RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 SHBQ15464 509 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 PLPPR5Q32ZL2 321 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 ACTL10Q5JWF8 245 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 TEX43Q6ZNM6 134 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 ZNF439Q8NDP4 499 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 BLNKQ8WV28 456 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 DNASE2BQ8WZ79 361 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 ZDHHC16Q969W1 377 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 MRPL18Q9H0U6 180 aaKnown RBP8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 MOB1AQ9H8S9 216 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 FBXL7Q9UJT9 491 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 ACTL6BO94805 426 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 FASLGP48023 281 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 SRPXP78539 464 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 CRIP3Q6Q6R5 217 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 ZNF525Q8N782 197 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 OR1L3Q8NH93 324 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 UBE2ZQ9H832 354 aaPredicted RBP8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 PNRC2Q9NPJ4 139 aaKnown RBP8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 CLCF1Q9UBD9 225 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 TNRC6AQ8NDV7 1962 aaKnown RBP8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 PRR19A6NJB7 356 aa8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 PGLYRP1O75594 196 aaPredicted RBP8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 IGKV3-11P04433 115 aa8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 ZNF32P17041 273 aa8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 LINC00696Q6ZRV3 163 aa8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 NHLRC2Q8NBF2 726 aa8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 SSMEM1Q8WWF3 244 aa8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 KLHDC7BQ96G42 594 aa8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 ANAPC10Q9UM13 185 aa8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 TSSC4Q9Y5U2 329 aaPredicted RBP8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 IGHV1-69-2A0A0G2JMI3 117 aa8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 CRYGCP07315 174 aa8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 G6PCP35575 357 aa8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 SLC23A3Q6PIS1 610 aa8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 HAPLN4Q86UW8 402 aa8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 TAF15Q92804 592 aaKnown RBP eCLIP8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 LRRC61Q9BV99 259 aa8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 MRPL13Q9BYD1 178 aaKnown RBP8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 SMPXQ9UHP9 88 aa8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 MMP17Q9ULZ9 603 aa8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 KIR2DS5A0A0G2JLQ3 304 aa8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 A0A0G2JNG1 304 aa8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 A0A1B0GW64 132 aa8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 KIR2DS3K7RE56 304 aa8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 HNRNPA1P09651 372 aaKnown RBP eCLIP8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 SRYQ05066 204 aa8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 KIR2DS5Q14953 304 aa8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 SPATA46Q5T0L3 261 aa8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 STPG3Q8N7X2 389 aa8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 PP6455Q8WZ26 134 aa8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 C19orf24Q9BVV8 132 aa8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 DEPPQ9NTK1 212 aa8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 PGPEP1Q9NXJ5 209 aa8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 TECRQ9NZ01 308 aaKnown RBP8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 ZNF835Q9Y2P0 537 aa8.56□□□□□ -1.04
PDGFRB-207ENST00000520579 DHHO43323 396 aa8.55□□□□□ -1.04
PDGFRB-207ENST00000520579 ZNF253O75346 499 aa8.55□□□□□ -1.04
PDGFRB-207ENST00000520579 SYNGR4O95473 234 aa8.55□□□□□ -1.04
PDGFRB-207ENST00000520579 GATA3P23771 443 aa8.55□□□□□ -1.04
PDGFRB-207ENST00000520579 KIR2DL1P43626 348 aaPredicted RBP8.55□□□□□ -1.04
PDGFRB-207ENST00000520579 CDIPTO14735 213 aa8.55□□□□□ -1.04
PDGFRB-207ENST00000520579 TNFSF11O14788 317 aa8.55□□□□□ -1.04
PDGFRB-207ENST00000520579 LINC01565O15544 149 aa8.55□□□□□ -1.04
PDGFRB-207ENST00000520579 TFF1P04155 84 aa8.55□□□□□ -1.04
PDGFRB-207ENST00000520579 NPPCP23582 126 aa8.55□□□□□ -1.04
PDGFRB-207ENST00000520579 ID3Q02535 119 aa8.55□□□□□ -1.04
PDGFRB-207ENST00000520579 FAM71F2Q6NXP2 309 aa8.55□□□□□ -1.04
PDGFRB-207ENST00000520579 VCX2Q9H322 139 aa8.55□□□□□ -1.04
PDGFRB-207ENST00000520579 FBLN5Q9UBX5 448 aa8.55□□□□□ -1.04
PDGFRB-207ENST00000520579 DEFB108AA8MXU0 73 aa8.55□□□□□ -1.04
PDGFRB-207ENST00000520579 USF1P22415 310 aaPredicted RBP8.55□□□□□ -1.04
PDGFRB-207ENST00000520579 CA6P23280 308 aa8.55□□□□□ -1.04
PDGFRB-207ENST00000520579 UQCRFS1P47985 274 aa8.55□□□□□ -1.04
PDGFRB-207ENST00000520579 TMPRSS3P57727 454 aa8.55□□□□□ -1.04
PDGFRB-207ENST00000520579 HSD52Q0P140 79 aa8.55□□□□□ -1.04
PDGFRB-207ENST00000520579 SLC25A47Q6Q0C1 308 aa8.55□□□□□ -1.04
PDGFRB-207ENST00000520579 YRDCQ86U90 279 aaKnown RBP8.55□□□□□ -1.04
PDGFRB-207ENST00000520579 CISD2Q8N5K1 135 aaKnown RBP8.55□□□□□ -1.04
PDGFRB-207ENST00000520579 WDYHV1Q96HA8 205 aa8.55□□□□□ -1.04
PDGFRB-207ENST00000520579 ELOVL5Q9NYP7 299 aa8.55□□□□□ -1.04
PDGFRB-207ENST00000520579 PPIAL4EA0A075B759 164 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 PPIAL4DF5H284 164 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 TNFSF15O95150 251 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 CA1P00915 261 aaPredicted RBP8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 FAM87AP0C7U9 286 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 PPIAL4FP0DN26 164 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 HLA-DRB5Q30154 266 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 MRAP2Q96G30 205 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 TM2D1Q9BX74 207 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 CFHR5Q9BXR6 569 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 SCO2A0A1W2PP80 73 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 BRI3O95415 125 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 CLDN14O95500 239 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 IGLV3-21P80748 117 aaPredicted RBP8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 COA6Q5JTJ3 125 aaKnown RBP8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 C1orf174Q8IYL3 243 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 FGFBP3Q8TAT2 258 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 PMCHL2Q9BQD1 86 aa8.54□□□□□ -1.04
PDGFRB-207ENST00000520579 WDR61Q9GZS3 305 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms