RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 CDS2O95674 445 aa14.2□□□□□ -0.14
SDC2-205ENST00000520233 DHFRP00374 187 aa14.2□□□□□ -0.14
SDC2-205ENST00000520233 IGLV2-23P01705 113 aa14.2□□□□□ -0.14
SDC2-205ENST00000520233 NQO2P16083 231 aa14.2□□□□□ -0.14
SDC2-205ENST00000520233 CNTFRP26992 372 aa14.2□□□□□ -0.14
SDC2-205ENST00000520233 F2RL1P55085 397 aa14.2□□□□□ -0.14
SDC2-205ENST00000520233 SRPXP78539 464 aa14.2□□□□□ -0.14
SDC2-205ENST00000520233 DHRS2Q13268 280 aa14.2□□□□□ -0.14
SDC2-205ENST00000520233 PSG5Q15238 335 aa14.2□□□□□ -0.14
SDC2-205ENST00000520233 MINDY2Q8NBR6 621 aa14.2□□□□□ -0.14
SDC2-205ENST00000520233 IL22RA2Q969J5 263 aa14.2□□□□□ -0.14
SDC2-205ENST00000520233 TMEM56Q96MV1 263 aa14.2□□□□□ -0.14
SDC2-205ENST00000520233 DUX5Q96PT3 197 aa14.2□□□□□ -0.14
SDC2-205ENST00000520233 RAB18Q9NP72 206 aa14.2□□□□□ -0.14
SDC2-205ENST00000520233 KIAA1456Q9P272 454 aa14.2□□□□□ -0.14
SDC2-205ENST00000520233 MOB4Q9Y3A3 225 aa14.2□□□□□ -0.14
SDC2-205ENST00000520233 TMEM56-RWDD3S4R434 201 aa14.2□□□□□ -0.14
SDC2-205ENST00000520233 FN1P02751 2386 aaKnown RBP14.2□□□□□ -0.14
SDC2-205ENST00000520233 SVEP1Q4LDE5 3571 aa14.19□□□□□ -0.14
SDC2-205ENST00000520233 NCBP2LA6PVI3 153 aaKnown RBP14.19□□□□□ -0.14
SDC2-205ENST00000520233 RRHO14718 337 aa14.19□□□□□ -0.14
SDC2-205ENST00000520233 FGF16O43320 207 aa14.19□□□□□ -0.14
SDC2-205ENST00000520233 CHST1O43916 411 aa14.19□□□□□ -0.14
SDC2-205ENST00000520233 IGKV1-39P01597 117 aa14.19□□□□□ -0.14
SDC2-205ENST00000520233 IGKV1D-39P04432 117 aa14.19□□□□□ -0.14
SDC2-205ENST00000520233 UBE2KP61086 200 aa14.19□□□□□ -0.14
SDC2-205ENST00000520233 POU2AF1Q16633 256 aa14.19□□□□□ -0.14
SDC2-205ENST00000520233 VMA21Q3ZAQ7 101 aa14.19□□□□□ -0.14
SDC2-205ENST00000520233 CASTOR1Q8WTX7 329 aa14.19□□□□□ -0.14
SDC2-205ENST00000520233 CHPT1Q8WUD6 406 aa14.19□□□□□ -0.14
SDC2-205ENST00000520233 R3HDM4Q96D70 268 aa14.19□□□□□ -0.14
SDC2-205ENST00000520233 RHOVQ96L33 236 aa14.19□□□□□ -0.14
SDC2-205ENST00000520233 ANK3Q12955 4377 aaKnown RBP14.18□□□□□ -0.14
SDC2-205ENST00000520233 PIGBOS1A0A0B4J2F0 54 aa14.18□□□□□ -0.14
SDC2-205ENST00000520233 M0QZK8 103 aa14.18□□□□□ -0.14
SDC2-205ENST00000520233 GPR137BO60478 399 aa14.18□□□□□ -0.14
SDC2-205ENST00000520233 ATG12O94817 140 aa14.18□□□□□ -0.14
SDC2-205ENST00000520233 DUS4LO95620 317 aaKnown RBP14.18□□□□□ -0.14
SDC2-205ENST00000520233 RNASE1P07998 156 aaKnown RBP14.18□□□□□ -0.14
SDC2-205ENST00000520233 UBA52P62987 128 aaKnown RBP14.18□□□□□ -0.14
SDC2-205ENST00000520233 ANKRD55Q3KP44 614 aa14.18□□□□□ -0.14
SDC2-205ENST00000520233 ZNF695Q8IW36 515 aa14.18□□□□□ -0.14
SDC2-205ENST00000520233 SELENOHQ8IZQ5 122 aaKnown RBP14.18□□□□□ -0.14
SDC2-205ENST00000520233 LGI3Q8N145 548 aa14.18□□□□□ -0.14
SDC2-205ENST00000520233 FAM71E2Q8N5Q1 922 aa14.18□□□□□ -0.14
SDC2-205ENST00000520233 LRTM2Q8N967 370 aa14.18□□□□□ -0.14
SDC2-205ENST00000520233 Q8N9W7 124 aa14.18□□□□□ -0.14
SDC2-205ENST00000520233 TEX45Q8NA69 505 aa14.18□□□□□ -0.14
SDC2-205ENST00000520233 OR52B4Q8NGK2 314 aa14.18□□□□□ -0.14
SDC2-205ENST00000520233 LHFPL5Q8TAF8 219 aa14.18□□□□□ -0.14
SDC2-205ENST00000520233 ZNF431Q8TF32 576 aaPredicted RBP14.18□□□□□ -0.14
SDC2-205ENST00000520233 RBPMSQ93062 196 aaKnown RBP14.18□□□□□ -0.14
SDC2-205ENST00000520233 SEC22AQ96IW7 307 aa14.18□□□□□ -0.14
SDC2-205ENST00000520233 SEC22CQ9BRL7 303 aa14.18□□□□□ -0.14
SDC2-205ENST00000520233 GPN1Q9HCN4 374 aaPredicted RBP14.18□□□□□ -0.14
SDC2-205ENST00000520233 PRR13Q9NZ81 148 aa14.18□□□□□ -0.14
SDC2-205ENST00000520233 MARCH11A6NNE9 402 aa14.17□□□□□ -0.14
SDC2-205ENST00000520233 SLC25A17O43808 307 aa14.17□□□□□ -0.14
SDC2-205ENST00000520233 KRASP01116 189 aa14.17□□□□□ -0.14
SDC2-205ENST00000520233 CRYGBP07316 175 aa14.17□□□□□ -0.14
SDC2-205ENST00000520233 G6PCP35575 357 aa14.17□□□□□ -0.14
SDC2-205ENST00000520233 ERVK-16P61578 105 aa14.17□□□□□ -0.14
SDC2-205ENST00000520233 TMEM268Q5VZI3 342 aa14.17□□□□□ -0.14
SDC2-205ENST00000520233 SSX9Q7RTT3 188 aa14.17□□□□□ -0.14
SDC2-205ENST00000520233 VKORC1L1Q8N0U8 176 aa14.17□□□□□ -0.14
SDC2-205ENST00000520233 PUSL1Q8N0Z8 303 aaKnown RBP14.17□□□□□ -0.14
SDC2-205ENST00000520233 CADM3Q8N126 398 aa14.17□□□□□ -0.14
SDC2-205ENST00000520233 C5orf56Q8N8D9 126 aa14.17□□□□□ -0.14
SDC2-205ENST00000520233 COQ8AQ8NI60 647 aa14.17□□□□□ -0.14
SDC2-205ENST00000520233 VSTM2AQ8TAG5 236 aa14.17□□□□□ -0.14
SDC2-205ENST00000520233 FBXL15Q9H469 300 aa14.17□□□□□ -0.14
SDC2-205ENST00000520233 METTL1Q9UBP6 276 aaKnown RBP14.17□□□□□ -0.14
SDC2-205ENST00000520233 A0A0B4J2A0 478 aa14.16□□□□□ -0.14
SDC2-205ENST00000520233 SAA1P0DJI8 122 aaPredicted RBP14.16□□□□□ -0.14
SDC2-205ENST00000520233 RPL15P61313 204 aaKnown RBP14.16□□□□□ -0.14
SDC2-205ENST00000520233 C5orf64Q2M2E5 130 aa14.16□□□□□ -0.14
SDC2-205ENST00000520233 OR4A47Q6IF82 309 aa14.16□□□□□ -0.14
SDC2-205ENST00000520233 DMBX1Q8NFW5 382 aa14.16□□□□□ -0.14
SDC2-205ENST00000520233 MITD1Q8WV92 249 aa14.16□□□□□ -0.14
SDC2-205ENST00000520233 RASL11BQ9BPW5 248 aa14.16□□□□□ -0.14
SDC2-205ENST00000520233 BET1LQ9NYM9 111 aa14.16□□□□□ -0.14
SDC2-205ENST00000520233 SHPKQ9UHJ6 478 aa14.16□□□□□ -0.14
SDC2-205ENST00000520233 SIGLEC9Q9Y336 463 aa14.16□□□□□ -0.14
SDC2-205ENST00000520233 TEP1Q99973 2627 aaKnown RBP14.16□□□□□ -0.14
SDC2-205ENST00000520233 DUXBA0A1W2PPF3 345 aa14.15□□□□□ -0.14
SDC2-205ENST00000520233 SNRPGP15A8MWD9 76 aa14.15□□□□□ -0.14
SDC2-205ENST00000520233 TRIM77I1YAP6 450 aa14.15□□□□□ -0.14
SDC2-205ENST00000520233 OR2A4O95047 310 aa14.15□□□□□ -0.14
SDC2-205ENST00000520233 IGKV1-5P01602 117 aa14.15□□□□□ -0.14
SDC2-205ENST00000520233 AMY1AP04745 511 aa14.15□□□□□ -0.14
SDC2-205ENST00000520233 IL6RP08887 468 aaPredicted RBP14.15□□□□□ -0.14
SDC2-205ENST00000520233 AKR1C2P52895 323 aa14.15□□□□□ -0.14
SDC2-205ENST00000520233 PLGLAQ15195 96 aa14.15□□□□□ -0.14
SDC2-205ENST00000520233 SLC35G3Q8N808 338 aa14.15□□□□□ -0.14
SDC2-205ENST00000520233 OR4A5Q8NH83 315 aa14.15□□□□□ -0.14
SDC2-205ENST00000520233 OR2A7Q96R45 310 aa14.15□□□□□ -0.14
SDC2-205ENST00000520233 PHB2Q99623 299 aa14.15□□□□□ -0.14
SDC2-205ENST00000520233 TMEM140Q9NV12 185 aa14.15□□□□□ -0.14
SDC2-205ENST00000520233 CREBL2O60519 120 aaPredicted RBP14.14□□□□□ -0.15
SDC2-205ENST00000520233 KBTBD11O94819 623 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms