CAPN1-203ENST00000525013 TAS2R20P59543 309 aa14.21□□□□□ -0.13
CAPN1-203ENST00000525013 CATR1Q13166 79 aa14.21□□□□□ -0.13
CAPN1-203ENST00000525013 KLF5Q13887 457 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms