RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 IFNA6P05013 189 aa12.35□□□□□ -0.43
HIF3A-208ENST00000524533 SAA1P0DJI8 122 aaPredicted RBP12.35□□□□□ -0.43
HIF3A-208ENST00000524533 RAB3BP20337 219 aa12.35□□□□□ -0.43
HIF3A-208ENST00000524533 CDK10Q15131 360 aa12.35□□□□□ -0.43
HIF3A-208ENST00000524533 OR2K2Q8NGT1 345 aa12.35□□□□□ -0.43
HIF3A-208ENST00000524533 ZNF430Q9H8G1 570 aaPredicted RBP12.35□□□□□ -0.43
HIF3A-208ENST00000524533 NDUFB11Q9NX14 153 aa12.35□□□□□ -0.43
HIF3A-208ENST00000524533 CD81P60033 236 aa12.34□□□□□ -0.43
HIF3A-208ENST00000524533 ZNF45Q02386 682 aa12.34□□□□□ -0.43
HIF3A-208ENST00000524533 ATP5G2Q06055 141 aa12.34□□□□□ -0.43
HIF3A-208ENST00000524533 ARL6IP1Q15041 203 aa12.34□□□□□ -0.43
HIF3A-208ENST00000524533 KCTD9Q7L273 389 aa12.34□□□□□ -0.43
HIF3A-208ENST00000524533 MMD2Q8IY49 270 aa12.34□□□□□ -0.43
HIF3A-208ENST00000524533 ZNF645Q8N7E2 425 aa12.34□□□□□ -0.43
HIF3A-208ENST00000524533 SPIN2AQ99865 258 aa12.34□□□□□ -0.43
HIF3A-208ENST00000524533 SPIN2BQ9BPZ2 258 aa12.34□□□□□ -0.43
HIF3A-208ENST00000524533 DCUN1D5Q9BTE7 237 aa12.34□□□□□ -0.43
HIF3A-208ENST00000524533 ATG5Q9H1Y0 275 aa12.34□□□□□ -0.43
HIF3A-208ENST00000524533 PLEKHA3Q9HB20 300 aa12.34□□□□□ -0.43
HIF3A-208ENST00000524533 TRBV9A0A0B4J1U6 114 aa12.33□□□□□ -0.44
HIF3A-208ENST00000524533 J3QRK9 145 aa12.33□□□□□ -0.44
HIF3A-208ENST00000524533 FCGR3BO75015 233 aa12.33□□□□□ -0.44
HIF3A-208ENST00000524533 CD36P16671 472 aa12.33□□□□□ -0.44
HIF3A-208ENST00000524533 DTYMKP23919 212 aa12.33□□□□□ -0.44
HIF3A-208ENST00000524533 C10orf55Q5SWW7 151 aa12.33□□□□□ -0.44
HIF3A-208ENST00000524533 ADAMTSL5Q6ZMM2 481 aa12.33□□□□□ -0.44
HIF3A-208ENST00000524533 ELF5Q9UKW6 265 aaPredicted RBP12.33□□□□□ -0.44
HIF3A-208ENST00000524533 MRPS7Q9Y2R9 242 aaKnown RBP12.33□□□□□ -0.44
HIF3A-208ENST00000524533 PRELID3BQ9Y3B1 194 aa12.33□□□□□ -0.44
HIF3A-208ENST00000524533 CEPT1Q9Y6K0 416 aa12.33□□□□□ -0.44
HIF3A-208ENST00000524533 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.32□□□□□ -0.44
HIF3A-208ENST00000524533 TPPPO94811 219 aa12.32□□□□□ -0.44
HIF3A-208ENST00000524533 MECP2P51608 486 aaKnown RBP12.32□□□□□ -0.44
HIF3A-208ENST00000524533 CD300EQ496F6 205 aaPredicted RBP12.32□□□□□ -0.44
HIF3A-208ENST00000524533 OR2B11Q5JQS5 317 aa12.32□□□□□ -0.44
HIF3A-208ENST00000524533 SLC25A42Q86VD7 318 aa12.32□□□□□ -0.44
HIF3A-208ENST00000524533 LAX1Q8IWV1 398 aa12.32□□□□□ -0.44
HIF3A-208ENST00000524533 TTC9CQ8N5M4 171 aa12.32□□□□□ -0.44
HIF3A-208ENST00000524533 NECAP1Q8NC96 275 aa12.32□□□□□ -0.44
HIF3A-208ENST00000524533 DYNLRB2Q8TF09 96 aa12.32□□□□□ -0.44
HIF3A-208ENST00000524533 RETNQ9HD89 108 aa12.32□□□□□ -0.44
HIF3A-208ENST00000524533 BLOC1S6Q9UL45 172 aa12.32□□□□□ -0.44
HIF3A-208ENST00000524533 DNAH1Q9P2D7 4330 aa12.32□□□□□ -0.44
HIF3A-208ENST00000524533 TNCP24821 2201 aa12.31□□□□□ -0.44
HIF3A-208ENST00000524533 TRDV1A0A1B0GX56 115 aa12.31□□□□□ -0.44
HIF3A-208ENST00000524533 NFYAP23511 347 aaPredicted RBP12.31□□□□□ -0.44
HIF3A-208ENST00000524533 C15orf32Q32M92 178 aa12.31□□□□□ -0.44
HIF3A-208ENST00000524533 CDNFQ49AH0 187 aa12.31□□□□□ -0.44
HIF3A-208ENST00000524533 FAM209BQ5JX69 171 aa12.31□□□□□ -0.44
HIF3A-208ENST00000524533 C22orf42Q6IC83 251 aa12.31□□□□□ -0.44
HIF3A-208ENST00000524533 NR2C2APQ86WQ0 139 aa12.31□□□□□ -0.44
HIF3A-208ENST00000524533 KCTD12Q96CX2 325 aaKnown RBP12.31□□□□□ -0.44
HIF3A-208ENST00000524533 CNBD2Q96M20 576 aa12.31□□□□□ -0.44
HIF3A-208ENST00000524533 NEURL2Q9BR09 285 aa12.31□□□□□ -0.44
HIF3A-208ENST00000524533 ST6GALNAC5Q9BVH7 336 aa12.31□□□□□ -0.44
HIF3A-208ENST00000524533 VCX3BQ9H321 246 aa12.31□□□□□ -0.44
HIF3A-208ENST00000524533 SLC2A8Q9NY64 477 aa12.31□□□□□ -0.44
HIF3A-208ENST00000524533 RBMX2Q9Y388 322 aaKnown RBP12.31□□□□□ -0.44
HIF3A-208ENST00000524533 OR2W1Q9Y3N9 320 aa12.31□□□□□ -0.44
HIF3A-208ENST00000524533 SMIM30A4D0T7 59 aa12.3□□□□□ -0.44
HIF3A-208ENST00000524533 PPP5D1E7EU14 171 aa12.3□□□□□ -0.44
HIF3A-208ENST00000524533 OR2J3O76001 311 aa12.3□□□□□ -0.44
HIF3A-208ENST00000524533 SLC22A5O76082 557 aa12.3□□□□□ -0.44
HIF3A-208ENST00000524533 CTXN2P0C2S0 81 aa12.3□□□□□ -0.44
HIF3A-208ENST00000524533 RPL30P62888 115 aaKnown RBP12.3□□□□□ -0.44
HIF3A-208ENST00000524533 HACD4Q5VWC8 232 aa12.3□□□□□ -0.44
HIF3A-208ENST00000524533 IZUMO2Q6UXV1 221 aa12.3□□□□□ -0.44
HIF3A-208ENST00000524533 VKORC1L1Q8N0U8 176 aa12.3□□□□□ -0.44
HIF3A-208ENST00000524533 OR4S2Q8NH73 311 aa12.3□□□□□ -0.44
HIF3A-208ENST00000524533 NUDCD2Q8WVJ2 157 aa12.3□□□□□ -0.44
HIF3A-208ENST00000524533 FAM110AQ9BQ89 295 aa12.3□□□□□ -0.44
HIF3A-208ENST00000524533 OR51E2Q9H255 320 aa12.3□□□□□ -0.44
HIF3A-208ENST00000524533 ZNF257Q9Y2Q1 563 aa12.3□□□□□ -0.44
HIF3A-208ENST00000524533 DPPA5A6NC42 116 aa12.29□□□□□ -0.44
HIF3A-208ENST00000524533 HMX3A6NHT5 357 aa12.29□□□□□ -0.44
HIF3A-208ENST00000524533 TEX22C9J3V5 150 aa12.29□□□□□ -0.44
HIF3A-208ENST00000524533 KBTBD11O94819 623 aa12.29□□□□□ -0.44
HIF3A-208ENST00000524533 HLA-DQB1P01920 261 aa12.29□□□□□ -0.44
HIF3A-208ENST00000524533 GALP22466 123 aa12.29□□□□□ -0.44
HIF3A-208ENST00000524533 HSPA13P48723 471 aa12.29□□□□□ -0.44
HIF3A-208ENST00000524533 LINC00322Q6ZN03 302 aaPredicted RBP12.29□□□□□ -0.44
HIF3A-208ENST00000524533 VSTM2AQ8TAG5 236 aa12.29□□□□□ -0.44
HIF3A-208ENST00000524533 TCTEX1D2Q8WW35 142 aa12.29□□□□□ -0.44
HIF3A-208ENST00000524533 DCSTAMPQ9H295 470 aa12.29□□□□□ -0.44
HIF3A-208ENST00000524533 HIPK2Q9H2X6 1198 aa12.29□□□□□ -0.44
HIF3A-208ENST00000524533 EPPK1P58107 5090 aaKnown RBP12.28□□□□□ -0.44
HIF3A-208ENST00000524533 IGKV1D-13A0A0B4J2D9 117 aa12.28□□□□□ -0.44
HIF3A-208ENST00000524533 TMEM235A6NFC5 223 aa12.28□□□□□ -0.44
HIF3A-208ENST00000524533 C2orf70A6NJV1 201 aa12.28□□□□□ -0.44
HIF3A-208ENST00000524533 ZNF785A8K8V0 405 aa12.28□□□□□ -0.44
HIF3A-208ENST00000524533 NPIPB5A8MRT5 1133 aa12.28□□□□□ -0.44
HIF3A-208ENST00000524533 GGCTO75223 188 aaKnown RBP12.28□□□□□ -0.44
HIF3A-208ENST00000524533 IGLV2-14P01704 120 aa12.28□□□□□ -0.44
HIF3A-208ENST00000524533 HLA-AP01891 365 aaKnown RBP12.28□□□□□ -0.44
HIF3A-208ENST00000524533 CD7P09564 240 aa12.28□□□□□ -0.44
HIF3A-208ENST00000524533 IGKV1-13P0DP09 117 aa12.28□□□□□ -0.44
HIF3A-208ENST00000524533 EDN2P20800 178 aa12.28□□□□□ -0.44
HIF3A-208ENST00000524533 RPL27AP46776 148 aaKnown RBP12.28□□□□□ -0.44
HIF3A-208ENST00000524533 GUCA2BQ16661 112 aa12.28□□□□□ -0.44
HIF3A-208ENST00000524533 DEFB114Q30KQ6 69 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms