RNA–Protein interactions for RNA: ENST00000521580.2

SMIM12-206, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM12, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-206ENST00000521580 ITGB1BP1O14713 200 aa11.53□□□□□ -0.56
SMIM12-206ENST00000521580 SCAF4O95104 1147 aaKnown RBP11.53□□□□□ -0.56
SMIM12-206ENST00000521580 TMEM41BQ5BJD5 291 aa11.53□□□□□ -0.56
SMIM12-206ENST00000521580 CLDND2Q8NHS1 167 aa11.53□□□□□ -0.56
SMIM12-206ENST00000521580 RHOVQ96L33 236 aa11.53□□□□□ -0.56
SMIM12-206ENST00000521580 SMDT1Q9H4I9 107 aa11.53□□□□□ -0.56
SMIM12-206ENST00000521580 TMEM106BQ9NUM4 274 aa11.53□□□□□ -0.56
SMIM12-206ENST00000521580 MLXQ9UH92 298 aa11.53□□□□□ -0.56
SMIM12-206ENST00000521580 RPUSD1Q9UJJ7 312 aaKnown RBP11.53□□□□□ -0.56
SMIM12-206ENST00000521580 THBS3P49746 956 aa11.52□□□□□ -0.56
SMIM12-206ENST00000521580 SPCS3P61009 180 aa11.52□□□□□ -0.56
SMIM12-206ENST00000521580 ICAM4Q14773 271 aa11.52□□□□□ -0.56
SMIM12-206ENST00000521580 ZNF726P1Q15940 193 aa11.52□□□□□ -0.56
SMIM12-206ENST00000521580 NCMAPQ5T1S8 102 aa11.52□□□□□ -0.56
SMIM12-206ENST00000521580 ZNF709Q8N972 641 aa11.52□□□□□ -0.56
SMIM12-206ENST00000521580 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.52□□□□□ -0.57
SMIM12-206ENST00000521580 PMS2P5A8MQ11 134 aa11.52□□□□□ -0.57
SMIM12-206ENST00000521580 CD3EP07766 207 aa11.52□□□□□ -0.57
SMIM12-206ENST00000521580 CCL3L1P16619 93 aa11.52□□□□□ -0.57
SMIM12-206ENST00000521580 TFF3Q07654 80 aa11.52□□□□□ -0.57
SMIM12-206ENST00000521580 HFEQ30201 348 aa11.52□□□□□ -0.57
SMIM12-206ENST00000521580 SSX7Q7RTT5 188 aa11.52□□□□□ -0.57
SMIM12-206ENST00000521580 ZNF383Q8NA42 475 aa11.52□□□□□ -0.57
SMIM12-206ENST00000521580 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.52□□□□□ -0.57
SMIM12-206ENST00000521580 DDB2Q92466 427 aa11.52□□□□□ -0.57
SMIM12-206ENST00000521580 SLC39A9Q9NUM3 307 aa11.52□□□□□ -0.57
SMIM12-206ENST00000521580 LINC00312Q9Y6C7 94 aa11.52□□□□□ -0.57
SMIM12-206ENST00000521580 RAI1Q7Z5J4 1906 aaPredicted RBP11.52□□□□□ -0.57
SMIM12-206ENST00000521580 SMCO3A2RU48 225 aa11.52□□□□□ -0.57
SMIM12-206ENST00000521580 C15orf62A8K5M9 175 aa11.52□□□□□ -0.57
SMIM12-206ENST00000521580 CCL21O00585 134 aa11.52□□□□□ -0.57
SMIM12-206ENST00000521580 SRP19P09132 144 aaKnown RBP11.52□□□□□ -0.57
SMIM12-206ENST00000521580 PLA2G5P39877 138 aa11.52□□□□□ -0.57
SMIM12-206ENST00000521580 SMUG1Q53HV7 270 aa11.52□□□□□ -0.57
SMIM12-206ENST00000521580 ZNF506Q5JVG8 444 aa11.52□□□□□ -0.57
SMIM12-206ENST00000521580 CYB561D1Q8N8Q1 229 aa11.52□□□□□ -0.57
SMIM12-206ENST00000521580 CORO2AQ92828 525 aa11.52□□□□□ -0.57
SMIM12-206ENST00000521580 ZNF251Q9BRH9 671 aa11.52□□□□□ -0.57
SMIM12-206ENST00000521580 PARD6GQ9BYG4 376 aaPredicted RBP11.52□□□□□ -0.57
SMIM12-206ENST00000521580 HIPK2Q9H2X6 1198 aa11.52□□□□□ -0.57
SMIM12-206ENST00000521580 GAL3ST2Q9H3Q3 398 aa11.52□□□□□ -0.57
SMIM12-206ENST00000521580 ATRXP46100 2492 aa11.52□□□□□ -0.57
SMIM12-206ENST00000521580 MAP1LC3B2A6NCE7 125 aa11.51□□□□□ -0.57
SMIM12-206ENST00000521580 HMGB3O15347 200 aaKnown RBP11.51□□□□□ -0.57
SMIM12-206ENST00000521580 HOXA1P49639 335 aaPredicted RBP11.51□□□□□ -0.57
SMIM12-206ENST00000521580 RELBQ01201 579 aa11.51□□□□□ -0.57
SMIM12-206ENST00000521580 DMRTC2Q8IXT2 367 aaPredicted RBP11.51□□□□□ -0.57
SMIM12-206ENST00000521580 ZNF439Q8NDP4 499 aa11.51□□□□□ -0.57
SMIM12-206ENST00000521580 HINT2Q9BX68 163 aa11.51□□□□□ -0.57
SMIM12-206ENST00000521580 MAP1LC3BQ9GZQ8 125 aa11.51□□□□□ -0.57
SMIM12-206ENST00000521580 MS4A5Q9H3V2 200 aa11.51□□□□□ -0.57
SMIM12-206ENST00000521580 UNKLQ9H9P5 680 aaKnown RBP11.51□□□□□ -0.57
SMIM12-206ENST00000521580 GAB2Q9UQC2 676 aa11.51□□□□□ -0.57
SMIM12-206ENST00000521580 LYPD2Q6UXB3 125 aa11.51□□□□□ -0.57
SMIM12-206ENST00000521580 ADTRPQ96IZ2 230 aa11.51□□□□□ -0.57
SMIM12-206ENST00000521580 HCFC1P51610 2035 aa11.51□□□□□ -0.57
SMIM12-206ENST00000521580 TRAV1-1A0A0B4J248 108 aa11.51□□□□□ -0.57
SMIM12-206ENST00000521580 FAM90A9PA6NNJ1 464 aa11.51□□□□□ -0.57
SMIM12-206ENST00000521580 NDUFB3O43676 98 aa11.51□□□□□ -0.57
SMIM12-206ENST00000521580 PLAUP00749 431 aa11.51□□□□□ -0.57
SMIM12-206ENST00000521580 LHX4Q969G2 390 aa11.51□□□□□ -0.57
SMIM12-206ENST00000521580 RPP30P78346 268 aaKnown RBP11.5□□□□□ -0.57
SMIM12-206ENST00000521580 FFAR4Q5NUL3 377 aa11.5□□□□□ -0.57
SMIM12-206ENST00000521580 SP5Q6BEB4 398 aaPredicted RBP11.5□□□□□ -0.57
SMIM12-206ENST00000521580 ACSM6Q6P461 480 aa11.5□□□□□ -0.57
SMIM12-206ENST00000521580 ABHD12Q8N2K0 398 aa11.5□□□□□ -0.57
SMIM12-206ENST00000521580 ISOC2Q96AB3 205 aa11.5□□□□□ -0.57
SMIM12-206ENST00000521580 ZNF714Q96N38 554 aa11.5□□□□□ -0.57
SMIM12-206ENST00000521580 SLC25A22Q9H936 323 aa11.5□□□□□ -0.57
SMIM12-206ENST00000521580 TCF19Q9Y242 345 aa11.5□□□□□ -0.57
SMIM12-206ENST00000521580 IGKV1D-33P01593 117 aa11.5□□□□□ -0.57
SMIM12-206ENST00000521580 IGKV1-33P01594 117 aa11.5□□□□□ -0.57
SMIM12-206ENST00000521580 HSPB1P04792 205 aaKnown RBP11.5□□□□□ -0.57
SMIM12-206ENST00000521580 GRNP28799 593 aaKnown RBP11.5□□□□□ -0.57
SMIM12-206ENST00000521580 GNB2P62879 340 aa11.5□□□□□ -0.57
SMIM12-206ENST00000521580 KHDC3LQ587J8 217 aa11.5□□□□□ -0.57
SMIM12-206ENST00000521580 LRRC10Q5BKY1 277 aa11.5□□□□□ -0.57
SMIM12-206ENST00000521580 OR4A47Q6IF82 309 aa11.5□□□□□ -0.57
SMIM12-206ENST00000521580 RPP25LQ8N5L8 163 aaKnown RBP11.5□□□□□ -0.57
SMIM12-206ENST00000521580 MBD3L1Q8WWY6 194 aa11.5□□□□□ -0.57
SMIM12-206ENST00000521580 ZCCHC14Q8WYQ9 949 aaKnown RBP11.5□□□□□ -0.57
SMIM12-206ENST00000521580 TIMM9Q9Y5J7 89 aa11.5□□□□□ -0.57
SMIM12-206ENST00000521580 IFNA4P05014 189 aa11.5□□□□□ -0.57
SMIM12-206ENST00000521580 APOBEC3AP31941 199 aaPredicted RBP11.5□□□□□ -0.57
SMIM12-206ENST00000521580 CA7P43166 264 aa11.5□□□□□ -0.57
SMIM12-206ENST00000521580 KLRB1Q12918 225 aa11.5□□□□□ -0.57
SMIM12-206ENST00000521580 SLC25A48Q6ZT89 311 aaKnown RBP11.5□□□□□ -0.57
SMIM12-206ENST00000521580 IQCF2Q8IXL9 164 aa11.5□□□□□ -0.57
SMIM12-206ENST00000521580 NPCDR1Q9BY65 106 aa11.5□□□□□ -0.57
SMIM12-206ENST00000521580 SLC35D1Q9NTN3 355 aa11.5□□□□□ -0.57
SMIM12-206ENST00000521580 DSCAML1Q8TD84 2053 aa11.49□□□□□ -0.57
SMIM12-206ENST00000521580 LOC102723971A0A1B0GUV8 181 aa11.49□□□□□ -0.57
SMIM12-206ENST00000521580 RAB11AP62491 216 aa11.49□□□□□ -0.57
SMIM12-206ENST00000521580 MEF2CQ06413 473 aaPredicted RBP11.49□□□□□ -0.57
SMIM12-206ENST00000521580 TMEM200BQ69YZ2 307 aa11.49□□□□□ -0.57
SMIM12-206ENST00000521580 LINC00574Q9H8X3 128 aa11.49□□□□□ -0.57
SMIM12-206ENST00000521580 CISD1Q9NZ45 108 aaKnown RBP11.49□□□□□ -0.57
SMIM12-206ENST00000521580 H3BQ15 152 aa11.49□□□□□ -0.57
SMIM12-206ENST00000521580 RRHO14718 337 aa11.49□□□□□ -0.57
SMIM12-206ENST00000521580 HRASP01112 189 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms