RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 IL6RP08887 468 aaPredicted RBP4.45□□□□□ -1.7
CTNNA1-216ENST00000519489 PRKACBP22694 351 aa4.45□□□□□ -1.7
CTNNA1-216ENST00000519489 OR2B8PP59922 312 aa4.45□□□□□ -1.7
CTNNA1-216ENST00000519489 WFDC2Q14508 124 aa4.45□□□□□ -1.7
CTNNA1-216ENST00000519489 IRF3Q14653 427 aa4.45□□□□□ -1.7
CTNNA1-216ENST00000519489 FCN2Q15485 313 aa4.45□□□□□ -1.7
CTNNA1-216ENST00000519489 LY6G6FQ5SQ64 297 aa4.45□□□□□ -1.7
CTNNA1-216ENST00000519489 ZNF322Q6U7Q0 402 aaPredicted RBP4.45□□□□□ -1.7
CTNNA1-216ENST00000519489 RASSF6Q6ZTQ3 369 aa4.45□□□□□ -1.7
CTNNA1-216ENST00000519489 SSX6Q7RTT6 188 aa4.45□□□□□ -1.7
CTNNA1-216ENST00000519489 LRRTM1Q86UE6 522 aa4.45□□□□□ -1.7
CTNNA1-216ENST00000519489 Q8N814 137 aa4.45□□□□□ -1.7
CTNNA1-216ENST00000519489 OR13C9Q8NGT0 318 aa4.45□□□□□ -1.7
CTNNA1-216ENST00000519489 RP9Q8TA86 221 aaKnown RBP4.45□□□□□ -1.7
CTNNA1-216ENST00000519489 PP6455Q8WZ26 134 aa4.45□□□□□ -1.7
CTNNA1-216ENST00000519489 SPSB1Q96BD6 273 aa4.45□□□□□ -1.7
CTNNA1-216ENST00000519489 OR2A7Q96R45 310 aa4.45□□□□□ -1.7
CTNNA1-216ENST00000519489 YIPF3Q9GZM5 350 aa4.45□□□□□ -1.7
CTNNA1-216ENST00000519489 ZNF430Q9H8G1 570 aaPredicted RBP4.45□□□□□ -1.7
CTNNA1-216ENST00000519489 MOB1AQ9H8S9 216 aa4.45□□□□□ -1.7
CTNNA1-216ENST00000519489 ENOPH1Q9UHY7 261 aa4.45□□□□□ -1.7
CTNNA1-216ENST00000519489 JPT1Q9UK76 154 aa4.45□□□□□ -1.7
CTNNA1-216ENST00000519489 TRAPPC2LQ9UL33 140 aa4.45□□□□□ -1.7
CTNNA1-216ENST00000519489 FCGBPQ9Y6R7 5405 aaPredicted RBP4.45□□□□□ -1.7
CTNNA1-216ENST00000519489 IGLV11-55A0A075B6I3 123 aa4.44□□□□□ -1.7
CTNNA1-216ENST00000519489 A0A1W2PP11 408 aa4.44□□□□□ -1.7
CTNNA1-216ENST00000519489 RIIAD1A6NNX1 92 aa4.44□□□□□ -1.7
CTNNA1-216ENST00000519489 RAB29O14966 203 aa4.44□□□□□ -1.7
CTNNA1-216ENST00000519489 OR7C1O76099 320 aaPredicted RBP4.44□□□□□ -1.7
CTNNA1-216ENST00000519489 RPP14O95059 124 aaKnown RBP4.44□□□□□ -1.7
CTNNA1-216ENST00000519489 SERPINA3P01011 423 aa4.44□□□□□ -1.7
CTNNA1-216ENST00000519489 MT-ND2P03891 347 aa4.44□□□□□ -1.7
CTNNA1-216ENST00000519489 MAS1P04201 325 aa4.44□□□□□ -1.7
CTNNA1-216ENST00000519489 CD300CQ08708 224 aa4.44□□□□□ -1.7
CTNNA1-216ENST00000519489 C6orf183Q5T699 404 aa4.44□□□□□ -1.7
CTNNA1-216ENST00000519489 PLET1Q6UQ28 207 aa4.44□□□□□ -1.7
CTNNA1-216ENST00000519489 TCF24Q7RTU0 167 aa4.44□□□□□ -1.7
CTNNA1-216ENST00000519489 CBR4Q8N4T8 237 aa4.44□□□□□ -1.7
CTNNA1-216ENST00000519489 OR2T12Q8NG77 320 aa4.44□□□□□ -1.7
CTNNA1-216ENST00000519489 OR2AK2Q8NG84 335 aa4.44□□□□□ -1.7
CTNNA1-216ENST00000519489 OR8J3Q8NGG0 315 aa4.44□□□□□ -1.7
CTNNA1-216ENST00000519489 C5orf30Q96GV9 206 aa4.44□□□□□ -1.7
CTNNA1-216ENST00000519489 LINC01600Q96MT4 127 aa4.44□□□□□ -1.7
CTNNA1-216ENST00000519489 PPCSQ9HAB8 311 aa4.44□□□□□ -1.7
CTNNA1-216ENST00000519489 DNAJC4Q9NNZ3 241 aa4.44□□□□□ -1.7
CTNNA1-216ENST00000519489 ZNF257Q9Y2Q1 563 aa4.44□□□□□ -1.7
CTNNA1-216ENST00000519489 TRBV7-1A0A0A6YYK4 115 aa4.43□□□□□ -1.7
CTNNA1-216ENST00000519489 TEX48A0A1B0GUV7 120 aa4.43□□□□□ -1.7
CTNNA1-216ENST00000519489 UBE2QL1A1L167 161 aa4.43□□□□□ -1.7
CTNNA1-216ENST00000519489 OR2T8A6NH00 312 aa4.43□□□□□ -1.7
CTNNA1-216ENST00000519489 LINC00473A8K010 186 aa4.43□□□□□ -1.7
CTNNA1-216ENST00000519489 NPIPB5A8MRT5 1133 aa4.43□□□□□ -1.7
CTNNA1-216ENST00000519489 ANGPT2O15123 496 aa4.43□□□□□ -1.7
CTNNA1-216ENST00000519489 GADD45GO95257 159 aa4.43□□□□□ -1.7
CTNNA1-216ENST00000519489 ZNF688P0C7X2 276 aa4.43□□□□□ -1.7
CTNNA1-216ENST00000519489 DBTP11182 482 aaKnown RBP4.43□□□□□ -1.7
CTNNA1-216ENST00000519489 ALDH3B2P48448 385 aa4.43□□□□□ -1.7
CTNNA1-216ENST00000519489 RBM11P57052 281 aaKnown RBP4.43□□□□□ -1.7
CTNNA1-216ENST00000519489 FXYD7P58549 80 aa4.43□□□□□ -1.7
CTNNA1-216ENST00000519489 KISS1Q15726 138 aa4.43□□□□□ -1.7
CTNNA1-216ENST00000519489 PDPNQ86YL7 162 aa4.43□□□□□ -1.7
CTNNA1-216ENST00000519489 CPOQ8IVL8 374 aa4.43□□□□□ -1.7
CTNNA1-216ENST00000519489 C1orf158Q8N1D5 194 aa4.43□□□□□ -1.7
CTNNA1-216ENST00000519489 TMEM116Q8NCL8 245 aa4.43□□□□□ -1.7
CTNNA1-216ENST00000519489 OR2T33Q8NG76 320 aa4.43□□□□□ -1.7
CTNNA1-216ENST00000519489 OR51A4Q8NGJ6 313 aa4.43□□□□□ -1.7
CTNNA1-216ENST00000519489 ACOT12Q8WYK0 555 aa4.43□□□□□ -1.7
CTNNA1-216ENST00000519489 FCGR1BQ92637 280 aa4.43□□□□□ -1.7
CTNNA1-216ENST00000519489 C16orf92Q96LL3 132 aa4.43□□□□□ -1.7
CTNNA1-216ENST00000519489 RAB40CQ96S21 281 aa4.43□□□□□ -1.7
CTNNA1-216ENST00000519489 CMTM6Q9NX76 183 aa4.43□□□□□ -1.7
CTNNA1-216ENST00000519489 SMPD3Q9NY59 655 aaPredicted RBP4.43□□□□□ -1.7
CTNNA1-216ENST00000519489 PIPOXQ9P0Z9 390 aa4.43□□□□□ -1.7
CTNNA1-216ENST00000519489 ST3GAL6Q9Y274 331 aa4.43□□□□□ -1.7
CTNNA1-216ENST00000519489 IGHV3-66A0A0C4DH42 116 aa4.42□□□□□ -1.7
CTNNA1-216ENST00000519489 LOC102723971A0A1B0GUV8 181 aa4.42□□□□□ -1.7
CTNNA1-216ENST00000519489 SMIM9A6NGZ8 99 aa4.42□□□□□ -1.7
CTNNA1-216ENST00000519489 CGB1A6NKQ9 187 aa4.42□□□□□ -1.7
CTNNA1-216ENST00000519489 K7EQG2 157 aa4.42□□□□□ -1.7
CTNNA1-216ENST00000519489 NDUFA4O00483 81 aa4.42□□□□□ -1.7
CTNNA1-216ENST00000519489 GABRPO00591 440 aa4.42□□□□□ -1.7
CTNNA1-216ENST00000519489 SIVA1O15304 175 aa4.42□□□□□ -1.7
CTNNA1-216ENST00000519489 NUPL2O15504 423 aaKnown RBP4.42□□□□□ -1.7
CTNNA1-216ENST00000519489 IFNGP01579 166 aa4.42□□□□□ -1.7
CTNNA1-216ENST00000519489 DEFB130BP0DP73 79 aa4.42□□□□□ -1.7
CTNNA1-216ENST00000519489 DEFB130AP0DP74 79 aa4.42□□□□□ -1.7
CTNNA1-216ENST00000519489 GNRHRP30968 328 aa4.42□□□□□ -1.7
CTNNA1-216ENST00000519489 DEFB1P60022 68 aa4.42□□□□□ -1.7
CTNNA1-216ENST00000519489 CXCR4P61073 352 aa4.42□□□□□ -1.7
CTNNA1-216ENST00000519489 SAMD4BQ5PRF9 694 aaKnown RBP4.42□□□□□ -1.7
CTNNA1-216ENST00000519489 CGB2Q6NT52 195 aa4.42□□□□□ -1.7
CTNNA1-216ENST00000519489 RPL13AP3Q6NVV1 102 aa4.42□□□□□ -1.7
CTNNA1-216ENST00000519489 BCDIN3DQ7Z5W3 292 aaKnown RBP4.42□□□□□ -1.7
CTNNA1-216ENST00000519489 PXT1Q8NFP0 134 aa4.42□□□□□ -1.7
CTNNA1-216ENST00000519489 ST8SIA2Q92186 375 aa4.42□□□□□ -1.7
CTNNA1-216ENST00000519489 HARBI1Q96MB7 349 aa4.42□□□□□ -1.7
CTNNA1-216ENST00000519489 C11orf54Q9H0W9 315 aaPredicted RBP4.42□□□□□ -1.7
CTNNA1-216ENST00000519489 FAM32AQ9Y421 112 aaKnown RBP4.42□□□□□ -1.7
CTNNA1-216ENST00000519489 A0A0J9YY99 117 aa4.41□□□□□ -1.7
CTNNA1-216ENST00000519489 PLAC8L1A1L4L8 177 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms